Gene annotation
Transcriptome id Sobic.009G212600.1
Synonym Sb09g026810, P5CDH, ALDH12A1, ATP5CDH
Functional annotation expressed protein
UniProt C5YUI9
Pfam PF00171
Panther DB PTHR11699 PTHR11699:SF148
NCBI CDD KOG2451; Aldehyde dehydrogenase
KEGG Orthology K00294; 1-pyrroline-5-carboxylate dehydrogenase
Gene Ontology GO:0016491; oxidoreductase activity GO:0008152metabolic process


Orthologs (automatic annotation)
TAIR AT5G62530 : aldehyde dehydrogenase 12A1
RAP-DB (Rice) LOC_Os12g40440.1 : expressed protein
MaizeGDB (Corn) Zm00025a044372
Brachypodium PNT70813 , KQK05184
Barley HORVU1Hr1G080320.3 , HORVU1Hr1G080320.6 , HORVU1Hr1G080320.4 , HORVU1Hr1G080320.5 , HORVU1Hr1G080320.2 , HORVU1Hr1G080320.1
Wheat TraesCS1D02G362700 , TraesCS1B02G374500 , TraesCS1B02G374500 , TraesCS1A02G357900 , TraesCS1A02G357900
Populus -


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cDNA sequences
Sobic.009G212600


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G084000 transporter family protein, putative, expressed -
2 Sobic.005G197100 acyltransferase, putative, expressed K13523: lysophosphatidic acid acyltransferase / lysophosphatidylinositol acyltransferase
3 Sobic.004G032800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@CGMC_MAPKCMGC_2.7 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed K04371: ERK, mitogen-activated protein kinase 1/3
4 Sobic.009G166600 nucleoside-triphosphatase, putative, expressed -
5 Sobic.003G304200 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@phospholipase, patatin family, putative, expressed K14674: TAG lipase / steryl ester hydrolase / phospholipase A2 / LPA acyltransferase
6 Sobic.001G130200 DUF1336 domain containing protein, expressed -
7 Sobic.004G096700 xaa-Pro dipeptidase, putative, expressed K14213: Xaa-Pro dipeptidase
8 Sobic.003G226200 neutral ceramidase precursor, putative, expressed K12349: neutral ceramidase
9 Sobic.006G139000 carboxyvinyl-carboxyphosphonate phosphorylmutase, putative, expressed -
10 Sobic.008G021000 exostosin family domain containing protein, expressed -
11 Sobic.001G103300 calcium-transporting ATPase 3, endoplasmic reticulum-type, putative, expressed K05853: P-type Ca2+ transporter type 2A
12 Sobic.002G313900 potassium transporter, putative, expressed -
13 Sobic.003G338300 - -
14 Sobic.002G426300 actin, putative, expressed K17260: ACTR2, actin-related protein 2
15 Sobic.010G020700 expressed protein -
16 Sobic.001G478800 expressed protein -
17 Sobic.002G058500 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@FAD-linked oxidoreductase protein, putative, expressed K18204: D-2-hydroxyglutarate dehydrogenase
18 Sobic.005G079900 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@F-box domain containing protein, expressed -
19 Sobic.005G114800 protein transport protein, putative, expressed K14007: protein transport protein SEC24
20 Sobic.008G061100 expressed protein -


