Gene annotation
Transcriptome id Sobic.002G374300.3,Sobic.002G374300.2
Synonym Sb02g039200, FRS5
Functional annotation FAR1 family protein, expressed
UniProt A0A1W0W7F1 , A0A1W0W7B6
Pfam PF04434 PF00320 PF10551 PF03101
Panther DB PTHR31669 PTHR31669:SF13
NCBI CDD -
KEGG Orthology K17604; zinc finger SWIM domain-containing protein 3
Gene Ontology GO:0008270; zinc ion binding GO:0006355regulation of transcription, DNA-templated GO:0003700DNA-binding transcription factor activity


Orthologs (automatic annotation)
TAIR AT4G38180 : FAR1-related sequence 5
RAP-DB (Rice) LOC_Os07g42400.2 : transposon protein, putative, unclassified, expressed
MaizeGDB (Corn) -
Brachypodium KQK15126 , KQK15127 , KQK15128
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G363700 OsFBL5 - F-box domain and LRR containing protein, expressed -
2 Sobic.003G043000 expressed protein -
3 Sobic.001G542450 - -
4 Sobic.003G012000 GTPase of unknown function domain containing protein, putative, expressed -
5 Sobic.002G154000 EDM2, putative, expressed -
6 Sobic.001G151100 CCR4-NOT transcription factor, putative, expressed K12580: CNOT3, CCR4-NOT transcription complex subunit 3
7 Sobic.004G209700 FAR1 family protein, expressed -
8 Sobic.001G393900 FAD binding domain containing protein, expressed -
9 Sobic.002G371700 signal recognition particle 68 kDa protein, putative, expressed K03107: signal recognition particle subunit SRP68
10 Sobic.006G088200 nonsense-mediated decay UPF3, putative, expressed K14328: UPF3, regulator of nonsense transcripts 3
11 Sobic.003G217200 endonuclease/exonuclease/phosphatase family domain containing protein, expressed -
12 Sobic.004G243600 AAA-type ATPase family protein, putative, expressed -
13 Sobic.006G019300 F-box-like/WD repeat-containing protein TBL1XR1-A, putative, expressed K04508: transducin (beta)-like 1
14 Sobic.005G200800 homeobox domain containing protein, expressed -
15 Sobic.004G265500 SET domain protein SDG117, putative, expressed -
16 Sobic.006G245900 FAR1 family protein, expressed -
17 Sobic.001G248100 histone acetyltransferase GCN5, putative, expressed K06062: PCAF, KAT2, histone acetyltransferase
18 Sobic.007G018400 expressed protein -
19 Sobic.008G002300 ATSIZ1/SIZ1, putative, expressed -
20 Sobic.009G228000 ubiquitin-conjugating enzyme domain containing protein, expressed K10581: ubiquitin-conjugating enzyme E2 O


