Gene annotation
Transcriptome id Sobic.004G259000.1
Synonym FIM2, Sb04g029730
Functional annotation fimbrin-like protein 2, putative, expressed
UniProt C5XZU7
Pfam PF00307
Panther DB PTHR19961 PTHR19961:SF25
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT5G35700 : fimbrin-like protein 2
RAP-DB (Rice) LOC_Os02g48740.1 : fimbrin-like protein 2, putative, expressed
MaizeGDB (Corn) Zm00025a021830 , Zm00025a022463 , Zm00025a032587
Brachypodium KQK01051 , PNT75997 , KQK18479
Barley HORVU6Hr1G070810.8 , HORVU6Hr1G070810.9 , HORVU6Hr1G070810.1 , HORVU6Hr1G070810.2 , HORVU6Hr1G070810.3 , HORVU6Hr1G070810.4 , HORVU6Hr1G070810.5 , HORVU6Hr1G070810.6 , HORVU6Hr1G070810.7 , HORVU7Hr1G045950.12 , HORVU7Hr1G045950.10 , HORVU7Hr1G045950.2 , HORVU7Hr1G045950.3 , HORVU7Hr1G045950.4 , HORVU7Hr1G045950.5 , HORVU7Hr1G045950.6 , HORVU7Hr1G045950.7 , HORVU7Hr1G045950.8 , HORVU7Hr1G045950.9 , HORVU6Hr1G070810.12 , HORVU6Hr1G070810.13 , HORVU6Hr1G070810.10 , HORVU6Hr1G070810.11 , HORVU6Hr1G070810.14 , HORVU6Hr1G070810.15
Wheat TraesCS7D02G226100 , TraesCS7B02G191200 , TraesCS6D02G263000 , TraesCS6A02G282500 , TraesCS6A02G282500 , TraesCS7A02G224600 , TraesCS7A02G224600 , TraesCS7A02G224600 , TraesCS6B02G310900
Populus -


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cDNA sequences
Sobic.004G259000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G099200 VHS and GAT domain containing protein, expressed -
2 Sobic.002G193300 jmjC domain containing protein, expressed K15601: [histone H3]-dimethyl-L-lysine9 demethylase
3 Sobic.003G284700 trehalose synthase, putative, expressed K16055: trehalose 6-phosphate synthase/phosphatase
4 Sobic.003G318700 diacylglycerol kinase, putative, expressed K00901: dgkA, diacylglycerol kinase (ATP)
5 Sobic.006G210700 potassium transporter, putative, expressed -
6 Sobic.010G086600 cyclin-T1-4, putative, expressed K15188: cyclin T
7 Sobic.004G160700 TUDOR protein with multiple SNc domains, putative, expressed K15979: staphylococcal nuclease domain-containing protein 1
8 Sobic.009G208100 CAMK_KIN1/SNF1/Nim1_like_AMPKh.3 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K07198: PRKAA, 5'-AMP-activated protein kinase, catalytic alpha subunit
9 Sobic.002G292900 protein binding protein, putative, expressed -
10 Sobic.007G180600 UBX domain-containing protein, putative, expressed -
11 Sobic.003G302200 2-aminoethanethiol dioxygenase, putative, expressed K10712: cysteamine dioxygenase
12 Sobic.010G220500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@hydrolase, putative, expressed K02083: allantoate deiminase
13 Sobic.002G419000 AGC_AGC_other_RS6K_like.2 - ACG kinases include homologs to PKA, PKG and PKC, expressed K04688: ribosomal protein S6 kinase beta
14 Sobic.003G247200 pterin-4-alpha-carbinolamine dehydratase, putative, expressed -
15 Sobic.002G290100 expressed protein K08739: DNA mismatch repair protein MLH3
16 Sobic.007G032000 tryptophan synthase beta chain 1, putative, expressed K01696: tryptophan synthase beta chain
