Gene annotation
Transcriptome id Sobic.003G247200.1
Synonym Sb03g030360
Functional annotation pterin-4-alpha-carbinolamine dehydratase, putative, expressed
UniProt A0A1B6Q550
Pfam PF01329
Panther DB PTHR12599 PTHR12599:SF2
NCBI CDD KOG4073; Pterin carbinolamine dehydratase PCBD/dimerization cofactor of HNF1
KEGG Orthology -
Gene Ontology GO:0008124; 4-alpha-hydroxytetrahydrobiopterin dehydratase activity GO:0006729tetrahydrobiopterin biosynthetic process


Orthologs (automatic annotation)
TAIR AT1G29810 : Transcriptional coactivator/pterin dehydratase
RAP-DB (Rice) LOC_Os01g47420.1 : pterin-4-alpha-carbinolamine dehydratase, putative, expressed
MaizeGDB (Corn) Zm00025a028146
Brachypodium -
Barley -
Wheat TraesCS6D02G297400 , TraesCS6B02G348200 , TraesCS6A02G318200 , TraesCS6A02G318200 , TraesCS6A02G318200 , TraesCS6A02G318200
Populus -


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cDNA sequences
Sobic.003G247200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G208100 CAMK_KIN1/SNF1/Nim1_like_AMPKh.3 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K07198: PRKAA, 5'-AMP-activated protein kinase, catalytic alpha subunit
2 Sobic.001G223300 expressed protein -
3 Sobic.004G259000 fimbrin-like protein 2, putative, expressed -
4 Sobic.004G330000 - K14807: DDX51, ATP-dependent RNA helicase DDX51/DBP6
5 Sobic.003G284700 trehalose synthase, putative, expressed K16055: trehalose 6-phosphate synthase/phosphatase
6 Sobic.006G004500 arginase, putative, expressed K01476: E3.5.3.1, rocF, arginase
7 Sobic.003G089000 ubiquitin conjugating enzyme protein, putative, expressed K10581: ubiquitin-conjugating enzyme E2 O
8 Sobic.007G028100 WD repeat-containing protein, putative, expressed -
9 Sobic.001G458100 DNA methyltransferase protein, putative, expressed -
10 Sobic.004G317300 "O1(Ortholog in maize:Wang et al., 2012)"(PubMedID : 31659891)@XI-I, putative, expressed K10357: myosin V
11 Sobic.003G084000 transporter family protein, putative, expressed -
12 Sobic.002G104300 FAS1, putative, expressed K10750: chromatin assembly factor 1 subunit A
13 Sobic.003G004300 KH domain containing protein, putative, expressed K13162: poly(rC)-binding protein 2
14 Sobic.006G240400 zinc finger, C3HC4 type domain containing protein, expressed -
15 Sobic.001G524000 CBS domain containing protein, expressed K16302: metal transporter CNNM
16 Sobic.010G188800 EF hand family protein, putative, expressed K13448: calcium-binding protein CML
17 Sobic.009G043400 OsFBL60 - F-box domain and LRR containing protein, expressed K10268: F-box and leucine-rich repeat protein 2/20
18 Sobic.002G313900 potassium transporter, putative, expressed -
19 Sobic.006G200500 expressed protein -
20 Sobic.005G050600 protein of unknown function domain containing protein, expressed -


