Gene annotation
Transcriptome id Sobic.009G020500.1
Synonym Sb09g001810
Functional annotation expressed protein
UniProt C5YYY8
Pfam PF09743
Panther DB PTHR31057 PTHR31057:SF0
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G46220 : -
RAP-DB (Rice) LOC_Os05g02650.1 : expressed protein
MaizeGDB (Corn) Zm00025a040820
Brachypodium KQK07769 , KQJ91114
Barley HORVU1Hr1G007580.9 , HORVU1Hr1G007580.8 , HORVU1Hr1G007580.3 , HORVU1Hr1G007580.2 , HORVU1Hr1G007580.1 , HORVU1Hr1G007580.7 , HORVU1Hr1G007580.6 , HORVU1Hr1G007580.5 , HORVU1Hr1G007580.4 , HORVU1Hr1G007600.12 , HORVU1Hr1G007600.13 , HORVU1Hr1G007580.10 , HORVU1Hr1G007600.14 , HORVU1Hr1G007600.1 , HORVU1Hr1G007600.2 , HORVU1Hr1G007600.3 , HORVU1Hr1G007600.4
Wheat TraesCS1A02G046500 , TraesCS1A02G046500 , TraesCS1D02G047400 , TraesCS1D02G047400 , TraesCS1B02G060000 , TraesCS1B02G060000 , TraesCS1D02G047600
Populus -


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cDNA sequences
Sobic.009G020500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G224800 expressed protein -
2 Sobic.009G119000 tetratricopeptide repeat containing protein, putative, expressed K09527: DnaJ homolog subfamily C member 7
3 Sobic.002G245000 HECT-domain domain containing protein, expressed K10591: NEDD4, E3 ubiquitin-protein ligase NEDD4
4 Sobic.009G255600 cleavage and polyadenylation specificity factor, putative, expressed K10610: DNA damage-binding protein 1
5 Sobic.003G062300 NF-X1-type zinc finger protein, putative, expressed K15683: NFXL1, NF-X1-type zinc finger protein NFXL1
6 Sobic.009G126300 RING E3 ligase protein, putative, expressed K16279: E3 ubiquitin-protein ligase KEG
7 Sobic.002G422100 EMB1011, putative, expressed K14317: NUP214, nuclear pore complex protein Nup214
8 Sobic.003G212900 zinc ion binding protein, putative, expressed -
9 Sobic.002G344600 expressed protein -
10 Sobic.004G088501 - K17302: COPB2, coatomer subunit beta'
11 Sobic.001G137000 aberrant pollen transmission 1, putative, expressed -
12 Sobic.007G168300 UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY, putative, expressed -
13 Sobic.005G200800 homeobox domain containing protein, expressed -
14 Sobic.001G135500 HECT-domain domain containing protein, expressed K10588: ubiquitin-protein ligase E3 B
15 Sobic.010G001100 chromo domain containing protein, expressed -
16 Sobic.003G093800 - K03254: translation initiation factor 3 subunit A
17 Sobic.004G178300 splicing factor U2AF, putative, expressed -
18 Sobic.010G130100 BAH domain containing protein, expressed -
19 Sobic.006G240100 BRCA1-associated protein, putative, expressed K10632: BRCA1-associated protein
20 Sobic.004G048800 - K12599: SKI2, antiviral helicase SKI2


