Gene annotation
Transcriptome id Sobic.002G117400.1,Sobic.002G117400.2,Sobic.002G117400.3
Synonym Sb02g010020
Functional annotation expressed protein
UniProt C5X4F2 , A0A1B6QAL8
Pfam PF07800
Panther DB PTHR31197 PTHR31197:SF7
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G24740 : Protein of unknown function (DUF1644)
RAP-DB (Rice) LOC_Os07g23790.5,LOC_Os07g23790.3 : expressed protein
MaizeGDB (Corn) Zm00025a045736
Brachypodium KQK20107
Barley -
Wheat TraesCS1B02G248200 , TraesCS1B02G248200
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G323700 zinc finger family protein, putative, expressed -
2 Sobic.007G093800 expressed protein -
3 Sobic.007G167900 signal peptide peptidase domain containing protein, expressed K09598: signal peptide peptidase-like 3
4 Sobic.010G020400 HEAT repeat family protein, putative, expressed K03456: serine/threonine-protein phosphatase 2A regulatory subunit A
5 Sobic.002G303600 -(PubMedID : 29147737)@RIN3, putative, expressed K10636: AMFR, autocrine motility factor receptor
6 Sobic.002G008800 PTEN, putative, expressed K01110: phosphatidylinositol-3,4,5-trisphosphate 3-phosphatase and dual-specificity protein phosphatase PTEN
7 Sobic.008G083200 transcription factor, putative, expressed K09060: plant G-box-binding factor
8 Sobic.010G020300 spastin, putative, expressed K13254: spastin
9 Sobic.009G192000 transcription initiation factor IIF beta subunit, putative, expressed K03139: TFIIF2, GTF2F2, transcription initiation factor TFIIF subunit beta
10 Sobic.003G422900 RNA recognition motif containing protein, putative, expressed K14411: RNA-binding protein Musashi
11 Sobic.006G180000 syntaxin-18, putative, expressed K08492: syntaxin 18
12 Sobic.003G155900 mov34/MPN/PAD-1 family protein, expressed K11866: STAMBP, STAM-binding protein
13 Sobic.010G223300 CDP-alcohol phosphatidyltransferase, putative, expressed K00999: CDP-diacylglycerol--inositol 3-phosphatidyltransferase
14 Sobic.008G046500 Cellular calcium signals(PubMedID : 19860013)@calcineurin B, putative, expressed K06268: PPP3R, serine/threonine-protein phosphatase 2B regulatory subunit
15 Sobic.006G187100 ubiquitin fusion degradation protein, putative, expressed K14016: ubiquitin fusion degradation protein 1
16 Sobic.001G382600 expressed protein -
17 Sobic.004G092500 OsPP2Ac-1 - Phosphatase 2A isoform 1 belonging to family 1, expressed K04382: serine/threonine-protein phosphatase 2A catalytic subunit
18 Sobic.010G261600 ubiquitin interaction motif family protein, expressed -
19 Sobic.001G428800 vacuolar sorting protein, putative, expressed -
20 Sobic.007G132100 myrosinase precursor, putative, expressed -


Gene co-expression network
sample Sobic002G117400 Sobic002G117400 Sobic004G323700 Sobic004G323700 Sobic002G117400--Sobic004G323700 Sobic007G093800 Sobic007G093800 Sobic002G117400--Sobic007G093800 Sobic007G167900 Sobic007G167900 Sobic002G117400--Sobic007G167900 Sobic010G020400 Sobic010G020400 Sobic002G117400--Sobic010G020400 Sobic002G303600 Sobic002G303600 Sobic002G117400--Sobic002G303600 Sobic002G008800 Sobic002G008800 Sobic002G117400--Sobic002G008800 Sobic008G083200 Sobic008G083200 Sobic002G117400--Sobic008G083200 Sobic010G020300 Sobic010G020300 Sobic002G117400--Sobic010G020300 Sobic009G192000 Sobic009G192000 Sobic002G117400--Sobic009G192000 Sobic004G323700--Sobic002G117400 Sobic007G218000 Sobic007G218000 Sobic004G323700--Sobic007G218000 Sobic004G323700--Sobic002G303600 Sobic010G261600 Sobic010G261600 Sobic004G323700--Sobic010G261600 Sobic004G228800 Sobic004G228800 Sobic004G323700--Sobic004G228800 Sobic010G278200 Sobic010G278200 Sobic004G323700--Sobic010G278200 Sobic006G174850 Sobic006G174850 Sobic004G323700--Sobic006G174850 Sobic006G131000 Sobic006G131000 Sobic004G323700--Sobic006G131000 Sobic004G039600 Sobic004G039600 Sobic004G323700--Sobic004G039600 Sobic008G124900 Sobic008G124900 Sobic007G093800--Sobic008G124900 