Gene co-expression network
sample Sobic003G247200 Sobic003G247200 Sobic009G208100 Sobic009G208100 Sobic003G247200--Sobic009G208100 Sobic001G223300 Sobic001G223300 Sobic003G247200--Sobic001G223300 Sobic004G259000 Sobic004G259000 Sobic003G247200--Sobic004G259000 Sobic004G330000 Sobic004G330000 Sobic003G247200--Sobic004G330000 Sobic003G284700 Sobic003G284700 Sobic003G247200--Sobic003G284700 Sobic006G004500 Sobic006G004500 Sobic003G247200--Sobic006G004500 Sobic003G089000 Sobic003G089000 Sobic003G247200--Sobic003G089000 Sobic007G028100 Sobic007G028100 Sobic003G247200--Sobic007G028100 Sobic001G458100 Sobic001G458100 Sobic003G247200--Sobic001G458100 Sobic002G313900 Sobic002G313900 Sobic009G208100--Sobic002G313900 Sobic003G284000 Sobic003G284000 Sobic009G208100--Sobic003G284000 Sobic003G084000 Sobic003G084000 Sobic009G208100--Sobic003G084000 Sobic001G478800 Sobic001G478800 Sobic009G208100--Sobic001G478800 Sobic001G477700 Sobic001G477700 Sobic009G208100--Sobic001G477700 Sobic006G139100 Sobic006G139100 Sobic009G208100--Sobic006G139100 Sobic010G072800 Sobic010G072800 Sobic009G208100--Sobic010G072800 Sobic001G375600 Sobic001G375600 Sobic009G208100--Sobic001G375600 Sobic004G228800 Sobic004G228800 Sobic009G208100--Sobic004G228800 Sobic002G106000 Sobic002G106000 Sobic001G223300--Sobic002G106000 Sobic006G141300 Sobic006G141300 Sobic001G223300--Sobic006G141300 Sobic002G419000 Sobic002G419000 Sobic001G223300--Sobic002G419000 Sobic001G223300--Sobic003G247200 Sobic007G080200 Sobic007G080200 Sobic001G223300--Sobic007G080200 Sobic002G406300 Sobic002G406300 Sobic001G223300--Sobic002G406300 Sobic002G400300 Sobic002G400300 Sobic001G223300--Sobic002G400300 Sobic002G014200 Sobic002G014200 Sobic001G223300--Sobic002G014200 Sobic001G223300--Sobic004G259000 Sobic009G099200 Sobic009G099200 Sobic004G259000--Sobic009G099200 Sobic002G193300 Sobic002G193300 Sobic004G259000--Sobic002G193300 Sobic004G259000--Sobic003G284700 Sobic003G318700 Sobic003G318700 Sobic004G259000--Sobic003G318700 Sobic006G210700 Sobic006G210700 Sobic004G259000--Sobic006G210700 Sobic010G086600 Sobic010G086600 Sobic004G259000--Sobic010G086600 Sobic004G160700 Sobic004G160700 Sobic004G259000--Sobic004G160700 Sobic004G259000--Sobic009G208100 Sobic002G292900 Sobic002G292900 Sobic004G259000--Sobic002G292900 Sobic004G330000--Sobic010G086600 Sobic004G330000--Sobic002G193300 Sobic007G042900 Sobic007G042900 Sobic004G330000--Sobic007G042900 Sobic002G369701 Sobic002G369701 Sobic004G330000--Sobic002G369701 Sobic004G330000--Sobic002G313900 Sobic001G340300 Sobic001G340300 Sobic004G330000--Sobic001G340300 Sobic008G002300 Sobic008G002300 Sobic004G330000--Sobic008G002300 Sobic001G542450 Sobic001G542450 Sobic004G330000--Sobic001G542450 Sobic003G132000 Sobic003G132000 Sobic004G330000--Sobic003G132000 Sobic001G278700 Sobic001G278700 Sobic003G284700--Sobic001G278700 Sobic003G055200 Sobic003G055200 Sobic003G284700--Sobic003G055200 Sobic003G284700--Sobic006G210700 Sobic010G273800 Sobic010G273800 Sobic003G284700--Sobic010G273800 Sobic006G257600 Sobic006G257600 Sobic003G284700--Sobic006G257600 Sobic003G284700--Sobic004G160700 Sobic002G354800 Sobic002G354800 Sobic003G284700--Sobic002G354800 Sobic002G104300 Sobic002G104300 Sobic003G284700--Sobic002G104300 Sobic004G340566 Sobic004G340566 Sobic003G284700--Sobic004G340566 Sobic004G237400 Sobic004G237400 Sobic006G004500--Sobic004G237400 Sobic001G436900 Sobic001G436900 Sobic006G004500--Sobic001G436900 Sobic006G004500--Sobic003G089000 Sobic002G058500 Sobic002G058500 Sobic006G004500--Sobic002G058500 Sobic002G105200 Sobic002G105200 Sobic006G004500--Sobic002G105200 Sobic006G004500--Sobic007G028100 Sobic007G000200 Sobic007G000200 Sobic006G004500--Sobic007G000200 Sobic009G113000 Sobic009G113000 Sobic006G004500--Sobic009G113000 Sobic007G060000 Sobic007G060000 Sobic006G004500--Sobic007G060000 Sobic004G177300 Sobic004G177300 Sobic003G089000--Sobic004G177300 Sobic006G032300 Sobic006G032300 Sobic003G089000--Sobic006G032300 Sobic002G335600 Sobic002G335600 Sobic003G089000--Sobic002G335600 Sobic003G089000--Sobic010G072800 Sobic001G273700 Sobic001G273700 Sobic003G089000--Sobic001G273700 Sobic002G142900 Sobic002G142900 Sobic003G089000--Sobic002G142900 Sobic001G263600 Sobic001G263600 Sobic003G089000--Sobic001G263600 Sobic003G089000--Sobic001G375600 Sobic003G089000--Sobic007G000200 Sobic002G314900 Sobic002G314900 Sobic007G028100--Sobic002G314900 Sobic007G028100--Sobic004G237400 Sobic007G028100--Sobic007G000200 Sobic006G115466 Sobic006G115466 Sobic007G028100--Sobic006G115466 Sobic007G028100--Sobic003G089000 Sobic007G028100--Sobic006G004500 Sobic007G028100--Sobic001G436900 Sobic002G382600 Sobic002G382600 Sobic007G028100--Sobic002G382600 Sobic009G069000 Sobic009G069000 Sobic007G028100--Sobic009G069000 Sobic008G096000 Sobic008G096000 Sobic001G458100--Sobic008G096000 Sobic001G367700 Sobic001G367700 Sobic001G458100--Sobic001G367700 Sobic001G196700 Sobic001G196700 Sobic001G458100--Sobic001G196700 Sobic005G110445 Sobic005G110445 Sobic001G458100--Sobic005G110445 Sobic004G317300 Sobic004G317300 Sobic001G458100--Sobic004G317300 Sobic001G341001 Sobic001G341001 Sobic001G458100--Sobic001G341001 Sobic009G132600 Sobic009G132600 Sobic001G458100--Sobic009G132600 Sobic008G109700 Sobic008G109700 Sobic001G458100--Sobic008G109700 Sobic004G176700 Sobic004G176700 Sobic001G458100--Sobic004G176700
Octagon: transcription factors


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