Gene co-expression network
sample Sobic009G020500 Sobic009G020500 Sobic006G224800 Sobic006G224800 Sobic009G020500--Sobic006G224800 Sobic009G119000 Sobic009G119000 Sobic009G020500--Sobic009G119000 Sobic002G245000 Sobic002G245000 Sobic009G020500--Sobic002G245000 Sobic009G255600 Sobic009G255600 Sobic009G020500--Sobic009G255600 Sobic003G062300 Sobic003G062300 Sobic009G020500--Sobic003G062300 Sobic009G126300 Sobic009G126300 Sobic009G020500--Sobic009G126300 Sobic002G422100 Sobic002G422100 Sobic009G020500--Sobic002G422100 Sobic003G212900 Sobic003G212900 Sobic009G020500--Sobic003G212900 Sobic002G344600 Sobic002G344600 Sobic009G020500--Sobic002G344600 Sobic006G224800--Sobic003G062300 Sobic003G416700 Sobic003G416700 Sobic006G224800--Sobic003G416700 Sobic006G166200 Sobic006G166200 Sobic006G224800--Sobic006G166200 Sobic003G189600 Sobic003G189600 Sobic006G224800--Sobic003G189600 Sobic004G053500 Sobic004G053500 Sobic006G224800--Sobic004G053500 Sobic009G249700 Sobic009G249700 Sobic006G224800--Sobic009G249700 Sobic004G051200 Sobic004G051200 Sobic006G224800--Sobic004G051200 Sobic002G295500 Sobic002G295500 Sobic006G224800--Sobic002G295500 Sobic002G430300 Sobic002G430300 Sobic006G224800--Sobic002G430300 Sobic002G153700 Sobic002G153700 Sobic009G119000--Sobic002G153700 Sobic003G059750 Sobic003G059750 Sobic009G119000--Sobic003G059750 Sobic002G071500 Sobic002G071500 Sobic009G119000--Sobic002G071500 Sobic010G065300 Sobic010G065300 Sobic009G119000--Sobic010G065300 Sobic008G153000 Sobic008G153000 Sobic009G119000--Sobic008G153000 Sobic010G275500 Sobic010G275500 Sobic009G119000--Sobic010G275500 Sobic009G119000--Sobic003G416700 Sobic004G048800 Sobic004G048800 Sobic009G119000--Sobic004G048800 Sobic001G311500 Sobic001G311500 Sobic009G119000--Sobic001G311500 Sobic002G245000--Sobic003G212900 Sobic007G000200 Sobic007G000200 Sobic002G245000--Sobic007G000200 Sobic002G029100 Sobic002G029100 Sobic002G245000--Sobic002G029100 Sobic001G542450 Sobic001G542450 Sobic002G245000--Sobic001G542450 Sobic001G135500 Sobic001G135500 Sobic002G245000--Sobic001G135500 Sobic002G245000--Sobic003G062300 Sobic008G002300 Sobic008G002300 Sobic002G245000--Sobic008G002300 Sobic002G245000--Sobic009G020500 Sobic006G032300 Sobic006G032300 Sobic002G245000--Sobic006G032300 Sobic010G186600 Sobic010G186600 Sobic009G255600--Sobic010G186600 Sobic009G255600--Sobic003G416700 Sobic003G214600 Sobic003G214600 Sobic009G255600--Sobic003G214600 Sobic005G200800 Sobic005G200800 Sobic009G255600--Sobic005G200800 Sobic009G255600--Sobic009G119000 Sobic009G255600--Sobic002G029100 Sobic003G042400 Sobic003G042400 Sobic009G255600--Sobic003G042400 Sobic001G291800 Sobic001G291800 Sobic009G255600--Sobic001G291800 Sobic003G360400 Sobic003G360400 Sobic009G255600--Sobic003G360400 Sobic003G062300--Sobic006G224800 Sobic004G309900 Sobic004G309900 Sobic003G062300--Sobic004G309900 Sobic002G145800 Sobic002G145800 Sobic003G062300--Sobic002G145800 Sobic003G062300--Sobic003G416700 Sobic005G220000 Sobic005G220000 Sobic003G062300--Sobic005G220000 Sobic001G051700 Sobic001G051700 Sobic003G062300--Sobic001G051700 Sobic002G164200 Sobic002G164200 Sobic003G062300--Sobic002G164200 Sobic003G062300--Sobic003G214600 Sobic007G183300 Sobic007G183300 Sobic003G062300--Sobic007G183300 Sobic009G182600 Sobic009G182600 Sobic009G126300--Sobic009G182600 Sobic001G493700 Sobic001G493700 Sobic009G126300--Sobic001G493700 Sobic007G168300 Sobic007G168300 Sobic009G126300--Sobic007G168300 Sobic001G137000 Sobic001G137000 Sobic009G126300--Sobic001G137000 Sobic002G179400 Sobic002G179400 Sobic009G126300--Sobic002G179400 Sobic004G088501 Sobic004G088501 Sobic009G126300--Sobic004G088501 Sobic009G126300--Sobic009G255600 Sobic001G117200 Sobic001G117200 Sobic009G126300--Sobic001G117200 Sobic002G388500 Sobic002G388500 Sobic009G126300--Sobic002G388500 Sobic002G422100--Sobic009G119000 Sobic002G422100--Sobic003G212900 Sobic002G422100--Sobic003G416700 Sobic001G134300 Sobic001G134300 Sobic002G422100--Sobic001G134300 Sobic001G346900 Sobic001G346900 Sobic002G422100--Sobic001G346900 Sobic010G001100 Sobic010G001100 Sobic002G422100--Sobic010G001100 Sobic001G091400 Sobic001G091400 Sobic002G422100--Sobic001G091400 Sobic002G154000 Sobic002G154000 Sobic002G422100--Sobic002G154000 Sobic001G063700 Sobic001G063700 Sobic002G422100--Sobic001G063700 Sobic003G212900--Sobic001G135500 Sobic010G077500 Sobic010G077500 Sobic003G212900--Sobic010G077500 Sobic003G212900--Sobic002G422100 Sobic003G212900--Sobic003G416700 Sobic001G042200 Sobic001G042200 Sobic003G212900--Sobic001G042200 Sobic003G212900--Sobic004G309900 Sobic003G212900--Sobic006G224800 Sobic008G058800 Sobic008G058800 Sobic003G212900--Sobic008G058800 Sobic003G212900--Sobic002G295500 Sobic002G344600--Sobic009G020500 Sobic001G509500 Sobic001G509500 Sobic002G344600--Sobic001G509500 Sobic002G380200 Sobic002G380200 Sobic002G344600--Sobic002G380200 Sobic002G344600--Sobic010G001100 Sobic002G396500 Sobic002G396500 Sobic002G344600--Sobic002G396500 Sobic002G344600--Sobic002G029100 Sobic002G344600--Sobic005G200800 Sobic008G098300 Sobic008G098300 Sobic002G344600--Sobic008G098300 Sobic004G105500 Sobic004G105500 Sobic002G344600--Sobic004G105500
Octagon: transcription factors


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