Sobic007G093800--Sobic006G131000 Sobic004G178200 Sobic004G178200 Sobic007G093800--Sobic004G178200 Sobic009G068500 Sobic009G068500 Sobic007G093800--Sobic009G068500 Sobic008G046500 Sobic008G046500 Sobic007G093800--Sobic008G046500 Sobic007G093800--Sobic010G278200 Sobic003G264100 Sobic003G264100 Sobic007G093800--Sobic003G264100 Sobic004G092500 Sobic004G092500 Sobic007G093800--Sobic004G092500 Sobic007G093800--Sobic007G218000 Sobic001G085100 Sobic001G085100 Sobic007G167900--Sobic001G085100 Sobic007G167900--Sobic009G192000 Sobic007G167900--Sobic004G092500 Sobic001G206900 Sobic001G206900 Sobic007G167900--Sobic001G206900 Sobic002G047700 Sobic002G047700 Sobic007G167900--Sobic002G047700 Sobic006G101700 Sobic006G101700 Sobic007G167900--Sobic006G101700 Sobic007G167900--Sobic010G020400 Sobic009G222500 Sobic009G222500 Sobic007G167900--Sobic009G222500 Sobic001G341500 Sobic001G341500 Sobic007G167900--Sobic001G341500 Sobic002G020700 Sobic002G020700 Sobic010G020400--Sobic002G020700 Sobic001G049400 Sobic001G049400 Sobic010G020400--Sobic001G049400 Sobic003G338500 Sobic003G338500 Sobic010G020400--Sobic003G338500 Sobic001G014800 Sobic001G014800 Sobic010G020400--Sobic001G014800 Sobic010G020400--Sobic002G008800 Sobic008G055900 Sobic008G055900 Sobic010G020400--Sobic008G055900 Sobic008G033500 Sobic008G033500 Sobic010G020400--Sobic008G033500 Sobic001G333100 Sobic001G333100 Sobic010G020400--Sobic001G333100 Sobic010G223300 Sobic010G223300 Sobic010G020400--Sobic010G223300 Sobic002G303600--Sobic010G261600 Sobic002G303600--Sobic004G323700 Sobic002G303600--Sobic004G178200 Sobic006G180000 Sobic006G180000 Sobic002G303600--Sobic006G180000 Sobic002G303600--Sobic007G218000 Sobic004G028100 Sobic004G028100 Sobic002G303600--Sobic004G028100 Sobic003G422900 Sobic003G422900 Sobic002G303600--Sobic003G422900 Sobic009G092400 Sobic009G092400 Sobic002G303600--Sobic009G092400 Sobic004G003401 Sobic004G003401 Sobic002G303600--Sobic004G003401 Sobic002G008800--Sobic010G261600 Sobic002G008800--Sobic010G020400 Sobic002G262900 Sobic002G262900 Sobic002G008800--Sobic002G262900 Sobic002G008800--Sobic010G223300 Sobic001G382600 Sobic001G382600 Sobic002G008800--Sobic001G382600 Sobic004G177300 Sobic004G177300 Sobic002G008800--Sobic004G177300 Sobic004G275700 Sobic004G275700 Sobic002G008800--Sobic004G275700 Sobic002G008800--Sobic001G333100 Sobic002G008800--Sobic008G055900 Sobic003G379200 Sobic003G379200 Sobic008G083200--Sobic003G379200 Sobic009G044800 Sobic009G044800 Sobic008G083200--Sobic009G044800 Sobic008G083200--Sobic006G174850 Sobic006G261400 Sobic006G261400 Sobic008G083200--Sobic006G261400 Sobic003G428100 Sobic003G428100 Sobic008G083200--Sobic003G428100 Sobic006G127600 Sobic006G127600 Sobic008G083200--Sobic006G127600 Sobic008G083200--Sobic002G117400 Sobic006G118700 Sobic006G118700 Sobic008G083200--Sobic006G118700 Sobic008G083200--Sobic006G131000 Sobic001G124200 Sobic001G124200 Sobic010G020300--Sobic001G124200 Sobic010G205800 Sobic010G205800 Sobic010G020300--Sobic010G205800 Sobic004G065000 Sobic004G065000 Sobic010G020300--Sobic004G065000 Sobic001G390800 Sobic001G390800 Sobic010G020300--Sobic001G390800 Sobic003G352200 Sobic003G352200 Sobic010G020300--Sobic003G352200 Sobic010G020300--Sobic004G177300 Sobic010G020300--Sobic010G278200 Sobic001G227400 Sobic001G227400 Sobic010G020300--Sobic001G227400 Sobic001G121200 Sobic001G121200 Sobic010G020300--Sobic001G121200 Sobic001G031100 Sobic001G031100 Sobic009G192000--Sobic001G031100 Sobic009G192000--Sobic007G167900 Sobic009G192000--Sobic010G020400 Sobic003G349300 Sobic003G349300 Sobic009G192000--Sobic003G349300 Sobic009G192000--Sobic001G014800 Sobic009G192000--Sobic003G338500 Sobic009G192000--Sobic006G180000 Sobic010G205300 Sobic010G205300 Sobic009G192000--Sobic010G205300 Sobic003G374000 Sobic003G374000 Sobic009G192000--Sobic003G374000
Octagon: transcription factors


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