Gene annotation
Transcriptome id Sobic.009G208100.1
Synonym KIN10, Sb09g026450, AKIN10, SNRK1.1
Functional annotation CAMK_KIN1/SNF1/Nim1_like_AMPKh.3 - CAMK includes calcium/calmodulin depedent protein kinases, expressed
UniProt C5Z1H4
Pfam PF14531 PF02149
Panther DB PTHR24343 PTHR24343:SF183
NCBI CDD KOG0583; Serine/threonine protein kinase
KEGG Orthology K07198; PRKAA, 5'-AMP-activated protein kinase, catalytic alpha subunit
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G01090 : SNF1 kinase homolog 10
RAP-DB (Rice) LOC_Os05g45420.3 : CAMK_KIN1/SNF1/Nim1_like_AMPKh.3 - CAMK includes calcium/calmodulin depedent protein kinases, expressed
MaizeGDB (Corn) Zm00025a013241 , Zm00025a038010 , Zm00025a044262 , Zm00025a044264
Brachypodium KQK09576 , KQK09577 , KQK09575 , PNT70843 , PNT70842
Barley HORVU1Hr1G081310.1 , HORVU1Hr1G081310.2 , HORVU1Hr1G081310.3 , HORVU1Hr1G081310.4 , HORVU3Hr1G069190.6 , HORVU3Hr1G069190.4 , HORVU3Hr1G069190.5 , HORVU3Hr1G069190.2 , HORVU3Hr1G069190.3 , HORVU3Hr1G069190.1 , HORVU4Hr1G056610.4 , HORVU4Hr1G056610.5 , HORVU4Hr1G056610.6 , HORVU4Hr1G056610.7 , HORVU4Hr1G056610.1 , HORVU4Hr1G056610.2 , HORVU4Hr1G056610.3
Wheat TraesCS1B02G364800 , TraesCS3D02G282800 , TraesCS3D02G282800 , TraesCS1D02G353300 , TraesCS3A02G282800 , TraesCS3A02G282800 , TraesCS1A02G350500 , TraesCS3B02G316500 , TraesCS3B02G316500
Populus -


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cDNA sequences
Sobic.009G208100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G313900 potassium transporter, putative, expressed -
2 Sobic.003G284000 CAMK_KIN1/SNF1/Nim1_like_AMPKh.3 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K07198: PRKAA, 5'-AMP-activated protein kinase, catalytic alpha subunit
3 Sobic.003G084000 transporter family protein, putative, expressed -
4 Sobic.001G478800 expressed protein -
5 Sobic.001G477700 WD domain, G-beta repeat domain containing protein, expressed K11807: WDTC1, WD and tetratricopeptide repeats protein 1
6 Sobic.006G139100 polyadenylate-binding protein, putative, expressed K13126: polyadenylate-binding protein
7 Sobic.010G072800 exportin-7-A, putative, expressed K18460: XPO7, exportin-7
8 Sobic.001G375600 transmembrane protein, putative, expressed -
9 Sobic.004G228800 LMBR1 integral membrane protein, putative, expressed -
10 Sobic.009G166600 nucleoside-triphosphatase, putative, expressed -
11 Sobic.007G180600 UBX domain-containing protein, putative, expressed -
12 Sobic.002G245000 HECT-domain domain containing protein, expressed K10591: NEDD4, E3 ubiquitin-protein ligase NEDD4
13 Sobic.009G153000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@actin, putative, expressed K10355: actin, other eukaryote
14 Sobic.001G034500 SEC14 cytosolic factor family protein, putative, expressed -
15 Sobic.007G000200 expressed protein -
16 Sobic.009G020500 expressed protein -
17 Sobic.002G193300 jmjC domain containing protein, expressed K15601: [histone H3]-dimethyl-L-lysine9 demethylase
18 Sobic.004G257200 phosphatidylinositol transfer, putative, expressed -
19 Sobic.005G046250 - -
20 Sobic.003G266900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@DNA binding protein, putative, expressed -


