Gene annotation
Transcriptome id Sobic.003G084000.1,Sobic.003G084000.2,Sobic.003G084000.3,Sobic.003G084000.4
Synonym GLT1, PGLCT, Sb03g007080
Functional annotation transporter family protein, putative, expressed
UniProt A0A1B6Q226 , A0A1B6Q208
Pfam PF07690
Panther DB PTHR23500 PTHR23500:SF118
NCBI CDD KOG0254; Predicted transporter (major facilitator superfamily)
KEGG Orthology -
Gene Ontology GO:0016021; integral component of membrane


Orthologs (automatic annotation)
TAIR AT5G16150 : plastidic GLC translocator
RAP-DB (Rice) LOC_Os01g04190.1,LOC_Os01g04190.2 : transporter family protein, putative, expressed
MaizeGDB (Corn) Zm00025a035571 , Zm00025a023591
Brachypodium KQK02551 , KQK02552
Barley HORVU3Hr1G007190.6 , HORVU3Hr1G007190.7 , HORVU3Hr1G007190.5 , HORVU3Hr1G007190.2 , HORVU3Hr1G007190.3 , HORVU3Hr1G007190.1 , HORVU3Hr1G007190.8 , HORVU3Hr1G007190.9 , HORVU3Hr1G007190.4 , HORVU3Hr1G007190.10 , HORVU3Hr1G007190.11
Wheat TraesCS3D02G043500 , TraesCS3D02G043500 , TraesCS3B02G047300 , TraesCS3B02G047300 , TraesCS3A02G036600 , TraesCS3A02G036600
Populus PNT40433 , PNT40432 , PNT40431 , PNT40430


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cDNA sequences
Sobic.003G084000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G212600 expressed protein K00294: 1-pyrroline-5-carboxylate dehydrogenase
2 Sobic.009G208100 CAMK_KIN1/SNF1/Nim1_like_AMPKh.3 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K07198: PRKAA, 5'-AMP-activated protein kinase, catalytic alpha subunit
3 Sobic.004G032800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@CGMC_MAPKCMGC_2.7 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed K04371: ERK, mitogen-activated protein kinase 1/3
4 Sobic.002G313900 potassium transporter, putative, expressed -
5 Sobic.003G338300 - -
6 Sobic.005G197100 acyltransferase, putative, expressed K13523: lysophosphatidic acid acyltransferase / lysophosphatidylinositol acyltransferase
7 Sobic.005G079900 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@F-box domain containing protein, expressed -
8 Sobic.003G304200 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@phospholipase, patatin family, putative, expressed K14674: TAG lipase / steryl ester hydrolase / phospholipase A2 / LPA acyltransferase
9 Sobic.009G166600 nucleoside-triphosphatase, putative, expressed -
10 Sobic.004G096700 xaa-Pro dipeptidase, putative, expressed K14213: Xaa-Pro dipeptidase
11 Sobic.001G375600 transmembrane protein, putative, expressed -
12 Sobic.006G139100 polyadenylate-binding protein, putative, expressed K13126: polyadenylate-binding protein
13 Sobic.004G112900 expressed protein -
14 Sobic.005G090300 glycerophosphoryl diester phosphodiesterase family protein, putative, expressed -
15 Sobic.003G226200 neutral ceramidase precursor, putative, expressed K12349: neutral ceramidase
16 Sobic.002G301100 PQ loop repeat domain containing protein, expressed K09660: mannose-P-dolichol utilization defect 1
17 Sobic.009G234800 aspartic proteinase oryzasin-1 precursor, putative, expressed K08245: phytepsin
18 Sobic.010G072800 exportin-7-A, putative, expressed K18460: XPO7, exportin-7
19 Sobic.005G058900 zinc finger, C3HC4 type domain containing protein, expressed -
20 Sobic.003G089000 ubiquitin conjugating enzyme protein, putative, expressed K10581: ubiquitin-conjugating enzyme E2 O


