Gene annotation
Transcriptome id Sobic.007G000200.1
Synonym Sb07g000200
Functional annotation expressed protein
UniProt C5YLB9
Pfam PF05623
Panther DB PTHR32010 PTHR32010:SF8
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G49220 : Protein of unknown function (DUF789)
RAP-DB (Rice) LOC_Os04g57870.1 : expressed protein
MaizeGDB (Corn) Zm00025a033661
Brachypodium KQJ94738
Barley HORVU7Hr1G078850.8 , HORVU7Hr1G078850.1 , HORVU7Hr1G078850.2 , HORVU7Hr1G078850.4 , HORVU7Hr1G078850.7 , HORVU7Hr1G078850.6
Wheat TraesCS7D02G326500 , TraesCS7D02G326500 , TraesCS7B02G230300 , TraesCS7A02G329800
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G032300 HECT-domain domain containing protein, expressed K10590: E3 ubiquitin-protein ligase TRIP12
2 Sobic.003G046300 ubiquitin carboxyl-terminal hydrolase 14, putative, expressed K11836: USP5_13, ubiquitin carboxyl-terminal hydrolase 5/13
3 Sobic.008G002300 ATSIZ1/SIZ1, putative, expressed -
4 Sobic.002G245000 HECT-domain domain containing protein, expressed K10591: NEDD4, E3 ubiquitin-protein ligase NEDD4
5 Sobic.001G430400 Ser/Thr protein phosphatase family protein, putative, expressed -
6 Sobic.002G164200 PFT1, putative, expressed K15168: mediator of RNA polymerase II transcription subunit 25
7 Sobic.003G089000 ubiquitin conjugating enzyme protein, putative, expressed K10581: ubiquitin-conjugating enzyme E2 O
8 Sobic.001G542450 - -
9 Sobic.006G088200 nonsense-mediated decay UPF3, putative, expressed K14328: UPF3, regulator of nonsense transcripts 3
10 Sobic.002G295500 expressed protein -
11 Sobic.006G224800 expressed protein -
12 Sobic.002G029100 GYF domain containing protein, putative, expressed -
13 Sobic.004G053500 HEAT repeat family protein, putative, expressed K17263: CAND1, cullin-associated NEDD8-dissociated protein 1
14 Sobic.006G188500 uncharacterized mscS family protein, putative, expressed -
15 Sobic.009G255600 cleavage and polyadenylation specificity factor, putative, expressed K10610: DNA damage-binding protein 1
16 Sobic.002G142900 immunoglobulin/major histocompatibility complex, putative, expressed K12607: CCR4-NOT transcription complex subunit 10
17 Sobic.003G214600 transcriptional corepressor LEUNIG, putative, expressed -
18 Sobic.002G335600 eukaryotic translation initiation factor 4G, putative, expressed K03260: translation initiation factor 4G
19 Sobic.001G313700 expressed protein -
20 Sobic.007G028100 WD repeat-containing protein, putative, expressed -


Gene co-expression network
sample Sobic007G000200 Sobic007G000200 Sobic006G032300 Sobic006G032300 Sobic007G000200--Sobic006G032300 Sobic003G046300 Sobic003G046300 Sobic007G000200--Sobic003G046300 Sobic008G002300 Sobic008G002300 Sobic007G000200--Sobic008G002300 Sobic002G245000 Sobic002G245000 Sobic007G000200--Sobic002G245000 Sobic001G430400 Sobic001G430400 Sobic007G000200--Sobic001G430400 Sobic002G164200 Sobic002G164200 Sobic007G000200--Sobic002G164200 Sobic003G089000 Sobic003G089000 Sobic007G000200--Sobic003G089000 Sobic001G542450 Sobic001G542450 Sobic007G000200--Sobic001G542450 Sobic006G088200 Sobic006G088200 Sobic007G000200--Sobic006G088200 Sobic002G335600 Sobic002G335600 Sobic006G032300--Sobic002G335600 Sobic008G088872 Sobic008G088872 Sobic006G032300--Sobic008G088872 Sobic004G053500 Sobic004G053500 Sobic006G032300--Sobic004G053500 Sobic007G018400 Sobic007G018400 Sobic006G032300--Sobic007G018400 Sobic001G273700 Sobic001G273700 Sobic006G032300--Sobic001G273700 Sobic002G042600 Sobic002G042600 Sobic006G032300--Sobic002G042600 Sobic001G191700 Sobic001G191700 Sobic006G032300--Sobic001G191700 Sobic009G131300 Sobic009G131300 Sobic006G032300--Sobic009G131300 Sobic002G429300 Sobic002G429300 Sobic006G032300--Sobic002G429300 Sobic006G188500 Sobic006G188500 Sobic003G046300--Sobic006G188500 Sobic008G103300 Sobic008G103300 