Gene annotation
Transcriptome id Sobic.010G130100.6,Sobic.010G130100.5,Sobic.010G130100.9,Sobic.010G130100.2,Sobic.010G130100.4,Sobic.010G130100.7,Sobic.010G130100.8
Synonym Sb10g011813
Functional annotation BAH domain containing protein, expressed
UniProt A0A194YIV3 , A0A1W0VSQ6 , A0A1W0VST5
Pfam PF01426 PF00628
Panther DB PTHR12321 PTHR12321:SF44 PTHR22880 PTHR22880:SF151
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0003682; chromatin binding GO:0005515protein binding


Orthologs (automatic annotation)
TAIR AT3G20280 : RING/FYVE/PHD zinc finger superfamily protein
RAP-DB (Rice) LOC_Os06g20410.1 : BAH domain containing protein, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat TraesCS7D02G225300
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G393900 FAD binding domain containing protein, expressed -
2 Sobic.007G168300 UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY, putative, expressed -
3 Sobic.002G374300 FAR1 family protein, expressed K17604: zinc finger SWIM domain-containing protein 3
4 Sobic.003G309050 - -
5 Sobic.007G000300 expressed protein -
6 Sobic.002G422100 EMB1011, putative, expressed K14317: NUP214, nuclear pore complex protein Nup214
7 Sobic.001G346900 RNA cap guanine-N2 methyltransferase domain containing protein, expressed K14292: trimethylguanosine synthase
8 Sobic.006G267600 elongation factor Tu, putative, expressed K14416: elongation factor 1 alpha-like protein
9 Sobic.002G154000 EDM2, putative, expressed -
10 Sobic.003G042400 - K12598: MTR4, ATP-dependent RNA helicase DOB1
11 Sobic.009G020500 expressed protein -
12 Sobic.002G052700 cyclophilin, putative, expressed K09566: peptidyl-prolyl isomerase G (cyclophilin G)
13 Sobic.003G016900 splicing factor 3B subunit 1, putative, expressed K12828: SF3B1, splicing factor 3B subunit 1
14 Sobic.003G360400 ulp1 protease family protein, putative, expressed K08596: sentrin-specific protease 7
15 Sobic.004G086200 peptidyl-prolyl cis-trans isomerase, putative, expressed K09566: peptidyl-prolyl isomerase G (cyclophilin G)
16 Sobic.003G062300 NF-X1-type zinc finger protein, putative, expressed K15683: NFXL1, NF-X1-type zinc finger protein NFXL1
17 Sobic.001G376900 utp14 protein, putative, expressed K14567: U3 small nucleolar RNA-associated protein 14
18 Sobic.004G309900 cold-induced protein, putative, expressed K13174: THO complex subunit 5
19 Sobic.002G263700 bromodomain protein 103, putative, expressed -
20 Sobic.004G049700 zinc finger C-x8-C-x5-C-x3-H type family protein, expressed -


