Gene annotation
Transcriptome id Sobic.004G032800.4,Sobic.004G032800.3
Synonym Sb04g002830, MPK9
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
CGMC_MAPKCMGC_2.7 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed
UniProt C5XTX3
Pfam PF06293
Panther DB PTHR24055 PTHR24055:SF202
NCBI CDD KOG0660; Mitogen-activated protein kinase
KEGG Orthology K04371; ERK, mitogen-activated protein kinase 1/3
Gene Ontology GO:0016773; phosphotransferase activity, alcohol group as acceptor GO:0016020membrane GO:0005524ATP binding


Orthologs (automatic annotation)
TAIR AT3G18040 : MAP kinase 9
RAP-DB (Rice) LOC_Os02g04230.3,LOC_Os02g04230.1 : CGMC_MAPKCMGC_2.7 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed
MaizeGDB (Corn) Zm00025a041760 , Zm00025a035014
Brachypodium KQK17477 , PNT75923
Barley HORVU7Hr1G095810.8 , HORVU7Hr1G095810.9 , HORVU7Hr1G095810.4 , HORVU7Hr1G095810.5 , HORVU7Hr1G095810.7 , HORVU7Hr1G095810.1 , HORVU7Hr1G095810.2 , HORVU7Hr1G095810.3 , HORVU6Hr1G017820.4 , HORVU6Hr1G017820.5 , HORVU6Hr1G017820.2 , HORVU6Hr1G017820.3 , HORVU6Hr1G017820.1 , HORVU7Hr1G095810.19 , HORVU7Hr1G095810.22 , HORVU7Hr1G095810.20 , HORVU7Hr1G095810.18 , HORVU7Hr1G095810.16 , HORVU7Hr1G095810.17 , HORVU7Hr1G095810.14 , HORVU7Hr1G095810.15 , HORVU7Hr1G095810.12 , HORVU7Hr1G095810.13 , HORVU7Hr1G095810.10 , HORVU7Hr1G095810.11
Wheat TraesCS6B02G127800 , TraesCS7D02G403700 , TraesCS7D02G403700 , TraesCS7B02G309900 , TraesCS7A02G410700 , TraesCS7A02G410700 , TraesCS6A02G099600 , TraesCS6D02G082900 , TraesCS6D02G082900
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G084000 transporter family protein, putative, expressed -
2 Sobic.009G212600 expressed protein K00294: 1-pyrroline-5-carboxylate dehydrogenase
3 Sobic.005G197100 acyltransferase, putative, expressed K13523: lysophosphatidic acid acyltransferase / lysophosphatidylinositol acyltransferase
4 Sobic.009G166600 nucleoside-triphosphatase, putative, expressed -
5 Sobic.002G313900 potassium transporter, putative, expressed -
6 Sobic.004G160700 TUDOR protein with multiple SNc domains, putative, expressed K15979: staphylococcal nuclease domain-containing protein 1
7 Sobic.007G065500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@phosphate/phosphate translocator, putative, expressed K15283: solute carrier family 35, member E1
8 Sobic.005G079900 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@F-box domain containing protein, expressed -
9 Sobic.010G020700 expressed protein -
10 Sobic.004G112900 expressed protein -
11 Sobic.002G236400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@auxin-independent growth promoter protein, putative, expressed -
12 Sobic.006G146200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./early senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@Os4bglu18 - monolignol beta-glucoside homologue, expressed K05350: beta-glucosidase
13 Sobic.006G139000 carboxyvinyl-carboxyphosphonate phosphorylmutase, putative, expressed -
14 Sobic.004G096700 xaa-Pro dipeptidase, putative, expressed K14213: Xaa-Pro dipeptidase
15 Sobic.002G058500 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@FAD-linked oxidoreductase protein, putative, expressed K18204: D-2-hydroxyglutarate dehydrogenase
16 Sobic.003G338300 - -
17 Sobic.005G058900 zinc finger, C3HC4 type domain containing protein, expressed -
18 Sobic.001G524000 CBS domain containing protein, expressed K16302: metal transporter CNNM
19 Sobic.006G139100 polyadenylate-binding protein, putative, expressed K13126: polyadenylate-binding protein
20 Sobic.009G234800 aspartic proteinase oryzasin-1 precursor, putative, expressed K08245: phytepsin


