Gene annotation
Transcriptome id Sobic.001G297500.1
Synonym Sb01g029020
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
MYB family transcription factor, putative, expressed
UniProt C5WSC0
Pfam PF00249
Panther DB PTHR24078 PTHR24078:SF195
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G47390 : myb-like transcription factor family protein
RAP-DB (Rice) LOC_Os10g41200.1 : MYB family transcription factor, putative, expressed
MaizeGDB (Corn) Zm00025a003307 , Zm00025a051961
Brachypodium KQJ97807
Barley HORVU1Hr1G056020.2 , HORVU1Hr1G056020.1
Wheat TraesCS1A02G219400 , TraesCS1D02G221000 , TraesCS1B02G232800
Populus -


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cDNA sequences
Sobic.001G297500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G117900 expressed protein -
2 Sobic.001G126100 OsFBO16 - F-box and other domain containing protein, expressed -
3 Sobic.010G240900 Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed K09286: EREBP-like factor
4 Sobic.007G207400 Ser/Thr protein phosphatase family protein, putative, expressed K04460: serine/threonine-protein phosphatase 5
5 Sobic.006G048600 - -
6 Sobic.010G004300 myb-like DNA-binding domain containing protein, expressed -
7 Sobic.003G313300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@plus-3 domain containing protein, expressed -
8 Sobic.001G067200 expressed protein -
9 Sobic.008G188900 homeobox domain containing protein, expressed -
10 Sobic.004G164400 expressed protein -
11 Sobic.003G345400 NLI interacting factor-like phosphatase, putative, expressed K15731: carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase
12 Sobic.002G104100 FYVE zinc finger domain containing protein, expressed -
13 Sobic.006G209400 protein phosphatase 2C, putative, expressed K17506: PPM1L, protein phosphatase 1L
14 Sobic.001G212300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@myosin-2 heavy chain, non muscle, putative, expressed -
15 Sobic.003G191700 ELF3 protein, putative, expressed K12125: protein EARLY FLOWERING 3
16 Sobic.001G421900 SCARECROW, putative, expressed -
17 Sobic.002G006600 -(PubMedID : 26976818)@aminotransferase, classes I and II, domain containing protein, expressed K14272: glutamate--glyoxylate aminotransferase
18 Sobic.006G105400 expressed protein -
19 Sobic.001G333200 RING zinc finger protein-like, putative, expressed -
20 Sobic.002G262600 protein kinase, putative, expressed K13436: pto-interacting protein 1