Gene co-expression network
sample Sobic003G084000 Sobic003G084000 Sobic009G212600 Sobic009G212600 Sobic003G084000--Sobic009G212600 Sobic009G208100 Sobic009G208100 Sobic003G084000--Sobic009G208100 Sobic004G032800 Sobic004G032800 Sobic003G084000--Sobic004G032800 Sobic002G313900 Sobic002G313900 Sobic003G084000--Sobic002G313900 Sobic003G338300 Sobic003G338300 Sobic003G084000--Sobic003G338300 Sobic005G197100 Sobic005G197100 Sobic003G084000--Sobic005G197100 Sobic005G079900 Sobic005G079900 Sobic003G084000--Sobic005G079900 Sobic003G304200 Sobic003G304200 Sobic003G084000--Sobic003G304200 Sobic009G166600 Sobic009G166600 Sobic003G084000--Sobic009G166600 Sobic009G212600--Sobic003G084000 Sobic009G212600--Sobic005G197100 Sobic009G212600--Sobic004G032800 Sobic009G212600--Sobic009G166600 Sobic009G212600--Sobic003G304200 Sobic001G130200 Sobic001G130200 Sobic009G212600--Sobic001G130200 Sobic004G096700 Sobic004G096700 Sobic009G212600--Sobic004G096700 Sobic003G226200 Sobic003G226200 Sobic009G212600--Sobic003G226200 Sobic006G139000 Sobic006G139000 Sobic009G212600--Sobic006G139000 Sobic009G208100--Sobic002G313900 Sobic003G284000 Sobic003G284000 Sobic009G208100--Sobic003G284000 Sobic009G208100--Sobic003G084000 Sobic001G478800 Sobic001G478800 Sobic009G208100--Sobic001G478800 Sobic001G477700 Sobic001G477700 Sobic009G208100--Sobic001G477700 Sobic006G139100 Sobic006G139100 Sobic009G208100--Sobic006G139100 Sobic010G072800 Sobic010G072800 Sobic009G208100--Sobic010G072800 Sobic001G375600 Sobic001G375600 Sobic009G208100--Sobic001G375600 Sobic004G228800 Sobic004G228800 Sobic009G208100--Sobic004G228800 Sobic004G032800--Sobic003G084000 Sobic004G032800--Sobic009G212600 Sobic004G032800--Sobic005G197100 Sobic004G032800--Sobic009G166600 Sobic004G032800--Sobic002G313900 Sobic004G160700 Sobic004G160700 Sobic004G032800--Sobic004G160700 Sobic007G065500 Sobic007G065500 Sobic004G032800--Sobic007G065500 Sobic004G032800--Sobic005G079900 Sobic010G020700 Sobic010G020700 Sobic004G032800--Sobic010G020700 Sobic002G313900--Sobic009G166600 Sobic002G313900--Sobic009G208100 Sobic002G313900--Sobic006G139100 Sobic002G292900 Sobic002G292900 Sobic002G313900--Sobic002G292900 Sobic006G210700 Sobic006G210700 Sobic002G313900--Sobic006G210700 Sobic008G021000 Sobic008G021000 Sobic002G313900--Sobic008G021000 Sobic009G249700 Sobic009G249700 Sobic002G313900--Sobic009G249700 Sobic002G313900--Sobic001G478800 Sobic003G212900 Sobic003G212900 Sobic002G313900--Sobic003G212900 Sobic003G338300--Sobic003G084000 Sobic002G160400 Sobic002G160400 Sobic003G338300--Sobic002G160400 Sobic004G188800 Sobic004G188800 Sobic003G338300--Sobic004G188800 Sobic003G338300--Sobic009G212600 Sobic003G338300--Sobic005G079900 Sobic001G395700 Sobic001G395700 Sobic003G338300--Sobic001G395700 Sobic005G046250 Sobic005G046250 Sobic003G338300--Sobic005G046250 Sobic003G029800 Sobic003G029800 Sobic003G338300--Sobic003G029800 Sobic009G234800 Sobic009G234800 Sobic003G338300--Sobic009G234800 Sobic005G197100--Sobic009G166600 Sobic005G197100--Sobic009G212600 Sobic005G197100--Sobic004G160700 Sobic005G197100--Sobic002G292900 Sobic001G005600 Sobic001G005600 Sobic005G197100--Sobic001G005600 Sobic003G150900 Sobic003G150900 Sobic005G197100--Sobic003G150900 Sobic005G197100--Sobic002G313900 Sobic005G197100--Sobic008G021000 Sobic005G197100--Sobic006G139100 Sobic004G101900 Sobic004G101900 Sobic005G079900--Sobic004G101900 Sobic005G079900--Sobic009G234800 Sobic005G231900 Sobic005G231900 Sobic005G079900--Sobic005G231900 Sobic003G303300 Sobic003G303300 Sobic005G079900--Sobic003G303300 Sobic001G488500 Sobic001G488500 Sobic005G079900--Sobic001G488500 Sobic001G512800 Sobic001G512800 Sobic005G079900--Sobic001G512800 Sobic002G215700 Sobic002G215700 Sobic005G079900--Sobic002G215700 Sobic007G068100 Sobic007G068100 Sobic005G079900--Sobic007G068100 Sobic004G246200 Sobic004G246200 Sobic005G079900--Sobic004G246200 Sobic007G088100 Sobic007G088100 Sobic003G304200--Sobic007G088100 Sobic008G061100 Sobic008G061100 Sobic003G304200--Sobic008G061100 Sobic001G436900 Sobic001G436900 Sobic003G304200--Sobic001G436900 Sobic002G058500 Sobic002G058500 Sobic003G304200--Sobic002G058500 Sobic003G304200--Sobic001G375600 Sobic001G227800 Sobic001G227800 Sobic003G304200--Sobic001G227800 Sobic001G279100 Sobic001G279100 Sobic003G304200--Sobic001G279100 Sobic006G004500 Sobic006G004500 Sobic003G304200--Sobic006G004500 Sobic003G005600 Sobic003G005600 Sobic003G304200--Sobic003G005600 Sobic009G166600--Sobic002G313900 Sobic005G114800 Sobic005G114800 Sobic009G166600--Sobic005G114800 Sobic009G166600--Sobic006G210700 Sobic009G166600--Sobic005G197100 Sobic009G166600--Sobic009G249700 Sobic009G166600--Sobic008G021000 Sobic003G394200 Sobic003G394200 Sobic009G166600--Sobic003G394200 Sobic009G166600--Sobic002G292900 Sobic006G128100 Sobic006G128100 Sobic009G166600--Sobic006G128100
Octagon: transcription factors


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