Gene annotation
Transcriptome id Sobic.010G004300.1
Synonym Sb10g000590
Functional annotation myb-like DNA-binding domain containing protein, expressed
UniProt C5Z255
Pfam PF00249
Panther DB PTHR12802 PTHR12802:SF57
NCBI CDD KOG0724; Zuotin and related molecular chaperones (DnaJ superfamily), contains DNA-binding domains
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G52660 : Homeodomain-like superfamily protein
RAP-DB (Rice) LOC_Os06g01670.1 : myb-like DNA-binding domain containing protein, expressed
MaizeGDB (Corn) Zm00025a050309 , Zm00025a041950 , Zm00025a032319
Brachypodium KQK00786 , KQK00783 , KQK00780 , KQK00781 , KQK00785 , KQK17070 , KQK17071 , PNT75422 , KQK00779 , KQK00784 , KQK00782
Barley HORVU7Hr1G107550.11 , HORVU7Hr1G107550.10 , HORVU7Hr1G107550.13 , HORVU7Hr1G107550.12 , HORVU7Hr1G001830.7 , HORVU7Hr1G001830.6 , HORVU7Hr1G001830.5 , HORVU7Hr1G001830.4 , HORVU7Hr1G001830.3 , HORVU7Hr1G001830.2 , HORVU7Hr1G001830.8 , HORVU7Hr1G107550.5 , HORVU7Hr1G107550.4 , HORVU7Hr1G107550.7 , HORVU7Hr1G107550.6 , HORVU7Hr1G107550.3 , HORVU7Hr1G107550.2 , HORVU7Hr1G107550.9 , HORVU7Hr1G107550.8 , HORVU0Hr1G031850.5 , HORVU0Hr1G031850.4 , HORVU0Hr1G031850.1 , HORVU0Hr1G031850.3 , HORVU0Hr1G031850.2 , HORVU6Hr1G066000.1 , HORVU6Hr1G066000.2 , HORVU6Hr1G066000.3 , HORVU6Hr1G066000.4 , HORVU6Hr1G066000.5 , HORVU7Hr1G001830.12 , HORVU7Hr1G001830.11 , HORVU7Hr1G001830.10
Wheat TraesCS6D02G239800 , TraesCS6A02G258600 , TraesCS6A02G258600 , TraesCS6A02G258600 , TraesCS6A02G258600 , TraesCS6A02G258600 , TraesCS6A02G258600 , TraesCS7B02G372500 , TraesCS6D02G239800 , TraesCS6D02G239800 , TraesCS6D02G239800 , TraesCS6B02G266800 , TraesCS6B02G266800 , TraesCS6B02G266800 , TraesCS6B02G266800 , TraesCS6B02G266800 , TraesCS7A02G017600
Populus -


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cDNA sequences
Sobic.010G004300


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G238000 suppressor of phythchrome A, putative, expressed K16240: protein suppressor of PHYA-105 1
2 Sobic.003G313300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@plus-3 domain containing protein, expressed -
3 Sobic.001G214300 expressed protein -
4 Sobic.006G048600 - -
5 Sobic.002G121600 myb-like DNA-binding domain containing protein, expressed -
6 Sobic.003G406300 - -
7 Sobic.001G297500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@MYB family transcription factor, putative, expressed -
8 Sobic.003G191700 ELF3 protein, putative, expressed K12125: protein EARLY FLOWERING 3
9 Sobic.004G341900 lecithine cholesterol acyltransferase, putative, expressed -
10 Sobic.006G105400 expressed protein -
11 Sobic.003G148000 zinc finger, C3HC4 type domain containing protein, expressed K10666: E3 ubiquitin-protein ligase RNF5
12 Sobic.008G151100 protein kinase domain containing protein, expressed -
13 Sobic.009G026500 ATSIZ1/SIZ1, putative, expressed -
14 Sobic.004G117900 expressed protein -
15 Sobic.007G158300 phosphoglycerate mutase, putative, expressed K15634: 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase
16 Sobic.007G047400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@-(PubMedID : 21930910)@-(PubMedID : 24884377)@MYB family transcription factor, putative, expressed K12133: MYB-related transcription factor LHY
17 Sobic.003G248200 NLI interacting factor-like phosphatase, putative, expressed -
18 Sobic.003G332800 GTPase-activating protein, putative, expressed -
19 Sobic.005G144400 - -
20 Sobic.003G229300 NLI interacting factor-like phosphatase, putative, expressed K17616: CTD small phosphatase-like protein 2