17 Sobic.003G266900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@DNA binding protein, putative, expressed -
18 Sobic.010G089400 TLD family protein, putative, expressed -
19 Sobic.010G182700 ras-related protein, putative, expressed K07936: GTP-binding nuclear protein Ran
20 Sobic.003G284000 CAMK_KIN1/SNF1/Nim1_like_AMPKh.3 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K07198: PRKAA, 5'-AMP-activated protein kinase, catalytic alpha subunit


Gene co-expression network
sample Sobic004G259000 Sobic004G259000 Sobic009G099200 Sobic009G099200 Sobic004G259000--Sobic009G099200 Sobic002G193300 Sobic002G193300 Sobic004G259000--Sobic002G193300 Sobic003G284700 Sobic003G284700 Sobic004G259000--Sobic003G284700 Sobic003G318700 Sobic003G318700 Sobic004G259000--Sobic003G318700 Sobic006G210700 Sobic006G210700 Sobic004G259000--Sobic006G210700 Sobic010G086600 Sobic010G086600 Sobic004G259000--Sobic010G086600 Sobic004G160700 Sobic004G160700 Sobic004G259000--Sobic004G160700 Sobic009G208100 Sobic009G208100 Sobic004G259000--Sobic009G208100 Sobic002G292900 Sobic002G292900 Sobic004G259000--Sobic002G292900 Sobic007G180600 Sobic007G180600 Sobic009G099200--Sobic007G180600 Sobic010G169900 Sobic010G169900 Sobic009G099200--Sobic010G169900 Sobic004G124500 Sobic004G124500 Sobic009G099200--Sobic004G124500 Sobic006G101800 Sobic006G101800 Sobic009G099200--Sobic006G101800 Sobic003G302200 Sobic003G302200 Sobic009G099200--Sobic003G302200 Sobic009G099200--Sobic006G210700 Sobic002G313900 Sobic002G313900 Sobic009G099200--Sobic002G313900 Sobic001G251200 Sobic001G251200 Sobic009G099200--Sobic001G251200 Sobic009G249700 Sobic009G249700 Sobic009G099200--Sobic009G249700 Sobic002G193300--Sobic009G249700 Sobic002G193300--Sobic010G086600 Sobic009G119000 Sobic009G119000 Sobic002G193300--Sobic009G119000 Sobic003G093800 Sobic003G093800 Sobic002G193300--Sobic003G093800 Sobic004G353000 Sobic004G353000 Sobic002G193300--Sobic004G353000 Sobic007G042900 Sobic007G042900 Sobic002G193300--Sobic007G042900 Sobic003G212900 Sobic003G212900 Sobic002G193300--Sobic003G212900 Sobic010G089400 Sobic010G089400 Sobic002G193300--Sobic010G089400 Sobic003G362600 Sobic003G362600 Sobic002G193300--Sobic003G362600 Sobic001G278700 Sobic001G278700 Sobic003G284700--Sobic001G278700 Sobic003G055200 Sobic003G055200 Sobic003G284700--Sobic003G055200 Sobic003G284700--Sobic006G210700 Sobic010G273800 Sobic010G273800 Sobic003G284700--Sobic010G273800 Sobic006G257600 Sobic006G257600 Sobic003G284700--Sobic006G257600 Sobic003G284700--Sobic004G160700 Sobic002G354800 Sobic002G354800 Sobic003G284700--Sobic002G354800 Sobic002G104300 Sobic002G104300 Sobic003G284700--Sobic002G104300 Sobic004G340566 Sobic004G340566 Sobic003G284700--Sobic004G340566 Sobic003G318800 Sobic003G318800 Sobic003G318700--Sobic003G318800 Sobic003G318700--Sobic004G259000 Sobic008G116600 Sobic008G116600 Sobic003G318700--Sobic008G116600 Sobic003G346500 Sobic003G346500 