Gene annotation
Transcriptome id Sobic.001G458100.1
Synonym DMT7, DRM2, Sb01g043010
Functional annotation DNA methyltransferase protein, putative, expressed
UniProt C5WSU3
Pfam PF00627 PF00145
Panther DB PTHR23068 PTHR23068:SF3
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G14620 : domains rearranged methyltransferase 2
RAP-DB (Rice) LOC_Os03g02010.4 : DNA methyltransferase protein, putative, expressed
MaizeGDB (Corn) Zm00025a000188
Brachypodium KQK24054 , KQJ86464
Barley HORVU5Hr1G068970.39 , HORVU5Hr1G068970.38 , HORVU5Hr1G068970.33 , HORVU5Hr1G068970.32 , HORVU5Hr1G068970.31 , HORVU5Hr1G068970.30 , HORVU5Hr1G068970.37 , HORVU5Hr1G068970.36 , HORVU5Hr1G068970.35 , HORVU5Hr1G068970.28 , HORVU5Hr1G068970.29 , HORVU5Hr1G068970.20 , HORVU5Hr1G068970.21 , HORVU5Hr1G068970.22 , HORVU5Hr1G068970.23 , HORVU5Hr1G068970.24 , HORVU5Hr1G068970.25 , HORVU5Hr1G068970.26 , HORVU5Hr1G068970.27 , HORVU5Hr1G068970.19 , HORVU5Hr1G068970.18 , HORVU5Hr1G068970.15 , HORVU5Hr1G068970.14 , HORVU5Hr1G068970.17 , HORVU5Hr1G068970.16 , HORVU5Hr1G068970.40
Wheat TraesCS5D02G248300 , TraesCS5D02G248300 , TraesCS5B02G239800 , TraesCS5B02G239800
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G096000 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in leaf and root"(PubMedID : 20499123)@auxin response factor, putative, expressed -
2 Sobic.001G367700 rhythmically expressed gene 2 protein, putative, expressed -
3 Sobic.001G196700 OsProCP3 - Putative Lysosomal Pro-x Carboxypeptidase homologue, expressed -
4 Sobic.005G110445 - -
5 Sobic.004G317300 "O1(Ortholog in maize:Wang et al., 2012)"(PubMedID : 31659891)@XI-I, putative, expressed K10357: myosin V
6 Sobic.001G341001 - -
7 Sobic.009G132600 methyl-binding domain protein MBD, putative, expressed -
8 Sobic.008G109700 oxidoreductase, 2OG-Fe oxygenase family protein, putative, expressed K18054: 2'-deoxymugineic-acid 2'-dioxygenase / mugineic-acid 3-dioxygenase
9 Sobic.004G176700 ACT domain containing protein, putative, expressed -
10 Sobic.006G200500 expressed protein -
11 Sobic.001G319800 cytochrome P450, putative, expressed -
12 Sobic.001G039900 KH domain containing protein, putative, expressed K14945: protein quaking
13 Sobic.002G078500 LTPL169 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
14 Sobic.003G247200 pterin-4-alpha-carbinolamine dehydratase, putative, expressed -
15 Sobic.008G088200 DnaK family protein, putative, expressed -
16 Sobic.003G338000 non-green plastid inner envelope membrane protein, putative, expressed -
17 Sobic.003G425600 - -
18 Sobic.009G207500 OsFBX238 - F-box domain containing protein, expressed -
19 Sobic.006G004500 arginase, putative, expressed K01476: E3.5.3.1, rocF, arginase
20 Sobic.006G132400 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@CHIT3 - Chitinase family protein precursor, expressed K01183: chitinase


Gene co-expression network
sample Sobic001G458100 Sobic001G458100 Sobic008G096000 Sobic008G096000 Sobic001G458100--Sobic008G096000 Sobic001G367700 Sobic001G367700 Sobic001G458100--Sobic001G367700 Sobic001G196700 Sobic001G196700 Sobic001G458100--Sobic001G196700 Sobic005G110445 Sobic005G110445 Sobic001G458100--Sobic005G110445 Sobic004G317300 Sobic004G317300 Sobic001G458100--Sobic004G317300 Sobic001G341001 Sobic001G341001 Sobic001G458100--Sobic001G341001 Sobic009G132600 Sobic009G132600 Sobic001G458100--Sobic009G132600 Sobic008G109700 Sobic008G109700 Sobic001G458100--Sobic008G109700 Sobic004G176700 Sobic004G176700 Sobic001G458100--Sobic004G176700 Sobic004G311400 Sobic004G311400 Sobic008G096000--Sobic004G311400 Sobic002G029100 Sobic002G029100 Sobic008G096000--Sobic002G029100 Sobic008G088200 Sobic008G088200 Sobic008G096000--Sobic008G088200 Sobic008G096000--Sobic004G317300 Sobic008G145800 Sobic008G145800 Sobic008G096000--Sobic008G145800 Sobic003G038100 Sobic003G038100 Sobic008G096000--Sobic003G038100 Sobic001G041400 Sobic001G041400 Sobic008G096000--Sobic001G041400 Sobic008G057000 Sobic008G057000 Sobic008G096000--Sobic008G057000 Sobic006G019300 Sobic006G019300 Sobic008G096000--Sobic006G019300 