Gene annotation
Transcriptome id Sobic.002G257200.1
Synonym UK/UPRT1, Sb02g029240, UKL1, ATUK/UPRT1
Functional annotation uridine/cytidine kinase-like 1, putative, expressed
UniProt C5X4P8
Pfam PF13238 PF14681
Panther DB PTHR10285 PTHR10285:SF82
NCBI CDD -
KEGG Orthology K00876; udk, uridine kinase
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G27190 : uridine kinase-like 2
RAP-DB (Rice) LOC_Os09g32820.1 : uridine/cytidine kinase-like 1, putative, expressed
MaizeGDB (Corn) Zm00025a014299 , Zm00025a025766
Brachypodium KQJ90919 , KQJ99105
Barley HORVU5Hr1G076150.22 , HORVU5Hr1G076150.21 , HORVU5Hr1G076150.20 , HORVU5Hr1G076150.1 , HORVU5Hr1G076150.9 , HORVU5Hr1G076150.4 , HORVU5Hr1G076150.5 , HORVU5Hr1G076150.6 , HORVU5Hr1G076150.7 , HORVU5Hr1G076150.2 , HORVU5Hr1G076150.3 , HORVU5Hr1G076150.16 , HORVU5Hr1G076150.17 , HORVU5Hr1G076150.14 , HORVU5Hr1G076150.15 , HORVU5Hr1G076150.12 , HORVU5Hr1G076150.13 , HORVU5Hr1G076150.11 , HORVU5Hr1G076150.18 , HORVU5Hr1G076150.19 , HORVU7Hr1G053940.8 , HORVU7Hr1G053940.9 , HORVU7Hr1G053940.1 , HORVU7Hr1G053940.2 , HORVU7Hr1G053940.4 , HORVU7Hr1G053940.5 , HORVU7Hr1G053940.6 , HORVU7Hr1G053940.7 , HORVU7Hr1G053940.12 , HORVU7Hr1G053940.13 , HORVU7Hr1G053940.10 , HORVU7Hr1G053940.11 , HORVU7Hr1G053940.16 , HORVU7Hr1G053940.17 , HORVU7Hr1G053940.14 , HORVU7Hr1G053940.15
Wheat TraesCS5A02G285300 , TraesCS7A02G259200 , TraesCS7B02G157000 , TraesCS7B02G157000 , TraesCS7A02G259200 , TraesCS7A02G259200 , TraesCS7D02G260200 , TraesCS7D02G260200 , TraesCS7D02G260200 , TraesCS5B02G284500 , TraesCS5D02G292700 , TraesCS5D02G292700
Populus -


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cDNA sequences
Sobic.002G257200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G425800 src homology-3 domain protein 3, putative, expressed -
2 Sobic.005G158300 RWD domain containing protein, expressed K10640: RNF25, E3 ubiquitin-protein ligase RNF25
3 Sobic.004G226600 expressed protein -
4 Sobic.003G316700 katanin p80 WD40 repeat-containing subunit B1 homolog 1, putative, expressed K18643: katanin p80 WD40 repeat-containing subunit B1
5 Sobic.010G009800 OsFBX182 - F-box domain containing protein, expressed -
6 Sobic.004G316700 MYB family transcription factor, putative, expressed -
7 Sobic.004G325600 Putative splicing factor(PubMedID : 24356560)@RNA recognition motif containing protein, expressed K12896: splicing factor, arginine/serine-rich 7
8 Sobic.004G286500 DHHC zinc finger domain containing protein, expressed K18932: palmitoyltransferase
9 Sobic.003G273500 expressed protein -
10 Sobic.001G226700 WD repeat-containing protein, putative, expressed -
11 Sobic.007G165900 ubiquitin carboxyl-terminal hydrolase, family 1, putative, expressed K05610: UCHL5, ubiquitin carboxyl-terminal hydrolase L5
12 Sobic.010G219100 protein kinase APK1B, chloroplast precursor, putative, expressed -