Sobic003G318700--Sobic003G346500 Sobic010G182700 Sobic010G182700 Sobic003G318700--Sobic010G182700 Sobic002G419000 Sobic002G419000 Sobic003G318700--Sobic002G419000 Sobic004G155400 Sobic004G155400 Sobic003G318700--Sobic004G155400 Sobic006G277100 Sobic006G277100 Sobic003G318700--Sobic006G277100 Sobic001G286000 Sobic001G286000 Sobic003G318700--Sobic001G286000 Sobic001G114200 Sobic001G114200 Sobic006G210700--Sobic001G114200 Sobic009G166600 Sobic009G166600 Sobic006G210700--Sobic009G166600 Sobic006G128100 Sobic006G128100 Sobic006G210700--Sobic006G128100 Sobic009G186700 Sobic009G186700 Sobic006G210700--Sobic009G186700 Sobic006G210700--Sobic010G169900 Sobic006G210700--Sobic002G313900 Sobic007G148400 Sobic007G148400 Sobic006G210700--Sobic007G148400 Sobic002G076500 Sobic002G076500 Sobic006G210700--Sobic002G076500 Sobic001G490900 Sobic001G490900 Sobic006G210700--Sobic001G490900 Sobic010G086600--Sobic007G042900 Sobic010G086600--Sobic002G193300 Sobic001G542450 Sobic001G542450 Sobic010G086600--Sobic001G542450 Sobic008G002300 Sobic008G002300 Sobic010G086600--Sobic008G002300 Sobic010G086600--Sobic002G292900 Sobic010G086600--Sobic010G089400 Sobic002G371300 Sobic002G371300 Sobic010G086600--Sobic002G371300 Sobic006G088200 Sobic006G088200 Sobic010G086600--Sobic006G088200 Sobic010G086600--Sobic007G180600 Sobic005G197100 Sobic005G197100 Sobic004G160700--Sobic005G197100 Sobic003G004500 Sobic003G004500 Sobic004G160700--Sobic003G004500 Sobic007G018200 Sobic007G018200 Sobic004G160700--Sobic007G018200 Sobic004G160700--Sobic009G166600 Sobic005G114800 Sobic005G114800 Sobic004G160700--Sobic005G114800 Sobic001G524000 Sobic001G524000 Sobic004G160700--Sobic001G524000 Sobic008G160500 Sobic008G160500 Sobic004G160700--Sobic008G160500 Sobic002G322400 Sobic002G322400 Sobic004G160700--Sobic002G322400 Sobic004G160700--Sobic006G257600 Sobic009G208100--Sobic002G313900 Sobic003G284000 Sobic003G284000 Sobic009G208100--Sobic003G284000 Sobic003G084000 Sobic003G084000 Sobic009G208100--Sobic003G084000 Sobic001G478800 Sobic001G478800 Sobic009G208100--Sobic001G478800 Sobic001G477700 Sobic001G477700 Sobic009G208100--Sobic001G477700 Sobic006G139100 Sobic006G139100 Sobic009G208100--Sobic006G139100 Sobic010G072800 Sobic010G072800 Sobic009G208100--Sobic010G072800 Sobic001G375600 Sobic001G375600 Sobic009G208100--Sobic001G375600 Sobic004G228800 Sobic004G228800 Sobic009G208100--Sobic004G228800 Sobic004G320700 Sobic004G320700 Sobic002G292900--Sobic004G320700 Sobic010G244900 Sobic010G244900 Sobic002G292900--Sobic010G244900 Sobic002G292900--Sobic009G166600 Sobic002G292900--Sobic002G313900 Sobic006G032300 Sobic006G032300 Sobic002G292900--Sobic006G032300 Sobic002G292900--Sobic010G086600 Sobic005G034700 Sobic005G034700 Sobic002G292900--Sobic005G034700 Sobic001G237600 Sobic001G237600 Sobic002G292900--Sobic001G237600 Sobic001G340300 Sobic001G340300 Sobic002G292900--Sobic001G340300
Octagon: transcription factors


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