Gene annotation
Transcriptome id Sobic.001G341001.1
Synonym -
Functional annotation -
UniProt A0A1Z5S919
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G077600 LTPL169 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
2 Sobic.005G174900 - -
3 Sobic.007G025300 helix-loop-helix DNA-binding domain containing protein, expressed -
4 Sobic.009G245750 - -
5 Sobic.001G253501 - -
6 Sobic.001G249233 - -
7 Sobic.008G103066 - -
8 Sobic.006G062700 transferase family protein, putative, expressed -
9 Sobic.009G001600 "kafirin seed storage protein, similar to Beta-kafirin precursor"(PubMedID : 21853065)@PROLM24 - Prolamin precursor, expressed -
10 Sobic.003G247700 cold acclimation protein WCOR413, putative, expressed -
11 Sobic.005G140400 - -
12 Sobic.002G211700 storage protein(PubMedID : 16668596)@"kafirin seed storage protein, delta-kafirin precursor"(PubMedID : 21853065)@PROLM23 - Prolamin precursor, expressed -
13 Sobic.001G535900 aquaporin protein, putative, expressed K09873: aquaporin TIP
14 Sobic.007G070700 OsFBX265 - F-box domain containing protein, expressed -
15 Sobic.001G112250 - -
16 Sobic.007G049400 OsFBX381 - F-box domain containing protein, expressed -
17 Sobic.002G367600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@"BG2(Ortholog in rice:Xu et al., 2015)"(PubMedID : 31659863)@cytochrome P450, putative, expressed -
18 Sobic.002G028100 LTPL169 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
19 Sobic.010G200400 AP2 domain containing protein, expressed -
20 Sobic.002G089400 DEF8 - Defensin and Defensin-like DEFL family, expressed -


Gene co-expression network
sample Sobic001G341001 Sobic001G341001 Sobic002G077600 Sobic002G077600 Sobic001G341001--Sobic002G077600 Sobic005G174900 Sobic005G174900 Sobic001G341001--Sobic005G174900 Sobic007G025300 Sobic007G025300 Sobic001G341001--Sobic007G025300 Sobic009G245750 Sobic009G245750 Sobic001G341001--Sobic009G245750 Sobic001G253501 Sobic001G253501 Sobic001G341001--Sobic001G253501 Sobic001G249233 Sobic001G249233 Sobic001G341001--Sobic001G249233 Sobic008G103066 Sobic008G103066 Sobic001G341001--Sobic008G103066 Sobic006G062700 Sobic006G062700 Sobic001G341001--Sobic006G062700 Sobic009G001600 Sobic009G001600 Sobic001G341001--Sobic009G001600 Sobic007G070700 Sobic007G070700 Sobic002G077600--Sobic007G070700 Sobic007G083300 Sobic007G083300 Sobic002G077600--Sobic007G083300 Sobic002G077600--Sobic001G253501 Sobic002G077600--Sobic009G245750 Sobic003G247700 Sobic003G247700 Sobic002G077600--Sobic003G247700 Sobic001G112250 Sobic001G112250 Sobic002G077600--Sobic001G112250 Sobic002G077600--Sobic009G001600 Sobic002G211700 Sobic002G211700 Sobic002G077600--Sobic002G211700 Sobic007G049400 Sobic007G049400 Sobic002G077600--Sobic007G049400 Sobic005G174900--Sobic001G249233 Sobic005G174900--Sobic006G062700 Sobic005G140400 Sobic005G140400 Sobic005G174900--Sobic005G140400 Sobic005G174900--Sobic007G025300 Sobic005G174900--Sobic008G103066 Sobic010G148600 Sobic010G148600 Sobic005G174900--Sobic010G148600 Sobic005G174900--Sobic001G253501 Sobic005G174900--Sobic009G245750 Sobic005G174900--Sobic007G070700 Sobic007G025300--Sobic008G103066 Sobic002G089400 Sobic002G089400 Sobic007G025300--Sobic002G089400 Sobic010G200400 Sobic010G200400 Sobic007G025300--Sobic010G200400 Sobic007G025300--Sobic006G062700 Sobic007G025300--Sobic005G174900 Sobic007G025300--Sobic009G001600 Sobic002G367600 Sobic002G367600 Sobic007G025300--Sobic002G367600 Sobic001G535900 Sobic001G535900 Sobic007G025300--Sobic001G535900 Sobic007G205100 Sobic007G205100 Sobic007G025300--Sobic007G205100 Sobic009G245750--Sobic001G253501 Sobic009G245750--Sobic003G247700 Sobic009G245750--Sobic009G001600 Sobic009G245750--Sobic002G077600 Sobic009G245750--Sobic007G070700 Sobic009G245750--Sobic001G112250 Sobic009G245750--Sobic002G211700 Sobic009G245750--Sobic008G103066 Sobic009G245750--Sobic007G049400 Sobic001G253501--Sobic009G245750 Sobic001G253501--Sobic003G247700 Sobic001G253501--Sobic009G001600 Sobic001G253501--Sobic002G077600 Sobic001G253501--Sobic007G070700 Sobic001G253501--Sobic001G112250 Sobic001G253501--Sobic002G211700 Sobic001G253501--Sobic008G103066 Sobic001G253501--Sobic007G049400 Sobic001G249233--Sobic005G174900 Sobic001G249233--Sobic006G062700 Sobic001G249233--Sobic010G148600 Sobic001G249233--Sobic005G140400 Sobic010G109700 Sobic010G109700 Sobic001G249233--Sobic010G109700 Sobic001G249233--Sobic007G025300 Sobic003G024700 Sobic003G024700 Sobic001G249233--Sobic003G024700 Sobic005G056100 Sobic005G056100 Sobic001G249233--Sobic005G056100 Sobic001G249233--Sobic008G103066 Sobic008G103066--Sobic001G112250 Sobic008G103066--Sobic009G001600 Sobic008G103066--Sobic007G025300 Sobic008G103066--Sobic003G247700 Sobic008G103066--Sobic009G245750 Sobic008G103066--Sobic001G253501 Sobic008G103066--Sobic001G535900 Sobic008G103066--Sobic002G211700 Sobic008G103066--Sobic006G062700 Sobic006G062700--Sobic005G174900 Sobic006G062700--Sobic001G249233 Sobic006G062700--Sobic008G103066 Sobic006G062700--Sobic007G025300 Sobic006G062700--Sobic005G140400 Sobic006G062700--Sobic010G148600 Sobic006G062700--Sobic001G112250 Sobic006G062700--Sobic007G070700 Sobic006G062700--Sobic010G109700 Sobic009G001600--Sobic002G211700 Sobic009G001600--Sobic001G535900 Sobic009G001600--Sobic003G247700 Sobic009G001600--Sobic009G245750 Sobic009G001600--Sobic001G253501 Sobic009G001600--Sobic002G367600 Sobic009G001600--Sobic008G103066 Sobic009G001600--Sobic002G077600 Sobic009G001600--Sobic007G070700
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.