Gene co-expression network
sample Sobic001G297500 Sobic001G297500 Sobic004G117900 Sobic004G117900 Sobic001G297500--Sobic004G117900 Sobic001G126100 Sobic001G126100 Sobic001G297500--Sobic001G126100 Sobic010G240900 Sobic010G240900 Sobic001G297500--Sobic010G240900 Sobic007G207400 Sobic007G207400 Sobic001G297500--Sobic007G207400 Sobic006G048600 Sobic006G048600 Sobic001G297500--Sobic006G048600 Sobic010G004300 Sobic010G004300 Sobic001G297500--Sobic010G004300 Sobic003G313300 Sobic003G313300 Sobic001G297500--Sobic003G313300 Sobic001G067200 Sobic001G067200 Sobic001G297500--Sobic001G067200 Sobic008G188900 Sobic008G188900 Sobic001G297500--Sobic008G188900 Sobic003G248200 Sobic003G248200 Sobic004G117900--Sobic003G248200 Sobic002G350300 Sobic002G350300 Sobic004G117900--Sobic002G350300 Sobic003G131400 Sobic003G131400 Sobic004G117900--Sobic003G131400 Sobic007G019800 Sobic007G019800 Sobic004G117900--Sobic007G019800 Sobic002G262600 Sobic002G262600 Sobic004G117900--Sobic002G262600 Sobic001G512700 Sobic001G512700 Sobic004G117900--Sobic001G512700 Sobic002G297200 Sobic002G297200 Sobic004G117900--Sobic002G297200 Sobic004G117900--Sobic010G240900 Sobic010G223700 Sobic010G223700 Sobic004G117900--Sobic010G223700 Sobic010G149200 Sobic010G149200 Sobic001G126100--Sobic010G149200 Sobic004G164400 Sobic004G164400 Sobic001G126100--Sobic004G164400 Sobic003G221900 Sobic003G221900 Sobic001G126100--Sobic003G221900 Sobic002G104100 Sobic002G104100 Sobic001G126100--Sobic002G104100 Sobic001G169900 Sobic001G169900 Sobic001G126100--Sobic001G169900 Sobic001G126100--Sobic001G297500 Sobic010G243900 Sobic010G243900 Sobic001G126100--Sobic010G243900 Sobic004G042200 Sobic004G042200 Sobic001G126100--Sobic004G042200 Sobic006G105400 Sobic006G105400 Sobic001G126100--Sobic006G105400 Sobic010G240900--Sobic007G207400 Sobic004G041500 Sobic004G041500 Sobic010G240900--Sobic004G041500 Sobic010G240900--Sobic004G117900 Sobic010G240900--Sobic001G297500 Sobic003G341400 Sobic003G341400 Sobic010G240900--Sobic003G341400 Sobic001G046200 Sobic001G046200 Sobic010G240900--Sobic001G046200 Sobic010G240900--Sobic003G131400 Sobic001G492300 Sobic001G492300 Sobic010G240900--Sobic001G492300 Sobic009G205200 Sobic009G205200 Sobic010G240900--Sobic009G205200 Sobic007G207400--Sobic010G240900 Sobic004G094300 Sobic004G094300 Sobic007G207400--Sobic004G094300 Sobic007G207400--Sobic002G350300 Sobic007G207400--Sobic002G262600 Sobic007G207400--Sobic001G297500 Sobic007G207400--Sobic004G117900 Sobic007G207400--Sobic009G205200 Sobic004G066200 Sobic004G066200 Sobic007G207400--Sobic004G066200 Sobic007G207400--Sobic003G248200 Sobic004G007100 Sobic004G007100 Sobic006G048600--Sobic004G007100 Sobic006G048500 Sobic006G048500 Sobic006G048600--Sobic006G048500 Sobic001G318432 Sobic001G318432 Sobic006G048600--Sobic001G318432 Sobic006G048600--Sobic006G105400 Sobic004G341900 Sobic004G341900 Sobic006G048600--Sobic004G341900 Sobic001G205200 Sobic001G205200 Sobic006G048600--Sobic001G205200 Sobic005G144400 Sobic005G144400 Sobic006G048600--Sobic005G144400 Sobic003G148000 Sobic003G148000 Sobic006G048600--Sobic003G148000 Sobic001G214300 Sobic001G214300 Sobic006G048600--Sobic001G214300 Sobic009G238000 Sobic009G238000 Sobic010G004300--Sobic009G238000 Sobic010G004300--Sobic003G313300 Sobic010G004300--Sobic001G214300 Sobic010G004300--Sobic006G048600 Sobic002G121600 Sobic002G121600 Sobic010G004300--Sobic002G121600 Sobic003G406300 Sobic003G406300 Sobic010G004300--Sobic003G406300 Sobic010G004300--Sobic001G297500 Sobic003G191700 Sobic003G191700 Sobic010G004300--Sobic003G191700 Sobic010G004300--Sobic004G341900 Sobic003G017100 Sobic003G017100 Sobic003G313300--Sobic003G017100 Sobic003G313300--Sobic003G191700 Sobic010G176200 Sobic010G176200 Sobic003G313300--Sobic010G176200 Sobic007G047400 Sobic007G047400 Sobic003G313300--Sobic007G047400 Sobic004G028500 Sobic004G028500 Sobic003G313300--Sobic004G028500 Sobic001G017300 Sobic001G017300 Sobic003G313300--Sobic001G017300 Sobic001G468700 Sobic001G468700 Sobic003G313300--Sobic001G468700 Sobic010G002700 Sobic010G002700 Sobic003G313300--Sobic010G002700 Sobic005G206300 Sobic005G206300 Sobic003G313300--Sobic005G206300 Sobic001G427300 Sobic001G427300 Sobic001G067200--Sobic001G427300 Sobic001G067200--Sobic001G297500 Sobic001G067200--Sobic010G223700 Sobic003G220200 Sobic003G220200 Sobic001G067200--Sobic003G220200 Sobic010G255700 Sobic010G255700 Sobic001G067200--Sobic010G255700 Sobic001G067200--Sobic004G164400 Sobic001G486300 Sobic001G486300 Sobic001G067200--Sobic001G486300 Sobic007G145200 Sobic007G145200 Sobic001G067200--Sobic007G145200 Sobic001G067200--Sobic006G105400 Sobic010G013800 Sobic010G013800 Sobic008G188900--Sobic010G013800 Sobic008G188900--Sobic004G341900 Sobic003G029700 Sobic003G029700 Sobic008G188900--Sobic003G029700 Sobic008G188900--Sobic001G214300 Sobic008G188900--Sobic005G144400 Sobic008G188900--Sobic006G048600 Sobic008G188900--Sobic006G048500 Sobic008G188900--Sobic004G007100 Sobic010G097600 Sobic010G097600 Sobic008G188900--Sobic010G097600
Octagon: transcription factors


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