Gene annotation
Transcriptome id Sobic.004G316700.1,Sobic.004G316700.2
Synonym Sb04g034770, TRFL6
Functional annotation MYB family transcription factor, putative, expressed
UniProt A0A194YSQ0 , A0A194YSP1
Pfam -
Panther DB PTHR21717 PTHR21717:SF25
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G72650 : TRF-like 6
RAP-DB (Rice) LOC_Os02g53670.1 : MYB family transcription factor, putative, expressed
MaizeGDB (Corn) Zm00025a022313
Brachypodium KQK01645
Barley HORVU3Hr1G092220.6 , HORVU3Hr1G092220.7 , HORVU3Hr1G092220.4 , HORVU3Hr1G092220.5 , HORVU3Hr1G092220.2 , HORVU3Hr1G092220.3 , HORVU3Hr1G092220.1 , HORVU3Hr1G092220.8
Wheat TraesCS3D02G408600 , TraesCS3B02G448900 , TraesCS3D02G408600 , TraesCS3D02G408600 , TraesCS3D02G408600 , TraesCS3A02G414100 , TraesCS3A02G414100 , TraesCS3A02G414100 , TraesCS3A02G414100
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G131900 - K18177: cytochrome c oxidase assembly factor 4
2 Sobic.006G131000 expressed protein K11968: ariadne-1
3 Sobic.004G286500 DHHC zinc finger domain containing protein, expressed K18932: palmitoyltransferase
4 Sobic.003G119700 zinc finger, C3HC4 type domain containing protein, expressed -
5 Sobic.003G150100 expressed protein -
6 Sobic.006G174850 - K15193: SPTY2D1, protein SPT2
7 Sobic.008G046500 Cellular calcium signals(PubMedID : 19860013)@calcineurin B, putative, expressed K06268: PPP3R, serine/threonine-protein phosphatase 2B regulatory subunit
8 Sobic.002G117400 expressed protein -
9 Sobic.004G323700 zinc finger family protein, putative, expressed -
10 Sobic.006G163800 diacylglycerol kinase, putative, expressed -
11 Sobic.001G477700 WD domain, G-beta repeat domain containing protein, expressed K11807: WDTC1, WD and tetratricopeptide repeats protein 1
12 Sobic.006G261400 peptidase, trypsin-like serine and cysteine proteases, putative, expressed -
13 Sobic.008G124900 heat shock protein DnaJ, putative, expressed -
14 Sobic.003G104000 expressed protein K15133: mediator of RNA polymerase II transcription subunit 17
15 Sobic.007G042900 BSD domain-containing protein, putative, expressed K03141: TFIIH1, GTF2H1, transcription initiation factor TFIIH subunit 1
16 Sobic.003G182300 zinc finger family protein, putative, expressed K16284: E3 ubiquitin-protein ligase SIS3
17 Sobic.006G267600 elongation factor Tu, putative, expressed K14416: elongation factor 1 alpha-like protein
18 Sobic.001G294300 Cellular calcium signals(PubMedID : 19860013)@calcineurin B, putative, expressed K06268: PPP3R, serine/threonine-protein phosphatase 2B regulatory subunit
19 Sobic.001G361300 CDPK - calcium/calmodulin dependent serine/threonine protein kinase 1(PubMedID : 31721651)@CAMK_CAMK_like.18 - CAMK includes calcium/calmodulin depedent protein kinases, expressed -
20 Sobic.008G083200 transcription factor, putative, expressed K09060: plant G-box-binding factor


Gene co-expression network
sample Sobic004G316700 Sobic004G316700 Sobic009G131900 Sobic009G131900 Sobic004G316700--Sobic009G131900 Sobic006G131000 Sobic006G131000 Sobic004G316700--Sobic006G131000 Sobic004G286500 Sobic004G286500 Sobic004G316700--Sobic004G286500 Sobic003G119700 Sobic003G119700 Sobic004G316700--Sobic003G119700 Sobic003G150100 Sobic003G150100 Sobic004G316700--Sobic003G150100 Sobic006G174850 Sobic006G174850 Sobic004G316700--Sobic006G174850 Sobic008G046500 Sobic008G046500 Sobic004G316700--Sobic008G046500 Sobic002G117400 Sobic002G117400 Sobic004G316700--Sobic002G117400 Sobic004G323700 Sobic004G323700 Sobic004G316700--Sobic004G323700 Sobic003G104000 Sobic003G104000 Sobic009G131900--Sobic003G104000 Sobic006G270600 Sobic006G270600 Sobic009G131900--Sobic006G270600 Sobic009G131900--Sobic004G316700 Sobic007G042900 Sobic007G042900 Sobic009G131900--Sobic007G042900 Sobic003G182300 Sobic003G182300 Sobic009G131900--Sobic003G182300 Sobic010G235200 Sobic010G235200 Sobic009G131900--Sobic010G235200 Sobic009G131900--Sobic006G131000 Sobic008G129600 Sobic008G129600 Sobic009G131900--Sobic008G129600 Sobic010G264000 Sobic010G264000 Sobic009G131900--Sobic010G264000 