Sobic003G046300--Sobic008G103300 Sobic002G142900 Sobic002G142900 Sobic003G046300--Sobic002G142900 Sobic002G371700 Sobic002G371700 Sobic003G046300--Sobic002G371700 Sobic003G132000 Sobic003G132000 Sobic003G046300--Sobic003G132000 Sobic003G046300--Sobic007G000200 Sobic002G263600 Sobic002G263600 Sobic003G046300--Sobic002G263600 Sobic001G455800 Sobic001G455800 Sobic003G046300--Sobic001G455800 Sobic001G487100 Sobic001G487100 Sobic003G046300--Sobic001G487100 Sobic008G002300--Sobic007G000200 Sobic008G002300--Sobic001G542450 Sobic008G002300--Sobic006G088200 Sobic001G178300 Sobic001G178300 Sobic008G002300--Sobic001G178300 Sobic008G002300--Sobic006G032300 Sobic002G029100 Sobic002G029100 Sobic008G002300--Sobic002G029100 Sobic002G256700 Sobic002G256700 Sobic008G002300--Sobic002G256700 Sobic008G002300--Sobic002G245000 Sobic001G493700 Sobic001G493700 Sobic008G002300--Sobic001G493700 Sobic003G212900 Sobic003G212900 Sobic002G245000--Sobic003G212900 Sobic002G245000--Sobic007G000200 Sobic002G245000--Sobic002G029100 Sobic002G245000--Sobic001G542450 Sobic001G135500 Sobic001G135500 Sobic002G245000--Sobic001G135500 Sobic003G062300 Sobic003G062300 Sobic002G245000--Sobic003G062300 Sobic002G245000--Sobic008G002300 Sobic009G020500 Sobic009G020500 Sobic002G245000--Sobic009G020500 Sobic002G245000--Sobic006G032300 Sobic001G430400--Sobic002G256700 Sobic008G144900 Sobic008G144900 Sobic001G430400--Sobic008G144900 Sobic008G087866 Sobic008G087866 Sobic001G430400--Sobic008G087866 Sobic001G430400--Sobic001G191700 Sobic001G117200 Sobic001G117200 Sobic001G430400--Sobic001G117200 Sobic001G430400--Sobic006G032300 Sobic001G430400--Sobic007G000200 Sobic001G277900 Sobic001G277900 Sobic001G430400--Sobic001G277900 Sobic002G371300 Sobic002G371300 Sobic001G430400--Sobic002G371300 Sobic007G183300 Sobic007G183300 Sobic002G164200--Sobic007G183300 Sobic002G164200--Sobic003G062300 Sobic009G182600 Sobic009G182600 Sobic002G164200--Sobic009G182600 Sobic006G224800 Sobic006G224800 Sobic002G164200--Sobic006G224800 Sobic001G051700 Sobic001G051700 Sobic002G164200--Sobic001G051700 Sobic005G133800 Sobic005G133800 Sobic002G164200--Sobic005G133800 Sobic002G164200--Sobic002G029100 Sobic002G164200--Sobic007G000200 Sobic005G200800 Sobic005G200800 Sobic002G164200--Sobic005G200800 Sobic004G177300 Sobic004G177300 Sobic003G089000--Sobic004G177300 Sobic003G089000--Sobic006G032300 Sobic003G089000--Sobic002G335600 Sobic010G072800 Sobic010G072800 Sobic003G089000--Sobic010G072800 Sobic003G089000--Sobic001G273700 Sobic003G089000--Sobic002G142900 Sobic001G263600 Sobic001G263600 Sobic003G089000--Sobic001G263600 Sobic001G375600 Sobic001G375600 Sobic003G089000--Sobic001G375600 Sobic003G089000--Sobic007G000200 Sobic001G542450--Sobic008G002300 Sobic003G416700 Sobic003G416700 Sobic001G542450--Sobic003G416700 Sobic002G145800 Sobic002G145800 Sobic001G542450--Sobic002G145800 Sobic003G217200 Sobic003G217200 Sobic001G542450--Sobic003G217200 Sobic001G542450--Sobic003G062300 Sobic001G542450--Sobic006G224800 Sobic002G295500 Sobic002G295500 Sobic001G542450--Sobic002G295500 Sobic001G461400 Sobic001G461400 Sobic001G542450--Sobic001G461400 Sobic006G166200 Sobic006G166200 Sobic001G542450--Sobic006G166200 Sobic003G095900 Sobic003G095900 Sobic006G088200--Sobic003G095900 Sobic003G360400 Sobic003G360400 Sobic006G088200--Sobic003G360400 Sobic006G088200--Sobic001G493700 Sobic001G275300 Sobic001G275300 Sobic006G088200--Sobic001G275300 Sobic002G133300 Sobic002G133300 Sobic006G088200--Sobic002G133300 Sobic003G379200 Sobic003G379200 Sobic006G088200--Sobic003G379200 Sobic003G214600 Sobic003G214600 Sobic006G088200--Sobic003G214600 Sobic001G433800 Sobic001G433800 Sobic006G088200--Sobic001G433800 Sobic001G227400 Sobic001G227400 Sobic006G088200--Sobic001G227400
Octagon: transcription factors


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