13 Sobic.004G311900 STE_MEKK_ste11_MAP3K.12 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed K13414: mitogen-activated protein kinase kinase kinase 1
14 Sobic.009G050700 importin subunit alpha, putative, expressed -
15 Sobic.008G124900 heat shock protein DnaJ, putative, expressed -
16 Sobic.001G015800 serine/threonine protein phosphatase 2A 59 kDa regulatory subunit Bgamma isoform, putative, expressed K11584: serine/threonine-protein phosphatase 2A regulatory subunit B'
17 Sobic.002G148300 - -
18 Sobic.003G119700 zinc finger, C3HC4 type domain containing protein, expressed -
19 Sobic.001G420800 DHHC zinc finger domain containing protein, expressed K18932: palmitoyltransferase
20 Sobic.003G421201 - K00844: hexokinase


Gene co-expression network
sample Sobic002G257200 Sobic002G257200 Sobic001G425800 Sobic001G425800 Sobic002G257200--Sobic001G425800 Sobic005G158300 Sobic005G158300 Sobic002G257200--Sobic005G158300 Sobic004G226600 Sobic004G226600 Sobic002G257200--Sobic004G226600 Sobic003G316700 Sobic003G316700 Sobic002G257200--Sobic003G316700 Sobic010G009800 Sobic010G009800 Sobic002G257200--Sobic010G009800 Sobic004G316700 Sobic004G316700 Sobic002G257200--Sobic004G316700 Sobic004G325600 Sobic004G325600 Sobic002G257200--Sobic004G325600 Sobic004G286500 Sobic004G286500 Sobic002G257200--Sobic004G286500 Sobic003G273500 Sobic003G273500 Sobic002G257200--Sobic003G273500 Sobic002G134600 Sobic002G134600 Sobic001G425800--Sobic002G134600 Sobic010G223700 Sobic010G223700 Sobic001G425800--Sobic010G223700 Sobic007G006900 Sobic007G006900 Sobic001G425800--Sobic007G006900 Sobic008G046500 Sobic008G046500 Sobic001G425800--Sobic008G046500 Sobic010G249100 Sobic010G249100 Sobic001G425800--Sobic010G249100 Sobic001G226700 Sobic001G226700 Sobic001G425800--Sobic001G226700 Sobic001G425800--Sobic002G257200 Sobic004G146800 Sobic004G146800 Sobic001G425800--Sobic004G146800 Sobic008G124900 Sobic008G124900 Sobic001G425800--Sobic008G124900 Sobic009G131900 Sobic009G131900 Sobic005G158300--Sobic009G131900 Sobic005G160400 Sobic005G160400 Sobic005G158300--Sobic005G160400 Sobic005G158300--Sobic008G124900 Sobic009G092400 Sobic009G092400 Sobic005G158300--Sobic009G092400 Sobic010G209000 Sobic010G209000 Sobic005G158300--Sobic010G209000 Sobic004G252900 Sobic004G252900 Sobic005G158300--Sobic004G252900 Sobic002G047700 Sobic002G047700 Sobic005G158300--Sobic002G047700 Sobic006G180000 Sobic006G180000 Sobic005G158300--Sobic006G180000 Sobic003G121300 Sobic003G121300 Sobic005G158300--Sobic003G121300 Sobic004G226600--Sobic004G286500 Sobic004G226600--Sobic010G249100 Sobic004G226600--Sobic003G273500 Sobic003G187200 Sobic003G187200 Sobic004G226600--Sobic003G187200 Sobic007G118200 Sobic007G118200 Sobic004G226600--Sobic007G118200 Sobic003G289400 Sobic003G289400 Sobic004G226600--Sobic003G289400 Sobic010G204400 Sobic010G204400 Sobic004G226600--Sobic010G204400 Sobic004G226600--Sobic001G425800 Sobic006G163800 Sobic006G163800 Sobic004G226600--Sobic006G163800 Sobic001G386300 Sobic001G386300 Sobic003G316700--Sobic001G386300 