Gene annotation
Transcriptome id Sobic.003G365700.1
Synonym Sb03g040740
Functional annotation expressed protein
UniProt C5XQK6
Pfam -
Panther DB PTHR35469 PTHR35469:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G32680 : -
RAP-DB (Rice) LOC_Os02g44132.2 : expressed protein
MaizeGDB (Corn) Zm00025a039575
Brachypodium KQK10732
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.003G365700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G111800 mitochondrial import inner membrane translocase subunit Tim17, putative, expressed -
2 Sobic.007G056500 cullin, putative, expressed K03869: cullin 3
3 Sobic.001G287800 GTPase-activating protein, putative, expressed K12493: ADP-ribosylation factor GTPase-activating protein 2/3
4 Sobic.002G165800 - -
5 Sobic.003G121300 expressed protein K15170: mediator of RNA polymerase II transcription subunit 27
6 Sobic.001G042200 ATP/GTP/Ca++ binding protein, putative, expressed K07870: RHOT1, mitochondrial Rho GTPase 1
7 Sobic.004G192900 expressed protein -
8 Sobic.006G121300 SWIRM domain containing protein, expressed K11649: SWI/SNF related-matrix-associated actin-dependent regulator of chromatin subfamily C
9 Sobic.004G345400 WD domain, G-beta repeat domain containing protein, expressed K05757: actin related protein 2/3 complex, subunit 1A/1B
10 Sobic.001G095000 CorA-like magnesium transporter protein, putative, expressed K16075: MRS2, magnesium transporter
11 Sobic.003G051700 universal stress protein domain containing protein, putative, expressed -
12 Sobic.006G219000 OsFBW1 - F-box domain and WD40 repeat containing protein, expressed -
13 Sobic.003G202600 single myb histone, putative, expressed K09422: transcription factor MYB, plant
14 Sobic.004G041500 protein phosphatase 2C, putative, expressed K17506: PPM1L, protein phosphatase 1L
15 Sobic.002G267400 POLD4A - Putative DNA polymerase delta complex subunit, expressed K03505: DNA polymerase delta subunit 4
16 Sobic.003G302200 2-aminoethanethiol dioxygenase, putative, expressed K10712: cysteamine dioxygenase
17 Sobic.010G055800 CDK-activating kinase assembly factor MAT1 family protein, expressed K10842: CDK-activating kinase assembly factor MAT1
18 Sobic.006G225300 expressed protein -
19 Sobic.002G277300 zinc RING finger protein, putative, expressed K19045: E3 ubiquitin-protein ligase BIG BROTHER and related proteins
20 Sobic.006G258900 expressed protein -


Gene co-expression network
sample Sobic003G365700 Sobic003G365700 Sobic008G111800 Sobic008G111800 Sobic003G365700--Sobic008G111800 Sobic007G056500 Sobic007G056500 Sobic003G365700--Sobic007G056500 Sobic001G287800 Sobic001G287800 Sobic003G365700--Sobic001G287800 Sobic002G165800 Sobic002G165800 Sobic003G365700--Sobic002G165800 Sobic003G121300 Sobic003G121300 Sobic003G365700--Sobic003G121300 Sobic001G042200 Sobic001G042200 Sobic003G365700--Sobic001G042200 Sobic004G192900 Sobic004G192900 Sobic003G365700--Sobic004G192900 Sobic006G121300 Sobic006G121300 Sobic003G365700--Sobic006G121300 Sobic004G345400 Sobic004G345400 Sobic003G365700--Sobic004G345400 Sobic009G059400 Sobic009G059400 Sobic008G111800--Sobic009G059400 Sobic008G111800--Sobic003G365700 Sobic005G198200 Sobic005G198200 Sobic008G111800--Sobic005G198200 Sobic007G218600 Sobic007G218600 Sobic008G111800--Sobic007G218600 Sobic007G148400 Sobic007G148400 Sobic008G111800--Sobic007G148400 Sobic009G137900 Sobic009G137900 Sobic008G111800--Sobic009G137900 Sobic009G186700 Sobic009G186700 Sobic008G111800--Sobic009G186700 Sobic009G017200 Sobic009G017200 Sobic008G111800--Sobic009G017200 Sobic001G025700 Sobic001G025700 Sobic008G111800--Sobic001G025700 Sobic006G186400 Sobic006G186400 Sobic007G056500--Sobic006G186400 Sobic002G034600 Sobic002G034600 Sobic007G056500--Sobic002G034600 Sobic007G056500--Sobic001G042200 Sobic010G077500 Sobic010G077500 Sobic007G056500--Sobic010G077500 