Gene annotation
Transcriptome id Sobic.003G266900.1
Synonym Sb03g031970
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence (PubMedID : 27586543)
DNA binding protein, putative, expressed
UniProt A0A1B6Q5I5
Pfam PF02485
Panther DB PTHR31042 PTHR31042:SF2
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016020; membrane GO:0008375acetylglucosaminyltransferase activity


Orthologs (automatic annotation)
TAIR AT1G62305 : Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein
RAP-DB (Rice) LOC_Os01g50040.1 : DNA binding protein, putative, expressed
MaizeGDB (Corn) Zm00025a027915
Brachypodium KQK09316 , KQK09315
Barley HORVU3Hr1G065000.4 , HORVU3Hr1G065000.5 , HORVU3Hr1G065000.6 , HORVU3Hr1G065000.1 , HORVU3Hr1G065000.2 , HORVU3Hr1G065000.3
Wheat TraesCS3D02G258800 , TraesCS3B02G291600 , TraesCS3A02G258700
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G153000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@actin, putative, expressed K10355: actin, other eukaryote
2 Sobic.009G208100 CAMK_KIN1/SNF1/Nim1_like_AMPKh.3 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K07198: PRKAA, 5'-AMP-activated protein kinase, catalytic alpha subunit
3 Sobic.004G004200 expressed protein -
4 Sobic.006G126500 OsFBX146 - F-box domain containing protein, expressed -
5 Sobic.001G251200 phospholipid-transporting ATPase, putative, expressed K14802: DRS2, phospholipid-transporting ATPase
6 Sobic.001G095500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@transcription factor(PubMedID : 30367619)@WRKY121, expressed -
7 Sobic.003G269800 phosphatidylinositol transfer, putative, expressed -
8 Sobic.007G180600 UBX domain-containing protein, putative, expressed -
9 Sobic.003G005600 ubiquitin conjugating enzyme protein, putative, expressed K10581: ubiquitin-conjugating enzyme E2 O
10 Sobic.006G125400 steroid nuclear receptor, ligand-binding, putative, expressed -
11 Sobic.002G346400 transmembrane protein 49, putative, expressed -
12 Sobic.005G059600 WD domain, G-beta repeat domain containing protein, expressed -
13 Sobic.004G261600 expressed protein -
14 Sobic.004G228800 LMBR1 integral membrane protein, putative, expressed -
15 Sobic.003G084000 transporter family protein, putative, expressed -
16 Sobic.006G271200 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@cysteine protease ATG4, putative, expressed K08342: cysteine protease ATG4
17 Sobic.010G072800 exportin-7-A, putative, expressed K18460: XPO7, exportin-7
18 Sobic.004G124200 3-hydroxyacyl-CoA dehydrogenase, putative, expressed K10527: enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase
19 Sobic.003G036800 WD domain, G-beta repeat domain containing protein, expressed K10260: FBXW7, F-box and WD-40 domain protein 7
20 Sobic.003G089000 ubiquitin conjugating enzyme protein, putative, expressed K10581: ubiquitin-conjugating enzyme E2 O