Sobic003G316700--Sobic001G425800 Sobic001G031100 Sobic001G031100 Sobic003G316700--Sobic001G031100 Sobic002G358400 Sobic002G358400 Sobic003G316700--Sobic002G358400 Sobic001G332500 Sobic001G332500 Sobic003G316700--Sobic001G332500 Sobic003G316700--Sobic002G257200 Sobic003G316700--Sobic004G146800 Sobic004G203400 Sobic004G203400 Sobic003G316700--Sobic004G203400 Sobic009G200800 Sobic009G200800 Sobic003G316700--Sobic009G200800 Sobic007G165900 Sobic007G165900 Sobic010G009800--Sobic007G165900 Sobic003G379200 Sobic003G379200 Sobic010G009800--Sobic003G379200 Sobic003G104000 Sobic003G104000 Sobic010G009800--Sobic003G104000 Sobic006G261400 Sobic006G261400 Sobic010G009800--Sobic006G261400 Sobic001G395100 Sobic001G395100 Sobic010G009800--Sobic001G395100 Sobic002G052700 Sobic002G052700 Sobic010G009800--Sobic002G052700 Sobic001G515000 Sobic001G515000 Sobic010G009800--Sobic001G515000 Sobic001G096000 Sobic001G096000 Sobic010G009800--Sobic001G096000 Sobic010G009800--Sobic008G124900 Sobic004G316700--Sobic009G131900 Sobic006G131000 Sobic006G131000 Sobic004G316700--Sobic006G131000 Sobic004G316700--Sobic004G286500 Sobic003G119700 Sobic003G119700 Sobic004G316700--Sobic003G119700 Sobic003G150100 Sobic003G150100 Sobic004G316700--Sobic003G150100 Sobic006G174850 Sobic006G174850 Sobic004G316700--Sobic006G174850 Sobic004G316700--Sobic008G046500 Sobic002G117400 Sobic002G117400 Sobic004G316700--Sobic002G117400 Sobic004G323700 Sobic004G323700 Sobic004G316700--Sobic004G323700 Sobic001G527300 Sobic001G527300 Sobic004G325600--Sobic001G527300 Sobic001G291800 Sobic001G291800 Sobic004G325600--Sobic001G291800 Sobic008G147200 Sobic008G147200 Sobic004G325600--Sobic008G147200 Sobic004G133700 Sobic004G133700 Sobic004G325600--Sobic004G133700 Sobic002G145800 Sobic002G145800 Sobic004G325600--Sobic002G145800 Sobic005G114400 Sobic005G114400 Sobic004G325600--Sobic005G114400 Sobic004G325600--Sobic002G257200 Sobic004G325600--Sobic010G009800 Sobic008G057000 Sobic008G057000 Sobic004G325600--Sobic008G057000 Sobic004G286500--Sobic001G515000 Sobic004G286500--Sobic008G046500 Sobic004G286500--Sobic006G163800 Sobic004G286500--Sobic003G187200 Sobic010G053800 Sobic010G053800 Sobic004G286500--Sobic010G053800 Sobic001G143500 Sobic001G143500 Sobic004G286500--Sobic001G143500 Sobic007G027700 Sobic007G027700 Sobic004G286500--Sobic007G027700 Sobic006G012500 Sobic006G012500 Sobic004G286500--Sobic006G012500 Sobic001G094900 Sobic001G094900 Sobic004G286500--Sobic001G094900 Sobic003G273500--Sobic003G187200 Sobic003G273500--Sobic004G286500 Sobic003G273500--Sobic004G323700 Sobic001G061700 Sobic001G061700 Sobic003G273500--Sobic001G061700 Sobic003G273500--Sobic006G163800 Sobic003G273500--Sobic004G226600 Sobic006G008600 Sobic006G008600 Sobic003G273500--Sobic006G008600 Sobic003G273500--Sobic003G119700 Sobic010G074900 Sobic010G074900 Sobic003G273500--Sobic010G074900
Octagon: transcription factors


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