Sobic007G218000 Sobic007G218000 Sobic006G131000--Sobic007G218000 Sobic007G132100 Sobic007G132100 Sobic006G131000--Sobic007G132100 Sobic006G163800 Sobic006G163800 Sobic006G131000--Sobic006G163800 Sobic004G039600 Sobic004G039600 Sobic006G131000--Sobic004G039600 Sobic001G096000 Sobic001G096000 Sobic006G131000--Sobic001G096000 Sobic006G131000--Sobic006G174850 Sobic010G275500 Sobic010G275500 Sobic006G131000--Sobic010G275500 Sobic001G369000 Sobic001G369000 Sobic006G131000--Sobic001G369000 Sobic004G178200 Sobic004G178200 Sobic006G131000--Sobic004G178200 Sobic001G515000 Sobic001G515000 Sobic004G286500--Sobic001G515000 Sobic004G286500--Sobic008G046500 Sobic004G286500--Sobic006G163800 Sobic003G187200 Sobic003G187200 Sobic004G286500--Sobic003G187200 Sobic010G053800 Sobic010G053800 Sobic004G286500--Sobic010G053800 Sobic001G143500 Sobic001G143500 Sobic004G286500--Sobic001G143500 Sobic007G027700 Sobic007G027700 Sobic004G286500--Sobic007G027700 Sobic006G012500 Sobic006G012500 Sobic004G286500--Sobic006G012500 Sobic001G094900 Sobic001G094900 Sobic004G286500--Sobic001G094900 Sobic008G124900 Sobic008G124900 Sobic003G119700--Sobic008G124900 Sobic001G294300 Sobic001G294300 Sobic003G119700--Sobic001G294300 Sobic003G119700--Sobic006G131000 Sobic007G093800 Sobic007G093800 Sobic003G119700--Sobic007G093800 Sobic001G441400 Sobic001G441400 Sobic003G119700--Sobic001G441400 Sobic003G119700--Sobic001G096000 Sobic010G278200 Sobic010G278200 Sobic003G119700--Sobic010G278200 Sobic003G119700--Sobic008G046500 Sobic001G451400 Sobic001G451400 Sobic003G119700--Sobic001G451400 Sobic010G226000 Sobic010G226000 Sobic003G150100--Sobic010G226000 Sobic003G150100--Sobic004G316700 Sobic003G379200 Sobic003G379200 Sobic003G150100--Sobic003G379200 Sobic003G272700 Sobic003G272700 Sobic003G150100--Sobic003G272700 Sobic009G228000 Sobic009G228000 Sobic003G150100--Sobic009G228000 Sobic006G088200 Sobic006G088200 Sobic003G150100--Sobic006G088200 Sobic003G150100--Sobic006G174850 Sobic003G212900 Sobic003G212900 Sobic003G150100--Sobic003G212900 Sobic007G223000 Sobic007G223000 Sobic003G150100--Sobic007G223000 Sobic006G174850--Sobic007G218000 Sobic006G174850--Sobic006G131000 Sobic009G044800 Sobic009G044800 Sobic006G174850--Sobic009G044800 Sobic001G273700 Sobic001G273700 Sobic006G174850--Sobic001G273700 Sobic006G174850--Sobic003G379200 Sobic005G062200 Sobic005G062200 Sobic006G174850--Sobic005G062200 Sobic001G263600 Sobic001G263600 Sobic006G174850--Sobic001G263600 Sobic006G174850--Sobic007G132100 Sobic006G240100 Sobic006G240100 Sobic006G174850--Sobic006G240100 Sobic001G007000 Sobic001G007000 Sobic008G046500--Sobic001G007000 Sobic006G200600 Sobic006G200600 Sobic008G046500--Sobic006G200600 Sobic001G389100 Sobic001G389100 Sobic008G046500--Sobic001G389100 Sobic008G046500--Sobic007G093800 Sobic010G251000 Sobic010G251000 Sobic008G046500--Sobic010G251000 Sobic004G092500 Sobic004G092500 Sobic008G046500--Sobic004G092500 Sobic008G046500--Sobic004G286500 Sobic009G068500 Sobic009G068500 Sobic008G046500--Sobic009G068500 Sobic003G102400 Sobic003G102400 Sobic008G046500--Sobic003G102400 Sobic002G117400--Sobic004G323700 Sobic002G117400--Sobic007G093800 Sobic007G167900 Sobic007G167900 Sobic002G117400--Sobic007G167900 Sobic010G020400 Sobic010G020400 Sobic002G117400--Sobic010G020400 Sobic002G303600 Sobic002G303600 Sobic002G117400--Sobic002G303600 Sobic002G008800 Sobic002G008800 Sobic002G117400--Sobic002G008800 Sobic008G083200 Sobic008G083200 Sobic002G117400--Sobic008G083200 Sobic010G020300 Sobic010G020300 Sobic002G117400--Sobic010G020300 Sobic009G192000 Sobic009G192000 Sobic002G117400--Sobic009G192000 Sobic004G323700--Sobic002G117400 Sobic004G323700--Sobic007G218000 Sobic004G323700--Sobic002G303600 Sobic010G261600 Sobic010G261600 Sobic004G323700--Sobic010G261600 Sobic004G228800 Sobic004G228800 Sobic004G323700--Sobic004G228800 Sobic004G323700--Sobic010G278200 Sobic004G323700--Sobic006G174850 Sobic004G323700--Sobic006G131000 Sobic004G323700--Sobic004G039600
Octagon: transcription factors


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