Gene co-expression network
sample Sobic004G032800 Sobic004G032800 Sobic003G084000 Sobic003G084000 Sobic004G032800--Sobic003G084000 Sobic009G212600 Sobic009G212600 Sobic004G032800--Sobic009G212600 Sobic005G197100 Sobic005G197100 Sobic004G032800--Sobic005G197100 Sobic009G166600 Sobic009G166600 Sobic004G032800--Sobic009G166600 Sobic002G313900 Sobic002G313900 Sobic004G032800--Sobic002G313900 Sobic004G160700 Sobic004G160700 Sobic004G032800--Sobic004G160700 Sobic007G065500 Sobic007G065500 Sobic004G032800--Sobic007G065500 Sobic005G079900 Sobic005G079900 Sobic004G032800--Sobic005G079900 Sobic010G020700 Sobic010G020700 Sobic004G032800--Sobic010G020700 Sobic003G084000--Sobic009G212600 Sobic009G208100 Sobic009G208100 Sobic003G084000--Sobic009G208100 Sobic003G084000--Sobic004G032800 Sobic003G084000--Sobic002G313900 Sobic003G338300 Sobic003G338300 Sobic003G084000--Sobic003G338300 Sobic003G084000--Sobic005G197100 Sobic003G084000--Sobic005G079900 Sobic003G304200 Sobic003G304200 Sobic003G084000--Sobic003G304200 Sobic003G084000--Sobic009G166600 Sobic009G212600--Sobic003G084000 Sobic009G212600--Sobic005G197100 Sobic009G212600--Sobic004G032800 Sobic009G212600--Sobic009G166600 Sobic009G212600--Sobic003G304200 Sobic001G130200 Sobic001G130200 Sobic009G212600--Sobic001G130200 Sobic004G096700 Sobic004G096700 Sobic009G212600--Sobic004G096700 Sobic003G226200 Sobic003G226200 Sobic009G212600--Sobic003G226200 Sobic006G139000 Sobic006G139000 Sobic009G212600--Sobic006G139000 Sobic005G197100--Sobic009G166600 Sobic005G197100--Sobic009G212600 Sobic005G197100--Sobic004G160700 Sobic002G292900 Sobic002G292900 Sobic005G197100--Sobic002G292900 Sobic001G005600 Sobic001G005600 Sobic005G197100--Sobic001G005600 Sobic003G150900 Sobic003G150900 Sobic005G197100--Sobic003G150900 Sobic005G197100--Sobic002G313900 Sobic008G021000 Sobic008G021000 Sobic005G197100--Sobic008G021000 Sobic006G139100 Sobic006G139100 Sobic005G197100--Sobic006G139100 Sobic009G166600--Sobic002G313900 Sobic005G114800 Sobic005G114800 Sobic009G166600--Sobic005G114800 Sobic006G210700 Sobic006G210700 Sobic009G166600--Sobic006G210700 Sobic009G166600--Sobic005G197100 Sobic009G249700 Sobic009G249700 Sobic009G166600--Sobic009G249700 Sobic009G166600--Sobic008G021000 Sobic003G394200 Sobic003G394200 Sobic009G166600--Sobic003G394200 Sobic009G166600--Sobic002G292900 Sobic006G128100 Sobic006G128100 Sobic009G166600--Sobic006G128100 Sobic002G313900--Sobic009G166600 Sobic002G313900--Sobic009G208100 Sobic002G313900--Sobic006G139100 Sobic002G313900--Sobic002G292900 Sobic002G313900--Sobic006G210700 Sobic002G313900--Sobic008G021000 Sobic002G313900--Sobic009G249700 Sobic001G478800 Sobic001G478800 Sobic002G313900--Sobic001G478800 Sobic003G212900 Sobic003G212900 Sobic002G313900--Sobic003G212900 Sobic004G160700--Sobic005G197100 Sobic003G004500 Sobic003G004500 Sobic004G160700--Sobic003G004500 Sobic007G018200 Sobic007G018200 Sobic004G160700--Sobic007G018200 Sobic004G160700--Sobic009G166600 Sobic004G160700--Sobic005G114800 Sobic001G524000 Sobic001G524000 Sobic004G160700--Sobic001G524000 Sobic008G160500 Sobic008G160500 Sobic004G160700--Sobic008G160500 Sobic002G322400 Sobic002G322400 Sobic004G160700--Sobic002G322400 Sobic006G257600 Sobic006G257600 Sobic004G160700--Sobic006G257600 Sobic006G220500 Sobic006G220500 Sobic007G065500--Sobic006G220500 Sobic007G120800 Sobic007G120800 Sobic007G065500--Sobic007G120800 Sobic002G194800 Sobic002G194800 Sobic007G065500--Sobic002G194800 Sobic006G259401 Sobic006G259401 Sobic007G065500--Sobic006G259401 Sobic009G139800 Sobic009G139800 Sobic007G065500--Sobic009G139800 Sobic003G432100 Sobic003G432100 Sobic007G065500--Sobic003G432100 Sobic009G234800 Sobic009G234800 Sobic007G065500--Sobic009G234800 Sobic003G428200 Sobic003G428200 Sobic007G065500--Sobic003G428200 Sobic001G000400 Sobic001G000400 Sobic007G065500--Sobic001G000400 Sobic004G101900 Sobic004G101900 Sobic005G079900--Sobic004G101900 Sobic005G079900--Sobic009G234800 Sobic005G231900 Sobic005G231900 Sobic005G079900--Sobic005G231900 Sobic003G303300 Sobic003G303300 Sobic005G079900--Sobic003G303300 Sobic001G488500 Sobic001G488500 Sobic005G079900--Sobic001G488500 Sobic001G512800 Sobic001G512800 Sobic005G079900--Sobic001G512800 Sobic002G215700 Sobic002G215700 Sobic005G079900--Sobic002G215700 Sobic007G068100 Sobic007G068100 Sobic005G079900--Sobic007G068100 Sobic004G246200 Sobic004G246200 Sobic005G079900--Sobic004G246200 Sobic010G020700--Sobic001G512800 Sobic006G244400 Sobic006G244400 Sobic010G020700--Sobic006G244400 Sobic010G020700--Sobic005G079900 Sobic010G020700--Sobic009G212600 Sobic009G241000 Sobic009G241000 Sobic010G020700--Sobic009G241000 Sobic001G227800 Sobic001G227800 Sobic010G020700--Sobic001G227800 Sobic010G020700--Sobic002G215700 Sobic003G259200 Sobic003G259200 Sobic010G020700--Sobic003G259200 Sobic010G182500 Sobic010G182500 Sobic010G020700--Sobic010G182500
Octagon: transcription factors


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