Gene co-expression network
sample Sobic009G208100 Sobic009G208100 Sobic002G313900 Sobic002G313900 Sobic009G208100--Sobic002G313900 Sobic003G284000 Sobic003G284000 Sobic009G208100--Sobic003G284000 Sobic003G084000 Sobic003G084000 Sobic009G208100--Sobic003G084000 Sobic001G478800 Sobic001G478800 Sobic009G208100--Sobic001G478800 Sobic001G477700 Sobic001G477700 Sobic009G208100--Sobic001G477700 Sobic006G139100 Sobic006G139100 Sobic009G208100--Sobic006G139100 Sobic010G072800 Sobic010G072800 Sobic009G208100--Sobic010G072800 Sobic001G375600 Sobic001G375600 Sobic009G208100--Sobic001G375600 Sobic004G228800 Sobic004G228800 Sobic009G208100--Sobic004G228800 Sobic009G166600 Sobic009G166600 Sobic002G313900--Sobic009G166600 Sobic002G313900--Sobic009G208100 Sobic002G313900--Sobic006G139100 Sobic002G292900 Sobic002G292900 Sobic002G313900--Sobic002G292900 Sobic006G210700 Sobic006G210700 Sobic002G313900--Sobic006G210700 Sobic008G021000 Sobic008G021000 Sobic002G313900--Sobic008G021000 Sobic009G249700 Sobic009G249700 Sobic002G313900--Sobic009G249700 Sobic002G313900--Sobic001G478800 Sobic003G212900 Sobic003G212900 Sobic002G313900--Sobic003G212900 Sobic003G050900 Sobic003G050900 Sobic003G284000--Sobic003G050900 Sobic003G284000--Sobic009G208100 Sobic007G042900 Sobic007G042900 Sobic003G284000--Sobic007G042900 Sobic001G034500 Sobic001G034500 Sobic003G284000--Sobic001G034500 Sobic009G077600 Sobic009G077600 Sobic003G284000--Sobic009G077600 Sobic003G209200 Sobic003G209200 Sobic003G284000--Sobic003G209200 Sobic009G003700 Sobic009G003700 Sobic003G284000--Sobic009G003700 Sobic006G174850 Sobic006G174850 Sobic003G284000--Sobic006G174850 Sobic004G147500 Sobic004G147500 Sobic003G284000--Sobic004G147500 Sobic009G212600 Sobic009G212600 Sobic003G084000--Sobic009G212600 Sobic003G084000--Sobic009G208100 Sobic004G032800 Sobic004G032800 Sobic003G084000--Sobic004G032800 Sobic003G084000--Sobic002G313900 Sobic003G338300 Sobic003G338300 Sobic003G084000--Sobic003G338300 Sobic005G197100 Sobic005G197100 Sobic003G084000--Sobic005G197100 Sobic005G079900 Sobic005G079900 Sobic003G084000--Sobic005G079900 Sobic003G304200 Sobic003G304200 Sobic003G084000--Sobic003G304200 Sobic003G084000--Sobic009G166600 Sobic001G478800--Sobic002G313900 Sobic003G227100 Sobic003G227100 Sobic001G478800--Sobic003G227100 Sobic004G236200 Sobic004G236200 Sobic001G478800--Sobic004G236200 Sobic006G203300 Sobic006G203300 Sobic001G478800--Sobic006G203300 Sobic004G323700 Sobic004G323700 Sobic001G478800--Sobic004G323700 Sobic004G257200 Sobic004G257200 Sobic001G478800--Sobic004G257200 Sobic002G114900 Sobic002G114900 Sobic001G478800--Sobic002G114900 Sobic001G478800--Sobic009G208100 Sobic001G478800--Sobic006G139100 Sobic006G131000 Sobic006G131000 Sobic001G477700--Sobic006G131000 Sobic001G096000 Sobic001G096000 Sobic001G477700--Sobic001G096000 Sobic001G477700--Sobic007G042900 Sobic001G477700--Sobic001G034500 Sobic007G196900 Sobic007G196900 Sobic001G477700--Sobic007G196900 Sobic007G180600 Sobic007G180600 Sobic001G477700--Sobic007G180600 Sobic001G413800 Sobic001G413800 Sobic001G477700--Sobic001G413800 Sobic001G477700--Sobic003G284000 Sobic010G204400 Sobic010G204400 Sobic001G477700--Sobic010G204400 Sobic004G145000 Sobic004G145000 Sobic006G139100--Sobic004G145000 Sobic006G139100--Sobic002G313900 Sobic006G139100--Sobic007G042900 Sobic003G150900 Sobic003G150900 Sobic006G139100--Sobic003G150900 Sobic006G139100--Sobic003G227100 Sobic001G005600 Sobic001G005600 Sobic006G139100--Sobic001G005600 Sobic006G139100--Sobic003G050900 Sobic002G150700 Sobic002G150700 Sobic006G139100--Sobic002G150700 Sobic003G046300 Sobic003G046300 Sobic006G139100--Sobic003G046300 Sobic010G072800--Sobic001G375600 Sobic006G271200 Sobic006G271200 Sobic010G072800--Sobic006G271200 Sobic002G430000 Sobic002G430000 Sobic010G072800--Sobic002G430000 Sobic001G207400 Sobic001G207400 Sobic010G072800--Sobic001G207400 Sobic004G209800 Sobic004G209800 Sobic010G072800--Sobic004G209800 Sobic003G089000 Sobic003G089000 Sobic010G072800--Sobic003G089000 Sobic007G060201 Sobic007G060201 Sobic010G072800--Sobic007G060201 Sobic006G204900 Sobic006G204900 Sobic010G072800--Sobic006G204900 Sobic004G269200 Sobic004G269200 Sobic010G072800--Sobic004G269200 Sobic001G007100 Sobic001G007100 Sobic001G375600--Sobic001G007100 Sobic001G375600--Sobic010G072800 Sobic009G165400 Sobic009G165400 Sobic001G375600--Sobic009G165400 Sobic001G273700 Sobic001G273700 Sobic001G375600--Sobic001G273700 Sobic007G088100 Sobic007G088100 Sobic001G375600--Sobic007G088100 Sobic001G375600--Sobic003G089000 Sobic001G375600--Sobic004G269200 Sobic003G259100 Sobic003G259100 Sobic001G375600--Sobic003G259100 Sobic001G375600--Sobic006G204900 Sobic004G261600 Sobic004G261600 Sobic004G228800--Sobic004G261600 Sobic010G261600 Sobic010G261600 Sobic004G228800--Sobic010G261600 Sobic004G228800--Sobic004G323700 Sobic010G278200 Sobic010G278200 Sobic004G228800--Sobic010G278200 Sobic004G228800--Sobic004G236200 Sobic004G228800--Sobic006G131000 Sobic005G177700 Sobic005G177700 Sobic004G228800--Sobic005G177700 Sobic007G056600 Sobic007G056600 Sobic004G228800--Sobic007G056600 Sobic003G126300 Sobic003G126300 Sobic004G228800--Sobic003G126300
Octagon: transcription factors


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