Gene annotation
Transcriptome id Sobic.010G220500.1
Synonym AAH, ATAAH, Sb10g026590
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
hydrolase, putative, expressed
UniProt C5Z7M6
Pfam PF07687 PF01546
Panther DB PTHR32494 PTHR32494:SF7
NCBI CDD -
KEGG Orthology K02083; allantoate deiminase
Gene Ontology GO:0016787; hydrolase activity GO:0008152metabolic process


Orthologs (automatic annotation)
TAIR AT4G20070 : allantoate amidohydrolase
RAP-DB (Rice) LOC_Os06g45480.1 : hydrolase, putative, expressed
MaizeGDB (Corn) Zm00025a051746
Brachypodium KQK17002
Barley HORVU7Hr1G108960.9 , HORVU7Hr1G108960.8 , HORVU7Hr1G108960.5 , HORVU7Hr1G108960.4 , HORVU7Hr1G108960.7 , HORVU7Hr1G108960.6 , HORVU7Hr1G108960.1 , HORVU7Hr1G108960.3 , HORVU7Hr1G108960.2 , HORVU7Hr1G108960.32 , HORVU7Hr1G108960.31 , HORVU7Hr1G108960.30 , HORVU7Hr1G108960.24 , HORVU7Hr1G108960.25 , HORVU7Hr1G108960.26 , HORVU7Hr1G108960.27 , HORVU7Hr1G108960.20 , HORVU7Hr1G108960.21 , HORVU7Hr1G108960.22 , HORVU7Hr1G108960.23 , HORVU7Hr1G108960.28 , HORVU7Hr1G108960.29 , HORVU7Hr1G108960.18 , HORVU7Hr1G108960.11 , HORVU7Hr1G108960.10 , HORVU7Hr1G108960.13 , HORVU7Hr1G108960.12 , HORVU7Hr1G108960.15 , HORVU7Hr1G108960.14 , HORVU7Hr1G108960.17 , HORVU7Hr1G108960.16
Wheat TraesCS7A02G481500 , TraesCS7B02G383900 , TraesCS7B02G383900 , TraesCS7D02G468600 , TraesCS7D02G468600 , TraesCS7D02G468600 , TraesCS7D02G468600 , TraesCS7B02G383900
Populus -


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cDNA sequences
Sobic.010G220500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G421900 SCARECROW, putative, expressed -
2 Sobic.003G040200 expressed protein -
3 Sobic.002G358400 eukaryotic peptide chain release factor subunit 1-1, putative, expressed K03265: ETF1, peptide chain release factor subunit 1
4 Sobic.010G029900 leucine carboxyl methyltransferase 1, putative, expressed K15451: PPM2, LCMT2, tRNA wybutosine-synthesizing protein 4
5 Sobic.009G108700 -(PubMedID : 26976818)@NADP-dependent malic enzyme(PubMedID : 27016024)@NADP-dependent malic enzyme, chloroplast precursor, putative, expressed K00029: E1.1.1.40, malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+)
6 Sobic.010G240900 Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed K09286: EREBP-like factor
7 Sobic.007G099200 expressed protein -
8 Sobic.001G031600 calmodulin binding protein, putative, expressed -
9 Sobic.003G316700 katanin p80 WD40 repeat-containing subunit B1 homolog 1, putative, expressed K18643: katanin p80 WD40 repeat-containing subunit B1
10 Sobic.003G365700 expressed protein -
11 Sobic.004G259000 fimbrin-like protein 2, putative, expressed -
12 Sobic.008G124900 heat shock protein DnaJ, putative, expressed -
13 Sobic.004G146800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@spotted leaf 11, putative, expressed -
14 Sobic.002G394400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
15 Sobic.002G381700 WD-40 repeat family protein, putative, expressed -
16 Sobic.003G252600 PAP/25A associated domain containing protein, putative, expressed K03514: PAPD5_7, non-canonical poly(A) RNA polymerase PAPD5/7
