Gene annotation
Transcriptome id Sobic.010G089400.2,Sobic.010G089400.1,Sobic.010G089400.3
Synonym Sb10g007750
Functional annotation TLD family protein, putative, expressed
UniProt A0A194YI26 , A0A194YJ41 , A0A1W0VS14
Pfam PF07534
Panther DB PTHR23354 PTHR23354:SF76
NCBI CDD KOG2372; Oxidation resistance protein
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G39870 : TLD-domain containing nucleolar protein
RAP-DB (Rice) LOC_Os06g11790.2,LOC_Os06g11790.1 : TLD family protein, putative, expressed
MaizeGDB (Corn) Zm00025a049500
Brachypodium KQK18919 , KQK18921 , PNT69607 , PNT69608 , KQK18923 , KQK18922 , KQK18920 , KQK01844
Barley HORVU7Hr1G037070.7 , HORVU7Hr1G037070.18 , HORVU7Hr1G037070.10 , HORVU7Hr1G037070.11 , HORVU7Hr1G037070.13 , HORVU7Hr1G037070.16 , HORVU7Hr1G037070.17 , HORVU7Hr1G037070.8 , HORVU7Hr1G037070.9 , HORVU6Hr1G074360.19 , HORVU7Hr1G037070.2 , HORVU6Hr1G074360.15 , HORVU7Hr1G037070.1 , HORVU7Hr1G037070.6 , HORVU6Hr1G074360.11 , HORVU6Hr1G074360.12 , HORVU6Hr1G074360.13 , HORVU6Hr1G074360.20 , HORVU7Hr1G037070.3 , HORVU6Hr1G074360.6 , HORVU6Hr1G074360.7 , HORVU6Hr1G074360.4 , HORVU6Hr1G074360.17 , HORVU6Hr1G074360.2 , HORVU6Hr1G074360.3 , HORVU6Hr1G074360.1 , HORVU6Hr1G074360.10 , HORVU6Hr1G074360.8 , HORVU6Hr1G074360.9 , HORVU7Hr1G037070.4 , HORVU7Hr1G037070.5
Wheat TraesCS7A02G180000 , TraesCS7A02G180000 , TraesCS7A02G180000 , TraesCS7D02G181500 , TraesCS7D02G181500 , TraesCS6D02G280100 , TraesCS6B02G329900 , TraesCS6B02G329900 , TraesCS7B02G085200 , TraesCS7B02G085200
Populus -


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cDNA sequences
Sobic.010G089400


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G100700 mRNA-capping enzyme, putative, expressed -
2 Sobic.010G021500 WD domain, G-beta repeat domain containing protein, expressed -
3 Sobic.006G096900 expressed protein -
4 Sobic.002G211800 AT-rich interaction region, putative, expressed -
5 Sobic.010G086600 cyclin-T1-4, putative, expressed K15188: cyclin T
6 Sobic.010G226000 expressed protein -
7 Sobic.003G362600 AT hook motif family protein, expressed K15200: general transcription factor 3C polypeptide 2
8 Sobic.004G311400 PHD-finger domain containing protein, putative, expressed -
9 Sobic.007G159900 ubiquitin carboxyl-terminal hydrolase family protein, expressed K11855: ubiquitin carboxyl-terminal hydrolase 36/42
10 Sobic.010G167900 expressed protein K14376: poly(A) polymerase
11 Sobic.002G193300 jmjC domain containing protein, expressed K15601: [histone H3]-dimethyl-L-lysine9 demethylase
12 Sobic.005G207500 AAA-type ATPase family protein, putative, expressed -
13 Sobic.006G056700 tRNA nucleotidyltransferase/polyA polymerase family protein, putative, expressed -
14 Sobic.004G088200 transcription factor S-II, central domain containing protein, expressed -
15 Sobic.003G217900 GDSL-like lipase/acylhydrolase, putative, expressed -
16 Sobic.002G165800 - -
17 Sobic.003G093800 - K03254: translation initiation factor 3 subunit A
18 Sobic.003G214600 transcriptional corepressor LEUNIG, putative, expressed -
19 Sobic.008G001200 RNA recognition motif containing protein, putative, expressed -
20 Sobic.004G023000 SAC9, putative, expressed -


