Gene annotation
Transcriptome id Sobic.004G160700.1
Synonym Tudor1, AtTudor1, TSN1, Sb04g021280
Functional annotation TUDOR protein with multiple SNc domains, putative, expressed
UniProt C5XTA6
Pfam PF00567 PF00565
Panther DB PTHR12302 PTHR12302:SF2
NCBI CDD -
KEGG Orthology K15979; staphylococcal nuclease domain-containing protein 1
Gene Ontology GO:0003712; transcription coregulator activity


Orthologs (automatic annotation)
TAIR AT5G07350 : TUDOR-SN protein 1
RAP-DB (Rice) LOC_Os02g32350.2 : TUDOR protein with multiple SNc domains, putative, expressed
MaizeGDB (Corn) Zm00025a031319 , Zm00025a020492
Brachypodium KQJ97124 , KQJ97123 , KQK13720
Barley HORVU4Hr1G005100.8 , HORVU4Hr1G005100.9 , HORVU4Hr1G005100.1 , HORVU4Hr1G005100.2 , HORVU4Hr1G005100.4 , HORVU4Hr1G005100.5 , HORVU4Hr1G005100.6 , HORVU4Hr1G005100.10 , HORVU4Hr1G005100.3 , HORVU4Hr1G005100.7
Wheat TraesCS4B02G031500 , TraesCS4A02G281500 , TraesCS5D02G522100 , TraesCS4D02G029200
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G197100 acyltransferase, putative, expressed K13523: lysophosphatidic acid acyltransferase / lysophosphatidylinositol acyltransferase
2 Sobic.003G004500 helix-loop-helix DNA-binding domain containing protein, expressed -
3 Sobic.007G018200 RNA recognition motif containing protein, putative, expressed -
4 Sobic.009G166600 nucleoside-triphosphatase, putative, expressed -
5 Sobic.005G114800 protein transport protein, putative, expressed K14007: protein transport protein SEC24
6 Sobic.001G524000 CBS domain containing protein, expressed K16302: metal transporter CNNM
7 Sobic.008G160500 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@tesmin/TSO1-like CXC domain containing protein, expressed -
8 Sobic.002G322400 OsPDIL5-4 protein disulfide isomerase PDIL5-4, expressed -
9 Sobic.006G257600 ubiquitin carboxyl-terminal hydrolase, family 1, putative, expressed K05609: UCHL3, ubiquitin carboxyl-terminal hydrolase L3
10 Sobic.006G141600 dehydrogenase, putative, expressed K00031: IDH1, IDH2, isocitrate dehydrogenase
11 Sobic.003G284700 trehalose synthase, putative, expressed K16055: trehalose 6-phosphate synthase/phosphatase
12 Sobic.006G100266 - -
13 Sobic.003G206600 glycine-rich protein, putative, expressed -
14 Sobic.002G292900 protein binding protein, putative, expressed -
15 Sobic.003G004600 expressed protein -
16 Sobic.005G050600 protein of unknown function domain containing protein, expressed -
17 Sobic.003G150900 protein transport protein-related, putative, expressed -
18 Sobic.009G069200 glycine-rich protein, putative, expressed -
19 Sobic.003G255700 ubiquitin-conjugating enzyme domain containing protein, expressed K10581: ubiquitin-conjugating enzyme E2 O
20 Sobic.001G452100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@caleosin related protein, putative, expressed K17991: peroxygenase