Gene co-expression network
sample Sobic009G212600 Sobic009G212600 Sobic003G084000 Sobic003G084000 Sobic009G212600--Sobic003G084000 Sobic005G197100 Sobic005G197100 Sobic009G212600--Sobic005G197100 Sobic004G032800 Sobic004G032800 Sobic009G212600--Sobic004G032800 Sobic009G166600 Sobic009G166600 Sobic009G212600--Sobic009G166600 Sobic003G304200 Sobic003G304200 Sobic009G212600--Sobic003G304200 Sobic001G130200 Sobic001G130200 Sobic009G212600--Sobic001G130200 Sobic004G096700 Sobic004G096700 Sobic009G212600--Sobic004G096700 Sobic003G226200 Sobic003G226200 Sobic009G212600--Sobic003G226200 Sobic006G139000 Sobic006G139000 Sobic009G212600--Sobic006G139000 Sobic003G084000--Sobic009G212600 Sobic009G208100 Sobic009G208100 Sobic003G084000--Sobic009G208100 Sobic003G084000--Sobic004G032800 Sobic002G313900 Sobic002G313900 Sobic003G084000--Sobic002G313900 Sobic003G338300 Sobic003G338300 Sobic003G084000--Sobic003G338300 Sobic003G084000--Sobic005G197100 Sobic005G079900 Sobic005G079900 Sobic003G084000--Sobic005G079900 Sobic003G084000--Sobic003G304200 Sobic003G084000--Sobic009G166600 Sobic005G197100--Sobic009G166600 Sobic005G197100--Sobic009G212600 Sobic004G160700 Sobic004G160700 Sobic005G197100--Sobic004G160700 Sobic002G292900 Sobic002G292900 Sobic005G197100--Sobic002G292900 Sobic001G005600 Sobic001G005600 Sobic005G197100--Sobic001G005600 Sobic003G150900 Sobic003G150900 Sobic005G197100--Sobic003G150900 Sobic005G197100--Sobic002G313900 Sobic008G021000 Sobic008G021000 Sobic005G197100--Sobic008G021000 Sobic006G139100 Sobic006G139100 Sobic005G197100--Sobic006G139100 Sobic004G032800--Sobic003G084000 Sobic004G032800--Sobic009G212600 Sobic004G032800--Sobic005G197100 Sobic004G032800--Sobic009G166600 Sobic004G032800--Sobic002G313900 Sobic004G032800--Sobic004G160700 Sobic007G065500 Sobic007G065500 Sobic004G032800--Sobic007G065500 Sobic004G032800--Sobic005G079900 Sobic010G020700 Sobic010G020700 Sobic004G032800--Sobic010G020700 Sobic009G166600--Sobic002G313900 Sobic005G114800 Sobic005G114800 Sobic009G166600--Sobic005G114800 Sobic006G210700 Sobic006G210700 Sobic009G166600--Sobic006G210700 Sobic009G166600--Sobic005G197100 Sobic009G249700 Sobic009G249700 Sobic009G166600--Sobic009G249700 Sobic009G166600--Sobic008G021000 Sobic003G394200 Sobic003G394200 Sobic009G166600--Sobic003G394200 Sobic009G166600--Sobic002G292900 Sobic006G128100 Sobic006G128100 Sobic009G166600--Sobic006G128100 Sobic007G088100 Sobic007G088100 Sobic003G304200--Sobic007G088100 Sobic008G061100 Sobic008G061100 Sobic003G304200--Sobic008G061100 Sobic001G436900 Sobic001G436900 Sobic003G304200--Sobic001G436900 Sobic002G058500 Sobic002G058500 Sobic003G304200--Sobic002G058500 Sobic001G375600 Sobic001G375600 Sobic003G304200--Sobic001G375600 Sobic001G227800 Sobic001G227800 Sobic003G304200--Sobic001G227800 Sobic001G279100 Sobic001G279100 Sobic003G304200--Sobic001G279100 Sobic006G004500 Sobic006G004500 Sobic003G304200--Sobic006G004500 Sobic003G005600 Sobic003G005600 Sobic003G304200--Sobic003G005600 Sobic001G130200--Sobic009G166600 Sobic003G381600 Sobic003G381600 Sobic001G130200--Sobic003G381600 Sobic006G224300 Sobic006G224300 Sobic001G130200--Sobic006G224300 Sobic003G398400 Sobic003G398400 Sobic001G130200--Sobic003G398400 Sobic001G424900 Sobic001G424900 Sobic001G130200--Sobic001G424900 Sobic008G173400 Sobic008G173400 Sobic001G130200--Sobic008G173400 Sobic010G243400 Sobic010G243400 Sobic001G130200--Sobic010G243400 Sobic007G158900 Sobic007G158900 Sobic001G130200--Sobic007G158900 Sobic001G130200--Sobic003G394200 Sobic002G295700 Sobic002G295700 Sobic004G096700--Sobic002G295700 Sobic001G399700 Sobic001G399700 Sobic004G096700--Sobic001G399700 SobicK043400 SobicK043400 Sobic004G096700--SobicK043400 Sobic002G301100 Sobic002G301100 Sobic004G096700--Sobic002G301100 Sobic009G054600 Sobic009G054600 Sobic004G096700--Sobic009G054600 Sobic010G133400 Sobic010G133400 Sobic004G096700--Sobic010G133400 Sobic001G501900 Sobic001G501900 Sobic004G096700--Sobic001G501900 Sobic004G254800 Sobic004G254800 Sobic004G096700--Sobic004G254800 Sobic010G171000 Sobic010G171000 Sobic004G096700--Sobic010G171000 Sobic009G234800 Sobic009G234800 Sobic003G226200--Sobic009G234800 Sobic003G226200--Sobic002G058500 Sobic003G226200--Sobic005G079900 Sobic007G041400 Sobic007G041400 Sobic003G226200--Sobic007G041400 Sobic001G265600 Sobic001G265600 Sobic003G226200--Sobic001G265600 Sobic002G415900 Sobic002G415900 Sobic003G226200--Sobic002G415900 Sobic007G068100 Sobic007G068100 Sobic003G226200--Sobic007G068100 Sobic002G215700 Sobic002G215700 Sobic003G226200--Sobic002G215700 Sobic004G101900 Sobic004G101900 Sobic003G226200--Sobic004G101900 Sobic006G139000--Sobic002G058500 Sobic001G417600 Sobic001G417600 Sobic006G139000--Sobic001G417600 Sobic001G280000 Sobic001G280000 Sobic006G139000--Sobic001G280000 Sobic005G019800 Sobic005G019800 Sobic006G139000--Sobic005G019800 Sobic001G395700 Sobic001G395700 Sobic006G139000--Sobic001G395700 Sobic006G139000--Sobic003G226200 Sobic006G139000--Sobic005G197100 Sobic006G139000--Sobic003G304200 Sobic009G055600 Sobic009G055600 Sobic006G139000--Sobic009G055600
Octagon: transcription factors


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