17 Sobic.005G100700 mRNA-capping enzyme, putative, expressed -
18 Sobic.010G089400 TLD family protein, putative, expressed -
19 Sobic.009G066900 DnaK family protein, putative, expressed K09489: heat shock 70kDa protein 4
20 Sobic.001G297500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@MYB family transcription factor, putative, expressed -


Gene co-expression network
sample Sobic010G220500 Sobic010G220500 Sobic001G421900 Sobic001G421900 Sobic010G220500--Sobic001G421900 Sobic003G040200 Sobic003G040200 Sobic010G220500--Sobic003G040200 Sobic002G358400 Sobic002G358400 Sobic010G220500--Sobic002G358400 Sobic010G029900 Sobic010G029900 Sobic010G220500--Sobic010G029900 Sobic009G108700 Sobic009G108700 Sobic010G220500--Sobic009G108700 Sobic010G240900 Sobic010G240900 Sobic010G220500--Sobic010G240900 Sobic007G099200 Sobic007G099200 Sobic010G220500--Sobic007G099200 Sobic001G031600 Sobic001G031600 Sobic010G220500--Sobic001G031600 Sobic003G316700 Sobic003G316700 Sobic010G220500--Sobic003G316700 Sobic004G146800 Sobic004G146800 Sobic001G421900--Sobic004G146800 Sobic001G297500 Sobic001G297500 Sobic001G421900--Sobic001G297500 Sobic001G522600 Sobic001G522600 Sobic001G421900--Sobic001G522600 Sobic001G010300 Sobic001G010300 Sobic001G421900--Sobic001G010300 Sobic002G126500 Sobic002G126500 Sobic001G421900--Sobic002G126500 Sobic010G249100 Sobic010G249100 Sobic001G421900--Sobic010G249100 Sobic001G472600 Sobic001G472600 Sobic001G421900--Sobic001G472600 Sobic002G215100 Sobic002G215100 Sobic001G421900--Sobic002G215100 Sobic004G040350 Sobic004G040350 Sobic001G421900--Sobic004G040350 Sobic006G019300 Sobic006G019300 Sobic003G040200--Sobic006G019300 Sobic007G223000 Sobic007G223000 Sobic003G040200--Sobic007G223000 Sobic010G132600 Sobic010G132600 Sobic003G040200--Sobic010G132600 Sobic004G243600 Sobic004G243600 Sobic003G040200--Sobic004G243600 Sobic006G269700 Sobic006G269700 Sobic003G040200--Sobic006G269700 Sobic003G040200--Sobic007G099200 Sobic003G040200--Sobic010G220500 Sobic007G217600 Sobic007G217600 Sobic003G040200--Sobic007G217600 Sobic008G054000 Sobic008G054000 Sobic003G040200--Sobic008G054000 Sobic002G047700 Sobic002G047700 Sobic002G358400--Sobic002G047700 Sobic001G031100 Sobic001G031100 Sobic002G358400--Sobic001G031100 Sobic009G192000 Sobic009G192000 Sobic002G358400--Sobic009G192000 Sobic001G019800 Sobic001G019800 Sobic002G358400--Sobic001G019800 Sobic003G373500 Sobic003G373500 Sobic002G358400--Sobic003G373500 Sobic003G264200 Sobic003G264200 Sobic002G358400--Sobic003G264200 Sobic001G406100 Sobic001G406100 Sobic002G358400--Sobic001G406100 Sobic003G354600 Sobic003G354600 Sobic002G358400--Sobic003G354600 Sobic004G070700 Sobic004G070700 Sobic002G358400--Sobic004G070700 Sobic003G121300 Sobic003G121300 Sobic010G029900--Sobic003G121300 Sobic007G191700 Sobic007G191700 Sobic010G029900--Sobic007G191700 Sobic010G237900 Sobic010G237900 Sobic010G029900--Sobic010G237900 Sobic007G041300 Sobic007G041300 Sobic010G029900--Sobic007G041300 Sobic010G095700 