Gene co-expression network
sample Sobic010G004300 Sobic010G004300 Sobic009G238000 Sobic009G238000 Sobic010G004300--Sobic009G238000 Sobic003G313300 Sobic003G313300 Sobic010G004300--Sobic003G313300 Sobic001G214300 Sobic001G214300 Sobic010G004300--Sobic001G214300 Sobic006G048600 Sobic006G048600 Sobic010G004300--Sobic006G048600 Sobic002G121600 Sobic002G121600 Sobic010G004300--Sobic002G121600 Sobic003G406300 Sobic003G406300 Sobic010G004300--Sobic003G406300 Sobic001G297500 Sobic001G297500 Sobic010G004300--Sobic001G297500 Sobic003G191700 Sobic003G191700 Sobic010G004300--Sobic003G191700 Sobic004G341900 Sobic004G341900 Sobic010G004300--Sobic004G341900 Sobic009G238000--Sobic010G004300 Sobic009G026500 Sobic009G026500 Sobic009G238000--Sobic009G026500 Sobic001G534700 Sobic001G534700 Sobic009G238000--Sobic001G534700 Sobic009G238000--Sobic003G191700 Sobic005G100700 Sobic005G100700 Sobic009G238000--Sobic005G100700 Sobic008G151100 Sobic008G151100 Sobic009G238000--Sobic008G151100 Sobic001G365900 Sobic001G365900 Sobic009G238000--Sobic001G365900 Sobic001G290100 Sobic001G290100 Sobic009G238000--Sobic001G290100 Sobic002G008900 Sobic002G008900 Sobic009G238000--Sobic002G008900 Sobic003G017100 Sobic003G017100 Sobic003G313300--Sobic003G017100 Sobic003G313300--Sobic003G191700 Sobic010G176200 Sobic010G176200 Sobic003G313300--Sobic010G176200 Sobic007G047400 Sobic007G047400 Sobic003G313300--Sobic007G047400 Sobic004G028500 Sobic004G028500 Sobic003G313300--Sobic004G028500 Sobic001G017300 Sobic001G017300 Sobic003G313300--Sobic001G017300 Sobic001G468700 Sobic001G468700 Sobic003G313300--Sobic001G468700 Sobic010G002700 Sobic010G002700 Sobic003G313300--Sobic010G002700 Sobic005G206300 Sobic005G206300 Sobic003G313300--Sobic005G206300 Sobic001G214300--Sobic004G341900 Sobic003G148000 Sobic003G148000 Sobic001G214300--Sobic003G148000 Sobic002G006900 Sobic002G006900 Sobic001G214300--Sobic002G006900 Sobic005G144400 Sobic005G144400 Sobic001G214300--Sobic005G144400 Sobic003G176500 Sobic003G176500 Sobic001G214300--Sobic003G176500 Sobic003G029700 Sobic003G029700 Sobic001G214300--Sobic003G029700 Sobic002G243900 Sobic002G243900 Sobic001G214300--Sobic002G243900 Sobic006G048500 Sobic006G048500 Sobic001G214300--Sobic006G048500 Sobic007G096600 Sobic007G096600 Sobic001G214300--Sobic007G096600 Sobic004G007100 Sobic004G007100 Sobic006G048600--Sobic004G007100 Sobic006G048600--Sobic006G048500 Sobic001G318432 Sobic001G318432 Sobic006G048600--Sobic001G318432 Sobic006G105400 Sobic006G105400 Sobic006G048600--Sobic006G105400 Sobic006G048600--Sobic004G341900 Sobic001G205200 Sobic001G205200 Sobic006G048600--Sobic001G205200 Sobic006G048600--Sobic005G144400 Sobic006G048600--Sobic003G148000 Sobic006G048600--Sobic001G214300 Sobic001G356500 Sobic001G356500 Sobic002G121600--Sobic001G356500 Sobic009G191100 Sobic009G191100 Sobic002G121600--Sobic009G191100 Sobic002G133400 Sobic002G133400 Sobic002G121600--Sobic002G133400 Sobic002G121600--Sobic003G148000 Sobic002G343901 Sobic002G343901 Sobic002G121600--Sobic002G343901 Sobic001G456900 Sobic001G456900 Sobic002G121600--Sobic001G456900 Sobic003G332800 Sobic003G332800 Sobic002G121600--Sobic003G332800 Sobic007G065400 Sobic007G065400 Sobic002G121600--Sobic007G065400 Sobic008G113100 Sobic008G113100 Sobic002G121600--Sobic008G113100 Sobic003G406300--Sobic003G176500 Sobic002G145101 Sobic002G145101 Sobic003G406300--Sobic002G145101 Sobic003G406300--Sobic007G096600 Sobic003G170100 Sobic003G170100 Sobic003G406300--Sobic003G170100 Sobic005G110472 Sobic005G110472 Sobic003G406300--Sobic005G110472 Sobic003G406300--Sobic004G007100 Sobic003G200200 Sobic003G200200 Sobic003G406300--Sobic003G200200 Sobic003G406300--Sobic001G205200 Sobic003G406300--Sobic005G144400 Sobic004G117900 Sobic004G117900 Sobic001G297500--Sobic004G117900 Sobic001G126100 Sobic001G126100 Sobic001G297500--Sobic001G126100 Sobic010G240900 Sobic010G240900 Sobic001G297500--Sobic010G240900 Sobic007G207400 Sobic007G207400 Sobic001G297500--Sobic007G207400 Sobic001G297500--Sobic006G048600 Sobic001G297500--Sobic010G004300 Sobic001G297500--Sobic003G313300 Sobic001G067200 Sobic001G067200 Sobic001G297500--Sobic001G067200 Sobic008G188900 Sobic008G188900 Sobic001G297500--Sobic008G188900 Sobic004G042200 Sobic004G042200 Sobic003G191700--Sobic004G042200 Sobic003G191700--Sobic003G313300 Sobic006G133900 Sobic006G133900 Sobic003G191700--Sobic006G133900 Sobic003G229300 Sobic003G229300 Sobic003G191700--Sobic003G229300 Sobic003G191700--Sobic003G017100 Sobic009G038900 Sobic009G038900 Sobic003G191700--Sobic009G038900 Sobic007G198300 Sobic007G198300 Sobic003G191700--Sobic007G198300 Sobic003G155100 Sobic003G155100 Sobic003G191700--Sobic003G155100 Sobic003G191700--Sobic010G002700 Sobic004G341900--Sobic001G214300 Sobic004G341900--Sobic003G029700 Sobic004G341900--Sobic002G006900 Sobic010G013800 Sobic010G013800 Sobic004G341900--Sobic010G013800 Sobic004G341900--Sobic003G176500 Sobic009G191000 Sobic009G191000 Sobic004G341900--Sobic009G191000 Sobic004G341900--Sobic009G026500 Sobic004G341900--Sobic008G188900 Sobic004G341900--Sobic006G048600
Octagon: transcription factors


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