Sobic010G095700 Sobic010G095700 Sobic007G056500--Sobic010G095700 Sobic004G180900 Sobic004G180900 Sobic007G056500--Sobic004G180900 Sobic001G395100 Sobic001G395100 Sobic007G056500--Sobic001G395100 Sobic001G066300 Sobic001G066300 Sobic007G056500--Sobic001G066300 Sobic007G056500--Sobic006G121300 Sobic004G041500 Sobic004G041500 Sobic001G287800--Sobic004G041500 Sobic003G073000 Sobic003G073000 Sobic001G287800--Sobic003G073000 Sobic004G116600 Sobic004G116600 Sobic001G287800--Sobic004G116600 Sobic001G287800--Sobic006G186400 Sobic001G425000 Sobic001G425000 Sobic001G287800--Sobic001G425000 Sobic001G287800--Sobic007G056500 Sobic004G094300 Sobic004G094300 Sobic001G287800--Sobic004G094300 Sobic001G287800--Sobic004G180900 Sobic010G243400 Sobic010G243400 Sobic001G287800--Sobic010G243400 Sobic004G209700 Sobic004G209700 Sobic002G165800--Sobic004G209700 Sobic005G207500 Sobic005G207500 Sobic002G165800--Sobic005G207500 Sobic006G096900 Sobic006G096900 Sobic002G165800--Sobic006G096900 Sobic002G165800--Sobic010G077500 Sobic010G226000 Sobic010G226000 Sobic002G165800--Sobic010G226000 Sobic007G103600 Sobic007G103600 Sobic002G165800--Sobic007G103600 Sobic009G228000 Sobic009G228000 Sobic002G165800--Sobic009G228000 Sobic006G056700 Sobic006G056700 Sobic002G165800--Sobic006G056700 Sobic009G092400 Sobic009G092400 Sobic002G165800--Sobic009G092400 Sobic001G114500 Sobic001G114500 Sobic003G121300--Sobic001G114500 Sobic010G237900 Sobic010G237900 Sobic003G121300--Sobic010G237900 Sobic010G029900 Sobic010G029900 Sobic003G121300--Sobic010G029900 Sobic005G160400 Sobic005G160400 Sobic003G121300--Sobic005G160400 Sobic003G132000 Sobic003G132000 Sobic003G121300--Sobic003G132000 Sobic001G487100 Sobic001G487100 Sobic003G121300--Sobic001G487100 Sobic004G156800 Sobic004G156800 Sobic003G121300--Sobic004G156800 Sobic002G361400 Sobic002G361400 Sobic003G121300--Sobic002G361400 Sobic009G164000 Sobic009G164000 Sobic003G121300--Sobic009G164000 Sobic001G042200--Sobic010G077500 Sobic001G042200--Sobic004G345400 Sobic007G187600 Sobic007G187600 Sobic001G042200--Sobic007G187600 Sobic008G058800 Sobic008G058800 Sobic001G042200--Sobic008G058800 Sobic001G042200--Sobic007G056500 Sobic003G212900 Sobic003G212900 Sobic001G042200--Sobic003G212900 Sobic007G042900 Sobic007G042900 Sobic001G042200--Sobic007G042900 Sobic009G249700 Sobic009G249700 Sobic001G042200--Sobic009G249700 Sobic006G281700 Sobic006G281700 Sobic001G042200--Sobic006G281700 Sobic004G192900--Sobic003G132000 Sobic009G258400 Sobic009G258400 Sobic004G192900--Sobic009G258400 Sobic004G192900--Sobic001G114500 Sobic006G270600 Sobic006G270600 Sobic004G192900--Sobic006G270600 Sobic004G192900--Sobic003G121300 Sobic010G264000 Sobic010G264000 Sobic004G192900--Sobic010G264000 Sobic010G209000 Sobic010G209000 Sobic004G192900--Sobic010G209000 Sobic004G353000 Sobic004G353000 Sobic004G192900--Sobic004G353000 Sobic001G259000 Sobic001G259000 Sobic004G192900--Sobic001G259000 Sobic006G121300--Sobic001G395100 Sobic006G121300--Sobic002G034600 Sobic001G216100 Sobic001G216100 Sobic006G121300--Sobic001G216100 Sobic010G028300 Sobic010G028300 Sobic006G121300--Sobic010G028300 Sobic006G121300--Sobic007G056500 Sobic001G473600 Sobic001G473600 Sobic006G121300--Sobic001G473600 Sobic008G179700 Sobic008G179700 Sobic006G121300--Sobic008G179700 Sobic003G401100 Sobic003G401100 Sobic006G121300--Sobic003G401100 Sobic006G121300--Sobic005G160400 Sobic004G345400--Sobic001G042200 Sobic004G345400--Sobic010G077500 Sobic004G345400--Sobic009G249700 Sobic004G345400--Sobic007G042900 Sobic004G345400--Sobic004G180900 Sobic004G345400--Sobic006G186400 Sobic004G084500 Sobic004G084500 Sobic004G345400--Sobic004G084500 Sobic004G345400--Sobic007G056500 Sobic003G394200 Sobic003G394200 Sobic004G345400--Sobic003G394200
Octagon: transcription factors


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