Gene co-expression network
sample Sobic003G266900 Sobic003G266900 Sobic009G153000 Sobic009G153000 Sobic003G266900--Sobic009G153000 Sobic009G208100 Sobic009G208100 Sobic003G266900--Sobic009G208100 Sobic004G004200 Sobic004G004200 Sobic003G266900--Sobic004G004200 Sobic006G126500 Sobic006G126500 Sobic003G266900--Sobic006G126500 Sobic001G251200 Sobic001G251200 Sobic003G266900--Sobic001G251200 Sobic001G095500 Sobic001G095500 Sobic003G266900--Sobic001G095500 Sobic003G269800 Sobic003G269800 Sobic003G266900--Sobic003G269800 Sobic007G180600 Sobic007G180600 Sobic003G266900--Sobic007G180600 Sobic003G005600 Sobic003G005600 Sobic003G266900--Sobic003G005600 Sobic005G231900 Sobic005G231900 Sobic009G153000--Sobic005G231900 Sobic006G271200 Sobic006G271200 Sobic009G153000--Sobic006G271200 Sobic009G153000--Sobic003G266900 Sobic009G153000--Sobic009G208100 Sobic003G289900 Sobic003G289900 Sobic009G153000--Sobic003G289900 Sobic009G153000--Sobic003G269800 Sobic004G162400 Sobic004G162400 Sobic009G153000--Sobic004G162400 Sobic001G395700 Sobic001G395700 Sobic009G153000--Sobic001G395700 Sobic002G346400 Sobic002G346400 Sobic009G153000--Sobic002G346400 Sobic002G313900 Sobic002G313900 Sobic009G208100--Sobic002G313900 Sobic003G284000 Sobic003G284000 Sobic009G208100--Sobic003G284000 Sobic003G084000 Sobic003G084000 Sobic009G208100--Sobic003G084000 Sobic001G478800 Sobic001G478800 Sobic009G208100--Sobic001G478800 Sobic001G477700 Sobic001G477700 Sobic009G208100--Sobic001G477700 Sobic006G139100 Sobic006G139100 Sobic009G208100--Sobic006G139100 Sobic010G072800 Sobic010G072800 Sobic009G208100--Sobic010G072800 Sobic001G375600 Sobic001G375600 Sobic009G208100--Sobic001G375600 Sobic004G228800 Sobic004G228800 Sobic009G208100--Sobic004G228800 Sobic004G004300 Sobic004G004300 Sobic004G004200--Sobic004G004300 Sobic001G281100 Sobic001G281100 Sobic004G004200--Sobic001G281100 Sobic002G430000 Sobic002G430000 Sobic004G004200--Sobic002G430000 Sobic004G269200 Sobic004G269200 Sobic004G004200--Sobic004G269200 Sobic001G101100 Sobic001G101100 Sobic004G004200--Sobic001G101100 Sobic004G004200--Sobic001G251200 Sobic004G261600 Sobic004G261600 Sobic004G004200--Sobic004G261600 Sobic002G270500 Sobic002G270500 Sobic004G004200--Sobic002G270500 Sobic003G126300 Sobic003G126300 Sobic004G004200--Sobic003G126300 Sobic007G172200 Sobic007G172200 Sobic006G126500--Sobic007G172200 Sobic006G204900 Sobic006G204900 Sobic006G126500--Sobic006G204900 Sobic007G075400 Sobic007G075400 Sobic006G126500--Sobic007G075400 Sobic010G072400 Sobic010G072400 Sobic006G126500--Sobic010G072400 Sobic001G370900 Sobic001G370900 Sobic006G126500--Sobic001G370900 Sobic004G331100 Sobic004G331100 Sobic006G126500--Sobic004G331100 Sobic007G088100 Sobic007G088100 Sobic006G126500--Sobic007G088100 Sobic006G126500--Sobic004G269200 Sobic006G126500--Sobic001G375600 Sobic003G362600 Sobic003G362600 Sobic001G251200--Sobic003G362600 Sobic001G128300 Sobic001G128300 Sobic001G251200--Sobic001G128300 Sobic009G165700 Sobic009G165700 Sobic001G251200--Sobic009G165700 Sobic001G251200--Sobic004G004300 Sobic001G251200--Sobic004G261600 Sobic001G451400 Sobic001G451400 Sobic001G251200--Sobic001G451400 Sobic001G043100 Sobic001G043100 Sobic001G251200--Sobic001G043100 Sobic006G131000 Sobic006G131000 Sobic001G251200--Sobic006G131000 Sobic001G251200--Sobic001G281100 Sobic002G110300 Sobic002G110300 Sobic001G095500--Sobic002G110300 Sobic001G095500--Sobic001G251200 Sobic007G196900 Sobic007G196900 Sobic001G095500--Sobic007G196900 Sobic001G538700 Sobic001G538700 Sobic001G095500--Sobic001G538700 Sobic009G183000 Sobic009G183000 Sobic001G095500--Sobic009G183000 Sobic007G047700 Sobic007G047700 Sobic001G095500--Sobic007G047700 Sobic001G037150 Sobic001G037150 Sobic001G095500--Sobic001G037150 Sobic006G251000 Sobic006G251000 Sobic001G095500--Sobic006G251000 Sobic001G521500 Sobic001G521500 Sobic001G095500--Sobic001G521500 Sobic009G118600 Sobic009G118600 Sobic003G269800--Sobic009G118600 Sobic001G217400 Sobic001G217400 Sobic003G269800--Sobic001G217400 Sobic004G124500 Sobic004G124500 Sobic003G269800--Sobic004G124500 Sobic001G409300 Sobic001G409300 Sobic003G269800--Sobic001G409300 Sobic007G056600 Sobic007G056600 Sobic003G269800--Sobic007G056600 Sobic003G269800--Sobic003G126300 Sobic001G399800 Sobic001G399800 Sobic003G269800--Sobic001G399800 Sobic004G211900 Sobic004G211900 Sobic003G269800--Sobic004G211900 Sobic003G281900 Sobic003G281900 Sobic003G269800--Sobic003G281900 Sobic007G180600--Sobic001G251200 Sobic007G180600--Sobic004G228800 Sobic007G180600--Sobic006G131000 Sobic008G185500 Sobic008G185500 Sobic007G180600--Sobic008G185500 Sobic007G180600--Sobic001G477700 Sobic001G522100 Sobic001G522100 Sobic007G180600--Sobic001G522100 Sobic007G180600--Sobic004G261600 Sobic007G042900 Sobic007G042900 Sobic007G180600--Sobic007G042900 Sobic004G257200 Sobic004G257200 Sobic007G180600--Sobic004G257200 Sobic009G126900 Sobic009G126900 Sobic003G005600--Sobic009G126900 Sobic002G304000 Sobic002G304000 Sobic003G005600--Sobic002G304000 Sobic001G003000 Sobic001G003000 Sobic003G005600--Sobic001G003000 Sobic003G329400 Sobic003G329400 Sobic003G005600--Sobic003G329400 Sobic003G005600--Sobic006G271200 Sobic004G101900 Sobic004G101900 Sobic003G005600--Sobic004G101900 Sobic008G062200 Sobic008G062200 Sobic003G005600--Sobic008G062200 Sobic010G043400 Sobic010G043400 Sobic003G005600--Sobic010G043400 Sobic010G064700 Sobic010G064700 Sobic003G005600--Sobic010G064700
Octagon: transcription factors


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