Sobic010G095700 Sobic010G029900--Sobic010G095700 Sobic005G015450 Sobic005G015450 Sobic010G029900--Sobic005G015450 Sobic006G121300 Sobic006G121300 Sobic010G029900--Sobic006G121300 Sobic007G075900 Sobic007G075900 Sobic010G029900--Sobic007G075900 Sobic007G102700 Sobic007G102700 Sobic010G029900--Sobic007G102700 Sobic009G066900 Sobic009G066900 Sobic009G108700--Sobic009G066900 Sobic001G154500 Sobic001G154500 Sobic009G108700--Sobic001G154500 Sobic004G226600 Sobic004G226600 Sobic009G108700--Sobic004G226600 Sobic003G033700 Sobic003G033700 Sobic009G108700--Sobic003G033700 Sobic002G306000 Sobic002G306000 Sobic009G108700--Sobic002G306000 Sobic002G257200 Sobic002G257200 Sobic009G108700--Sobic002G257200 Sobic001G333900 Sobic001G333900 Sobic009G108700--Sobic001G333900 Sobic002G110300 Sobic002G110300 Sobic009G108700--Sobic002G110300 Sobic001G425800 Sobic001G425800 Sobic009G108700--Sobic001G425800 Sobic007G207400 Sobic007G207400 Sobic010G240900--Sobic007G207400 Sobic004G041500 Sobic004G041500 Sobic010G240900--Sobic004G041500 Sobic004G117900 Sobic004G117900 Sobic010G240900--Sobic004G117900 Sobic010G240900--Sobic001G297500 Sobic003G341400 Sobic003G341400 Sobic010G240900--Sobic003G341400 Sobic001G046200 Sobic001G046200 Sobic010G240900--Sobic001G046200 Sobic003G131400 Sobic003G131400 Sobic010G240900--Sobic003G131400 Sobic001G492300 Sobic001G492300 Sobic010G240900--Sobic001G492300 Sobic009G205200 Sobic009G205200 Sobic010G240900--Sobic009G205200 Sobic003G119700 Sobic003G119700 Sobic007G099200--Sobic003G119700 Sobic001G310100 Sobic001G310100 Sobic007G099200--Sobic001G310100 Sobic007G099200--Sobic007G223000 Sobic007G099200--Sobic009G066900 Sobic010G014100 Sobic010G014100 Sobic007G099200--Sobic010G014100 Sobic008G124900 Sobic008G124900 Sobic007G099200--Sobic008G124900 Sobic001G059200 Sobic001G059200 Sobic007G099200--Sobic001G059200 Sobic003G150100 Sobic003G150100 Sobic007G099200--Sobic003G150100 Sobic007G099200--Sobic002G358400 Sobic001G105500 Sobic001G105500 Sobic001G031600--Sobic001G105500 Sobic002G413000 Sobic002G413000 Sobic001G031600--Sobic002G413000 Sobic006G209400 Sobic006G209400 Sobic001G031600--Sobic006G209400 Sobic009G193400 Sobic009G193400 Sobic001G031600--Sobic009G193400 Sobic003G002400 Sobic003G002400 Sobic001G031600--Sobic003G002400 Sobic003G309200 Sobic003G309200 Sobic001G031600--Sobic003G309200 Sobic007G019800 Sobic007G019800 Sobic001G031600--Sobic007G019800 Sobic004G031600 Sobic004G031600 Sobic001G031600--Sobic004G031600 Sobic001G541100 Sobic001G541100 Sobic001G031600--Sobic001G541100 Sobic001G386300 Sobic001G386300 Sobic003G316700--Sobic001G386300 Sobic003G316700--Sobic001G425800 Sobic003G316700--Sobic001G031100 Sobic003G316700--Sobic002G358400 Sobic001G332500 Sobic001G332500 Sobic003G316700--Sobic001G332500 Sobic003G316700--Sobic002G257200 Sobic003G316700--Sobic004G146800 Sobic004G203400 Sobic004G203400 Sobic003G316700--Sobic004G203400 Sobic009G200800 Sobic009G200800 Sobic003G316700--Sobic009G200800
Octagon: transcription factors


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