Gene co-expression network
sample Sobic010G130100 Sobic010G130100 Sobic001G393900 Sobic001G393900 Sobic010G130100--Sobic001G393900 Sobic007G168300 Sobic007G168300 Sobic010G130100--Sobic007G168300 Sobic002G374300 Sobic002G374300 Sobic010G130100--Sobic002G374300 Sobic003G309050 Sobic003G309050 Sobic010G130100--Sobic003G309050 Sobic007G000300 Sobic007G000300 Sobic010G130100--Sobic007G000300 Sobic002G422100 Sobic002G422100 Sobic010G130100--Sobic002G422100 Sobic001G346900 Sobic001G346900 Sobic010G130100--Sobic001G346900 Sobic006G267600 Sobic006G267600 Sobic010G130100--Sobic006G267600 Sobic002G154000 Sobic002G154000 Sobic010G130100--Sobic002G154000 Sobic004G321700 Sobic004G321700 Sobic001G393900--Sobic004G321700 Sobic001G393900--Sobic006G267600 Sobic001G089600 Sobic001G089600 Sobic001G393900--Sobic001G089600 Sobic002G399800 Sobic002G399800 Sobic001G393900--Sobic002G399800 Sobic004G096400 Sobic004G096400 Sobic001G393900--Sobic004G096400 Sobic007G173500 Sobic007G173500 Sobic001G393900--Sobic007G173500 Sobic006G269800 Sobic006G269800 Sobic001G393900--Sobic006G269800 Sobic001G393900--Sobic003G309050 Sobic003G042400 Sobic003G042400 Sobic001G393900--Sobic003G042400 Sobic007G168300--Sobic003G042400 Sobic005G200800 Sobic005G200800 Sobic007G168300--Sobic005G200800 Sobic010G001100 Sobic010G001100 Sobic007G168300--Sobic010G001100 Sobic007G168300--Sobic002G154000 Sobic009G126300 Sobic009G126300 Sobic007G168300--Sobic009G126300 Sobic007G183300 Sobic007G183300 Sobic007G168300--Sobic007G183300 Sobic001G453000 Sobic001G453000 Sobic007G168300--Sobic001G453000 Sobic001G376900 Sobic001G376900 Sobic007G168300--Sobic001G376900 Sobic005G200900 Sobic005G200900 Sobic007G168300--Sobic005G200900 Sobic003G363700 Sobic003G363700 Sobic002G374300--Sobic003G363700 Sobic003G043000 Sobic003G043000 Sobic002G374300--Sobic003G043000 Sobic001G542450 Sobic001G542450 Sobic002G374300--Sobic001G542450 Sobic003G012000 Sobic003G012000 Sobic002G374300--Sobic003G012000 Sobic002G374300--Sobic002G154000 Sobic001G151100 Sobic001G151100 Sobic002G374300--Sobic001G151100 Sobic004G209700 Sobic004G209700 Sobic002G374300--Sobic004G209700 Sobic002G374300--Sobic001G393900 Sobic002G371700 Sobic002G371700 Sobic002G374300--Sobic002G371700 Sobic001G451300 Sobic001G451300 Sobic003G309050--Sobic001G451300 Sobic003G309050--Sobic001G393900 Sobic002G043100 Sobic002G043100 Sobic003G309050--Sobic002G043100 Sobic003G309050--Sobic002G399800 Sobic002G371600 Sobic002G371600 Sobic003G309050--Sobic002G371600 Sobic006G245900 Sobic006G245900 Sobic003G309050--Sobic006G245900 Sobic001G417500 Sobic001G417500 Sobic003G309050--Sobic001G417500 Sobic003G260400 Sobic003G260400 Sobic003G309050--Sobic003G260400 Sobic010G262100 Sobic010G262100 Sobic003G309050--Sobic010G262100 Sobic001G275300 Sobic001G275300 Sobic007G000300--Sobic001G275300 Sobic003G241700 Sobic003G241700 Sobic007G000300--Sobic003G241700 Sobic007G000300--Sobic001G393900 Sobic006G088200 Sobic006G088200 Sobic007G000300--Sobic006G088200 Sobic003G062300 Sobic003G062300 Sobic007G000300--Sobic003G062300 Sobic003G016900 Sobic003G016900 Sobic007G000300--Sobic003G016900 Sobic001G261900 Sobic001G261900 Sobic007G000300--Sobic001G261900 Sobic007G212300 Sobic007G212300 Sobic007G000300--Sobic007G212300 Sobic007G000300--Sobic007G173500 Sobic009G119000 Sobic009G119000 Sobic002G422100--Sobic009G119000 Sobic003G212900 Sobic003G212900 Sobic002G422100--Sobic003G212900 Sobic003G416700 Sobic003G416700 Sobic002G422100--Sobic003G416700 Sobic001G134300 Sobic001G134300 Sobic002G422100--Sobic001G134300 Sobic002G422100--Sobic001G346900 Sobic002G422100--Sobic010G001100 Sobic001G091400 Sobic001G091400 Sobic002G422100--Sobic001G091400 Sobic002G422100--Sobic002G154000 Sobic001G063700 Sobic001G063700 Sobic002G422100--Sobic001G063700 Sobic004G086200 Sobic004G086200 Sobic001G346900--Sobic004G086200 Sobic003G409200 Sobic003G409200 Sobic001G346900--Sobic003G409200 Sobic001G346900--Sobic001G134300 Sobic001G346900--Sobic003G042400 Sobic008G147200 Sobic008G147200 Sobic001G346900--Sobic008G147200 Sobic004G285000 Sobic004G285000 Sobic001G346900--Sobic004G285000 Sobic001G346900--Sobic003G416700 Sobic010G096000 Sobic010G096000 Sobic001G346900--Sobic010G096000 Sobic001G346900--Sobic002G422100 Sobic006G261400 Sobic006G261400 Sobic006G267600--Sobic006G261400 Sobic001G051700 Sobic001G051700 Sobic006G267600--Sobic001G051700 Sobic006G267600--Sobic001G393900 Sobic006G267600--Sobic002G154000 Sobic007G063000 Sobic007G063000 Sobic006G267600--Sobic007G063000 Sobic002G048700 Sobic002G048700 Sobic006G267600--Sobic002G048700 Sobic009G158100 Sobic009G158100 Sobic006G267600--Sobic009G158100 Sobic004G322400 Sobic004G322400 Sobic006G267600--Sobic004G322400 Sobic006G267600--Sobic003G416700 Sobic003G360400 Sobic003G360400 Sobic002G154000--Sobic003G360400 Sobic002G154000--Sobic003G416700 Sobic010G112100 Sobic010G112100 Sobic002G154000--Sobic010G112100 Sobic002G154000--Sobic001G063700 Sobic002G154000--Sobic010G001100 Sobic001G461400 Sobic001G461400 Sobic002G154000--Sobic001G461400 Sobic001G433800 Sobic001G433800 Sobic002G154000--Sobic001G433800 Sobic004G048800 Sobic004G048800 Sobic002G154000--Sobic004G048800 Sobic002G154000--Sobic007G063000
Octagon: transcription factors


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