Gene co-expression network
sample Sobic010G089400 Sobic010G089400 Sobic005G100700 Sobic005G100700 Sobic010G089400--Sobic005G100700 Sobic010G021500 Sobic010G021500 Sobic010G089400--Sobic010G021500 Sobic006G096900 Sobic006G096900 Sobic010G089400--Sobic006G096900 Sobic002G211800 Sobic002G211800 Sobic010G089400--Sobic002G211800 Sobic010G086600 Sobic010G086600 Sobic010G089400--Sobic010G086600 Sobic010G226000 Sobic010G226000 Sobic010G089400--Sobic010G226000 Sobic003G362600 Sobic003G362600 Sobic010G089400--Sobic003G362600 Sobic004G311400 Sobic004G311400 Sobic010G089400--Sobic004G311400 Sobic007G159900 Sobic007G159900 Sobic010G089400--Sobic007G159900 Sobic003G360400 Sobic003G360400 Sobic005G100700--Sobic003G360400 Sobic002G344000 Sobic002G344000 Sobic005G100700--Sobic002G344000 Sobic005G100700--Sobic007G159900 Sobic003G389200 Sobic003G389200 Sobic005G100700--Sobic003G389200 Sobic008G113100 Sobic008G113100 Sobic005G100700--Sobic008G113100 Sobic007G146100 Sobic007G146100 Sobic005G100700--Sobic007G146100 Sobic005G100700--Sobic006G096900 Sobic001G456300 Sobic001G456300 Sobic005G100700--Sobic001G456300 Sobic010G112100 Sobic010G112100 Sobic005G100700--Sobic010G112100 Sobic003G398700 Sobic003G398700 Sobic010G021500--Sobic003G398700 Sobic010G167900 Sobic010G167900 Sobic010G021500--Sobic010G167900 Sobic010G021500--Sobic008G113100 Sobic010G021500--Sobic006G096900 Sobic001G456900 Sobic001G456900 Sobic010G021500--Sobic001G456900 Sobic010G149200 Sobic010G149200 Sobic010G021500--Sobic010G149200 Sobic005G027400 Sobic005G027400 Sobic010G021500--Sobic005G027400 Sobic010G021500--Sobic005G100700 Sobic003G221900 Sobic003G221900 Sobic010G021500--Sobic003G221900 Sobic008G063300 Sobic008G063300 Sobic006G096900--Sobic008G063300 Sobic009G177500 Sobic009G177500 Sobic006G096900--Sobic009G177500 Sobic006G252900 Sobic006G252900 Sobic006G096900--Sobic006G252900 Sobic006G096900--Sobic003G360400 Sobic003G095900 Sobic003G095900 Sobic006G096900--Sobic003G095900 Sobic006G056700 Sobic006G056700 Sobic006G096900--Sobic006G056700 Sobic001G433800 Sobic001G433800 Sobic006G096900--Sobic001G433800 Sobic001G384300 Sobic001G384300 Sobic006G096900--Sobic001G384300 Sobic009G044800 Sobic009G044800 Sobic006G096900--Sobic009G044800 Sobic009G165700 Sobic009G165700 Sobic002G211800--Sobic009G165700 Sobic007G031900 Sobic007G031900 Sobic002G211800--Sobic007G031900 Sobic002G211800--Sobic002G344000 Sobic003G166750 Sobic003G166750 Sobic002G211800--Sobic003G166750 Sobic004G023000 Sobic004G023000 Sobic002G211800--Sobic004G023000 Sobic009G132700 Sobic009G132700 Sobic002G211800--Sobic009G132700 Sobic003G170900 Sobic003G170900 Sobic002G211800--Sobic003G170900 Sobic002G294800 Sobic002G294800 Sobic002G211800--Sobic002G294800 Sobic002G211800--Sobic003G362600 Sobic007G042900 Sobic007G042900 Sobic010G086600--Sobic007G042900 Sobic002G193300 Sobic002G193300 Sobic010G086600--Sobic002G193300 Sobic001G542450 Sobic001G542450 Sobic010G086600--Sobic001G542450 Sobic008G002300 Sobic008G002300 Sobic010G086600--Sobic008G002300 Sobic002G292900 Sobic002G292900 Sobic010G086600--Sobic002G292900 Sobic010G086600--Sobic010G089400 Sobic002G371300 Sobic002G371300 Sobic010G086600--Sobic002G371300 Sobic006G088200 Sobic006G088200 Sobic010G086600--Sobic006G088200 Sobic007G180600 Sobic007G180600 Sobic010G086600--Sobic007G180600 Sobic001G451400 Sobic001G451400 Sobic010G226000--Sobic001G451400 Sobic009G256400 Sobic009G256400 Sobic010G226000--Sobic009G256400 Sobic004G209700 Sobic004G209700 Sobic010G226000--Sobic004G209700 Sobic010G226000--Sobic009G165700 Sobic010G226000--Sobic003G166750 Sobic001G441400 Sobic001G441400 Sobic010G226000--Sobic001G441400 Sobic001G457800 Sobic001G457800 Sobic010G226000--Sobic001G457800 Sobic001G111850 Sobic001G111850 Sobic010G226000--Sobic001G111850 Sobic003G444800 Sobic003G444800 Sobic010G226000--Sobic003G444800 Sobic003G362600--Sobic009G165700 Sobic001G251200 Sobic001G251200 Sobic003G362600--Sobic001G251200 Sobic003G362600--Sobic003G166750 Sobic003G362600--Sobic002G211800 Sobic008G087866 Sobic008G087866 Sobic003G362600--Sobic008G087866 Sobic003G362600--Sobic004G023000 Sobic003G093800 Sobic003G093800 Sobic003G362600--Sobic003G093800 Sobic004G091100 Sobic004G091100 Sobic003G362600--Sobic004G091100 Sobic003G362600--Sobic001G441400 Sobic002G029100 Sobic002G029100 Sobic004G311400--Sobic002G029100 Sobic008G096000 Sobic008G096000 Sobic004G311400--Sobic008G096000 Sobic003G038100 Sobic003G038100 Sobic004G311400--Sobic003G038100 Sobic005G200800 Sobic005G200800 Sobic004G311400--Sobic005G200800 Sobic005G207500 Sobic005G207500 Sobic004G311400--Sobic005G207500 Sobic002G153700 Sobic002G153700 Sobic004G311400--Sobic002G153700 Sobic002G245000 Sobic002G245000 Sobic004G311400--Sobic002G245000 Sobic003G214600 Sobic003G214600 Sobic004G311400--Sobic003G214600 Sobic004G311400--Sobic010G089400 Sobic007G159900--Sobic003G360400 Sobic004G158400 Sobic004G158400 Sobic007G159900--Sobic004G158400 Sobic002G366400 Sobic002G366400 Sobic007G159900--Sobic002G366400 Sobic007G159900--Sobic010G112100 Sobic007G183900 Sobic007G183900 Sobic007G159900--Sobic007G183900 Sobic005G064000 Sobic005G064000 Sobic007G159900--Sobic005G064000 Sobic007G159900--Sobic005G100700 Sobic003G188400 Sobic003G188400 Sobic007G159900--Sobic003G188400 Sobic007G159900--Sobic008G113100
Octagon: transcription factors


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