Gene co-expression network
sample Sobic002G374300 Sobic002G374300 Sobic003G363700 Sobic003G363700 Sobic002G374300--Sobic003G363700 Sobic003G043000 Sobic003G043000 Sobic002G374300--Sobic003G043000 Sobic001G542450 Sobic001G542450 Sobic002G374300--Sobic001G542450 Sobic003G012000 Sobic003G012000 Sobic002G374300--Sobic003G012000 Sobic002G154000 Sobic002G154000 Sobic002G374300--Sobic002G154000 Sobic001G151100 Sobic001G151100 Sobic002G374300--Sobic001G151100 Sobic004G209700 Sobic004G209700 Sobic002G374300--Sobic004G209700 Sobic001G393900 Sobic001G393900 Sobic002G374300--Sobic001G393900 Sobic002G371700 Sobic002G371700 Sobic002G374300--Sobic002G371700 Sobic003G379200 Sobic003G379200 Sobic003G363700--Sobic003G379200 Sobic001G237600 Sobic001G237600 Sobic003G363700--Sobic001G237600 Sobic004G265500 Sobic004G265500 Sobic003G363700--Sobic004G265500 Sobic003G363700--Sobic002G371700 Sobic009G228000 Sobic009G228000 Sobic003G363700--Sobic009G228000 Sobic003G363700--Sobic002G374300 Sobic003G363700--Sobic003G043000 Sobic010G000800 Sobic010G000800 Sobic003G363700--Sobic010G000800 Sobic003G182300 Sobic003G182300 Sobic003G363700--Sobic003G182300 Sobic003G043000--Sobic004G265500 Sobic001G308400 Sobic001G308400 Sobic003G043000--Sobic001G308400 Sobic003G296900 Sobic003G296900 Sobic003G043000--Sobic003G296900 Sobic004G357100 Sobic004G357100 Sobic003G043000--Sobic004G357100 Sobic003G241700 Sobic003G241700 Sobic003G043000--Sobic003G241700 Sobic003G043000--Sobic009G228000 SobicK028600 SobicK028600 Sobic003G043000--SobicK028600 Sobic003G163200 Sobic003G163200 Sobic003G043000--Sobic003G163200 Sobic002G227500 Sobic002G227500 Sobic003G043000--Sobic002G227500 Sobic008G002300 Sobic008G002300 Sobic001G542450--Sobic008G002300 Sobic003G416700 Sobic003G416700 Sobic001G542450--Sobic003G416700 Sobic002G145800 Sobic002G145800 Sobic001G542450--Sobic002G145800 Sobic003G217200 Sobic003G217200 Sobic001G542450--Sobic003G217200 Sobic003G062300 Sobic003G062300 Sobic001G542450--Sobic003G062300 Sobic006G224800 Sobic006G224800 Sobic001G542450--Sobic006G224800 Sobic002G295500 Sobic002G295500 Sobic001G542450--Sobic002G295500 Sobic001G461400 Sobic001G461400 Sobic001G542450--Sobic001G461400 Sobic006G166200 Sobic006G166200 Sobic001G542450--Sobic006G166200 Sobic010G059500 Sobic010G059500 Sobic003G012000--Sobic010G059500 Sobic003G308500 Sobic003G308500 Sobic003G012000--Sobic003G308500 Sobic003G012000--Sobic001G393900 Sobic003G146600 Sobic003G146600 Sobic003G012000--Sobic003G146600 Sobic004G096400 Sobic004G096400 Sobic003G012000--Sobic004G096400 Sobic001G405600 Sobic001G405600 Sobic003G012000--Sobic001G405600 Sobic003G012000--Sobic003G043000 Sobic006G234700 Sobic006G234700 Sobic003G012000--Sobic006G234700 Sobic003G256800 Sobic003G256800 Sobic003G012000--Sobic003G256800 Sobic003G360400 Sobic003G360400 Sobic002G154000--Sobic003G360400 Sobic002G154000--Sobic003G416700 Sobic010G112100 Sobic010G112100 Sobic002G154000--Sobic010G112100 Sobic001G063700 Sobic001G063700 Sobic002G154000--Sobic001G063700 Sobic010G001100 Sobic010G001100 Sobic002G154000--Sobic010G001100 Sobic002G154000--Sobic001G461400 Sobic001G433800 Sobic001G433800 Sobic002G154000--Sobic001G433800 Sobic004G048800 Sobic004G048800 Sobic002G154000--Sobic004G048800 Sobic007G063000 Sobic007G063000 Sobic002G154000--Sobic007G063000 Sobic001G058200 Sobic001G058200 Sobic001G151100--Sobic001G058200 Sobic001G151100--Sobic001G433800 Sobic005G167700 Sobic005G167700 Sobic001G151100--Sobic005G167700 Sobic001G087600 Sobic001G087600 Sobic001G151100--Sobic001G087600 Sobic002G308700 Sobic002G308700 Sobic001G151100--Sobic002G308700 Sobic005G162500 Sobic005G162500 Sobic001G151100--Sobic005G162500 Sobic002G133300 Sobic002G133300 Sobic001G151100--Sobic002G133300 Sobic001G542400 Sobic001G542400 Sobic001G151100--Sobic001G542400 Sobic004G248600 Sobic004G248600 Sobic001G151100--Sobic004G248600 Sobic004G209700--Sobic001G433800 Sobic004G209700--Sobic003G360400 Sobic006G096900 Sobic006G096900 Sobic004G209700--Sobic006G096900 Sobic004G209700--Sobic002G154000 Sobic010G226000 Sobic010G226000 Sobic004G209700--Sobic010G226000 Sobic004G209700--Sobic003G241700 Sobic009G044800 Sobic009G044800 Sobic004G209700--Sobic009G044800 Sobic009G092400 Sobic009G092400 Sobic004G209700--Sobic009G092400 Sobic002G083500 Sobic002G083500 Sobic004G209700--Sobic002G083500 Sobic004G321700 Sobic004G321700 Sobic001G393900--Sobic004G321700 Sobic006G267600 Sobic006G267600 Sobic001G393900--Sobic006G267600 Sobic001G089600 Sobic001G089600 Sobic001G393900--Sobic001G089600 Sobic002G399800 Sobic002G399800 Sobic001G393900--Sobic002G399800 Sobic001G393900--Sobic004G096400 Sobic007G173500 Sobic007G173500 Sobic001G393900--Sobic007G173500 Sobic006G269800 Sobic006G269800 Sobic001G393900--Sobic006G269800 Sobic003G309050 Sobic003G309050 Sobic001G393900--Sobic003G309050 Sobic003G042400 Sobic003G042400 Sobic001G393900--Sobic003G042400 Sobic008G103300 Sobic008G103300 Sobic002G371700--Sobic008G103300 Sobic004G053500 Sobic004G053500 Sobic002G371700--Sobic004G053500 Sobic002G371700--Sobic010G059500 Sobic002G142900 Sobic002G142900 Sobic002G371700--Sobic002G142900 Sobic004G131300 Sobic004G131300 Sobic002G371700--Sobic004G131300 Sobic002G401500 Sobic002G401500 Sobic002G371700--Sobic002G401500 Sobic005G110499 Sobic005G110499 Sobic002G371700--Sobic005G110499 Sobic002G371700--Sobic001G087600 Sobic002G371700--Sobic003G363700
Octagon: transcription factors


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