Gene co-expression network
sample Sobic004G160700 Sobic004G160700 Sobic005G197100 Sobic005G197100 Sobic004G160700--Sobic005G197100 Sobic003G004500 Sobic003G004500 Sobic004G160700--Sobic003G004500 Sobic007G018200 Sobic007G018200 Sobic004G160700--Sobic007G018200 Sobic009G166600 Sobic009G166600 Sobic004G160700--Sobic009G166600 Sobic005G114800 Sobic005G114800 Sobic004G160700--Sobic005G114800 Sobic001G524000 Sobic001G524000 Sobic004G160700--Sobic001G524000 Sobic008G160500 Sobic008G160500 Sobic004G160700--Sobic008G160500 Sobic002G322400 Sobic002G322400 Sobic004G160700--Sobic002G322400 Sobic006G257600 Sobic006G257600 Sobic004G160700--Sobic006G257600 Sobic005G197100--Sobic009G166600 Sobic009G212600 Sobic009G212600 Sobic005G197100--Sobic009G212600 Sobic005G197100--Sobic004G160700 Sobic002G292900 Sobic002G292900 Sobic005G197100--Sobic002G292900 Sobic001G005600 Sobic001G005600 Sobic005G197100--Sobic001G005600 Sobic003G150900 Sobic003G150900 Sobic005G197100--Sobic003G150900 Sobic002G313900 Sobic002G313900 Sobic005G197100--Sobic002G313900 Sobic008G021000 Sobic008G021000 Sobic005G197100--Sobic008G021000 Sobic006G139100 Sobic006G139100 Sobic005G197100--Sobic006G139100 Sobic010G250900 Sobic010G250900 Sobic003G004500--Sobic010G250900 Sobic005G050600 Sobic005G050600 Sobic003G004500--Sobic005G050600 Sobic008G064250 Sobic008G064250 Sobic003G004500--Sobic008G064250 Sobic003G425600 Sobic003G425600 Sobic003G004500--Sobic003G425600 Sobic005G083160 Sobic005G083160 Sobic003G004500--Sobic005G083160 Sobic005G032400 Sobic005G032400 Sobic003G004500--Sobic005G032400 Sobic010G107300 Sobic010G107300 Sobic003G004500--Sobic010G107300 Sobic001G233900 Sobic001G233900 Sobic003G004500--Sobic001G233900 Sobic003G004500--Sobic007G018200 Sobic007G018200--Sobic003G004500 Sobic001G517500 Sobic001G517500 Sobic007G018200--Sobic001G517500 Sobic007G018200--Sobic001G005600 Sobic007G018200--Sobic004G160700 Sobic007G046200 Sobic007G046200 Sobic007G018200--Sobic007G046200 Sobic004G068500 Sobic004G068500 Sobic007G018200--Sobic004G068500 Sobic004G180900 Sobic004G180900 Sobic007G018200--Sobic004G180900 Sobic002G277300 Sobic002G277300 Sobic007G018200--Sobic002G277300 Sobic007G018200--Sobic008G160500 Sobic009G166600--Sobic002G313900 Sobic009G166600--Sobic005G114800 Sobic006G210700 Sobic006G210700 Sobic009G166600--Sobic006G210700 Sobic009G166600--Sobic005G197100 Sobic009G249700 Sobic009G249700 Sobic009G166600--Sobic009G249700 Sobic009G166600--Sobic008G021000 Sobic003G394200 Sobic003G394200 Sobic009G166600--Sobic003G394200 Sobic009G166600--Sobic002G292900 Sobic006G128100 Sobic006G128100 Sobic009G166600--Sobic006G128100 Sobic005G114800--Sobic003G150900 Sobic005G114800--Sobic009G166600 Sobic005G110499 Sobic005G110499 Sobic005G114800--Sobic005G110499 Sobic001G393700 Sobic001G393700 Sobic005G114800--Sobic001G393700 Sobic001G474400 Sobic001G474400 Sobic005G114800--Sobic001G474400 Sobic001G103300 Sobic001G103300 Sobic005G114800--Sobic001G103300 Sobic005G114800--Sobic003G394200 Sobic001G445500 Sobic001G445500 Sobic005G114800--Sobic001G445500 Sobic006G224800 Sobic006G224800 Sobic005G114800--Sobic006G224800 Sobic001G524000--Sobic009G166600 Sobic001G524000--Sobic005G197100 Sobic001G524000--Sobic004G160700 Sobic003G331100 Sobic003G331100 Sobic001G524000--Sobic003G331100 Sobic006G141300 Sobic006G141300 Sobic001G524000--Sobic006G141300 Sobic006G063700 Sobic006G063700 Sobic001G524000--Sobic006G063700 Sobic003G304200 Sobic003G304200 Sobic001G524000--Sobic003G304200 Sobic001G524000--Sobic003G425600 Sobic003G284700 Sobic003G284700 Sobic001G524000--Sobic003G284700 Sobic003G062400 Sobic003G062400 Sobic008G160500--Sobic003G062400 Sobic008G160500--Sobic001G005600 Sobic009G030400 Sobic009G030400 Sobic008G160500--Sobic009G030400 Sobic006G120800 Sobic006G120800 Sobic008G160500--Sobic006G120800 Sobic002G359900 Sobic002G359900 Sobic008G160500--Sobic002G359900 Sobic002G403200 Sobic002G403200 Sobic008G160500--Sobic002G403200 Sobic008G160500--Sobic003G004500 Sobic009G258400 Sobic009G258400 Sobic008G160500--Sobic009G258400 Sobic001G033400 Sobic001G033400 Sobic008G160500--Sobic001G033400 Sobic002G274700 Sobic002G274700 Sobic002G322400--Sobic002G274700 Sobic007G153500 Sobic007G153500 Sobic002G322400--Sobic007G153500 Sobic001G455000 Sobic001G455000 Sobic002G322400--Sobic001G455000 Sobic004G198300 Sobic004G198300 Sobic002G322400--Sobic004G198300 Sobic006G100266 Sobic006G100266 Sobic002G322400--Sobic006G100266 Sobic008G019532 Sobic008G019532 Sobic002G322400--Sobic008G019532 Sobic005G087300 Sobic005G087300 Sobic002G322400--Sobic005G087300 Sobic002G313100 Sobic002G313100 Sobic002G322400--Sobic002G313100 Sobic002G392400 Sobic002G392400 Sobic002G322400--Sobic002G392400 Sobic009G113100 Sobic009G113100 Sobic006G257600--Sobic009G113100 Sobic003G055200 Sobic003G055200 Sobic006G257600--Sobic003G055200 Sobic002G315100 Sobic002G315100 Sobic006G257600--Sobic002G315100 Sobic002G354800 Sobic002G354800 Sobic006G257600--Sobic002G354800 Sobic010G223500 Sobic010G223500 Sobic006G257600--Sobic010G223500 Sobic009G069200 Sobic009G069200 Sobic006G257600--Sobic009G069200 Sobic002G306600 Sobic002G306600 Sobic006G257600--Sobic002G306600 Sobic006G015500 Sobic006G015500 Sobic006G257600--Sobic006G015500 Sobic006G257600--Sobic003G284700
Octagon: transcription factors


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