Sobic001G367700--Sobic001G196700 Sobic003G242200 Sobic003G242200 Sobic001G367700--Sobic003G242200 Sobic001G367700--Sobic005G110445 Sobic001G394100 Sobic001G394100 Sobic001G367700--Sobic001G394100 Sobic005G199300 Sobic005G199300 Sobic001G367700--Sobic005G199300 Sobic003G392500 Sobic003G392500 Sobic001G367700--Sobic003G392500 Sobic009G010000 Sobic009G010000 Sobic001G367700--Sobic009G010000 Sobic009G013400 Sobic009G013400 Sobic001G367700--Sobic009G013400 Sobic010G142300 Sobic010G142300 Sobic001G367700--Sobic010G142300 Sobic006G132400 Sobic006G132400 Sobic001G196700--Sobic006G132400 Sobic001G196700--Sobic001G367700 Sobic010G168500 Sobic010G168500 Sobic001G196700--Sobic010G168500 Sobic003G376000 Sobic003G376000 Sobic001G196700--Sobic003G376000 Sobic002G077600 Sobic002G077600 Sobic001G196700--Sobic002G077600 Sobic007G049400 Sobic007G049400 Sobic001G196700--Sobic007G049400 Sobic001G112250 Sobic001G112250 Sobic001G196700--Sobic001G112250 Sobic005G112066 Sobic005G112066 Sobic001G196700--Sobic005G112066 Sobic001G253501 Sobic001G253501 Sobic001G196700--Sobic001G253501 Sobic003G213300 Sobic003G213300 Sobic005G110445--Sobic003G213300 Sobic005G169300 Sobic005G169300 Sobic005G110445--Sobic005G169300 Sobic001G381250 Sobic001G381250 Sobic005G110445--Sobic001G381250 Sobic005G100700 Sobic005G100700 Sobic004G317300--Sobic005G100700 Sobic004G317300--Sobic002G029100 Sobic003G214600 Sobic003G214600 Sobic004G317300--Sobic003G214600 Sobic004G317300--Sobic006G019300 Sobic003G388100 Sobic003G388100 Sobic004G317300--Sobic003G388100 Sobic001G277900 Sobic001G277900 Sobic004G317300--Sobic001G277900 Sobic010G089400 Sobic010G089400 Sobic004G317300--Sobic010G089400 Sobic006G169800 Sobic006G169800 Sobic004G317300--Sobic006G169800 Sobic003G360400 Sobic003G360400 Sobic004G317300--Sobic003G360400 Sobic001G341001--Sobic002G077600 Sobic005G174900 Sobic005G174900 Sobic001G341001--Sobic005G174900 Sobic007G025300 Sobic007G025300 Sobic001G341001--Sobic007G025300 Sobic009G245750 Sobic009G245750 Sobic001G341001--Sobic009G245750 Sobic001G341001--Sobic001G253501 Sobic001G249233 Sobic001G249233 Sobic001G341001--Sobic001G249233 Sobic008G103066 Sobic008G103066 Sobic001G341001--Sobic008G103066 Sobic006G062700 Sobic006G062700 Sobic001G341001--Sobic006G062700 Sobic009G001600 Sobic009G001600 Sobic001G341001--Sobic009G001600 Sobic010G207400 Sobic010G207400 Sobic009G132600--Sobic010G207400 Sobic007G091200 Sobic007G091200 Sobic009G132600--Sobic007G091200 Sobic009G253800 Sobic009G253800 Sobic009G132600--Sobic009G253800 Sobic001G278700 Sobic001G278700 Sobic009G132600--Sobic001G278700 Sobic010G273800 Sobic010G273800 Sobic009G132600--Sobic010G273800 Sobic009G132600--Sobic001G196700 Sobic009G033500 Sobic009G033500 Sobic009G132600--Sobic009G033500 Sobic003G207600 Sobic003G207600 Sobic009G132600--Sobic003G207600 Sobic009G007500 Sobic009G007500 Sobic009G132600--Sobic009G007500 Sobic008G160500 Sobic008G160500 Sobic008G109700--Sobic008G160500 Sobic003G111400 Sobic003G111400 Sobic008G109700--Sobic003G111400 Sobic006G139000 Sobic006G139000 Sobic008G109700--Sobic006G139000 Sobic008G109700--Sobic001G196700 Sobic009G055600 Sobic009G055600 Sobic008G109700--Sobic009G055600 Sobic008G109700--Sobic006G132400 Sobic008G109700--Sobic001G367700 Sobic003G442200 Sobic003G442200 Sobic008G109700--Sobic003G442200 Sobic003G004500 Sobic003G004500 Sobic008G109700--Sobic003G004500 Sobic008G001700 Sobic008G001700 Sobic004G176700--Sobic008G001700 Sobic009G086800 Sobic009G086800 Sobic004G176700--Sobic009G086800 Sobic004G171500 Sobic004G171500 Sobic004G176700--Sobic004G171500 Sobic001G362900 Sobic001G362900 Sobic004G176700--Sobic001G362900 Sobic004G116200 Sobic004G116200 Sobic004G176700--Sobic004G116200 Sobic002G088000 Sobic002G088000 Sobic004G176700--Sobic002G088000 Sobic007G147300 Sobic007G147300 Sobic004G176700--Sobic007G147300 Sobic004G085100 Sobic004G085100 Sobic004G176700--Sobic004G085100 Sobic008G071900 Sobic008G071900 Sobic004G176700--Sobic008G071900
Octagon: transcription factors


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