Gene annotation
Transcriptome id Sobic.004G317300.1,Sobic.004G317300.2
Synonym XI-15, XI-I, ATXI-I, Sb04g034830
Functional annotation "O1(Ortholog in maize:Wang et al., 2012)" (PubMedID : 31659891)
XI-I, putative, expressed
UniProt A0A1Z5RQ64 , C5XTK8
Pfam PF00612 PF01843 PF00063
Panther DB PTHR13140 PTHR13140:SF304
NCBI CDD -
KEGG Orthology K10357; myosin V
Gene Ontology GO:0005515; protein binding GO:0016459myosin complex GO:0005524ATP binding GO:0003774motor activity


Orthologs (automatic annotation)
TAIR AT4G33200 : myosin, putative
RAP-DB (Rice) LOC_Os03g48140.1,LOC_Os10g19860.1 : XI-I, putative, expressed,myosin, putative, expressed
MaizeGDB (Corn) Zm00025a052647 , Zm00025a033034 , Zm00025a023022
Brachypodium KQK01633 , KQK01634
Barley HORVU6Hr1G081340.19 , HORVU6Hr1G081340.12 , HORVU6Hr1G081340.13 , HORVU6Hr1G081340.10 , HORVU6Hr1G081340.11 , HORVU6Hr1G081340.16 , HORVU6Hr1G081340.17 , HORVU6Hr1G081340.14 , HORVU6Hr1G081340.15 , HORVU6Hr1G081340.21 , HORVU6Hr1G081340.20 , HORVU6Hr1G081340.1 , HORVU6Hr1G081340.2 , HORVU6Hr1G081340.3 , HORVU6Hr1G081340.4 , HORVU6Hr1G081340.5 , HORVU6Hr1G081340.6 , HORVU6Hr1G081340.7 , HORVU6Hr1G081340.8 , HORVU6Hr1G081340.9
Wheat TraesCS6B02G367000 , TraesCS6A02G336500 , TraesCS6D02G316500
Populus PNT33005 , PNT33006 , PNT33007 , PNT33008 , PNT33009


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G100700 mRNA-capping enzyme, putative, expressed -
2 Sobic.002G029100 GYF domain containing protein, putative, expressed -
3 Sobic.003G214600 transcriptional corepressor LEUNIG, putative, expressed -
4 Sobic.006G019300 F-box-like/WD repeat-containing protein TBL1XR1-A, putative, expressed K04508: transducin (beta)-like 1
5 Sobic.003G388100 expressed protein -
6 Sobic.001G277900 expressed protein -
7 Sobic.010G089400 TLD family protein, putative, expressed -
8 Sobic.006G169800 chaperone protein dnaJ, putative, expressed K09503: DnaJ homolog subfamily A member 2
9 Sobic.003G360400 ulp1 protease family protein, putative, expressed K08596: sentrin-specific protease 7
10 Sobic.009G255600 cleavage and polyadenylation specificity factor, putative, expressed K10610: DNA damage-binding protein 1
11 Sobic.004G311400 PHD-finger domain containing protein, putative, expressed -
12 Sobic.003G338000 non-green plastid inner envelope membrane protein, putative, expressed -
13 Sobic.001G430400 Ser/Thr protein phosphatase family protein, putative, expressed -
14 Sobic.007G018400 expressed protein -
15 Sobic.007G000200 expressed protein -
16 Sobic.008G001200 RNA recognition motif containing protein, putative, expressed -
17 Sobic.006G032300 HECT-domain domain containing protein, expressed K10590: E3 ubiquitin-protein ligase TRIP12
18 Sobic.006G173800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@copper-transporting ATPase 3, putative, expressed K17686: copA, ctpA, P-type Cu+ transporter
19 Sobic.008G144900 DUF221 domain containing protein, expressed -
20 Sobic.002G308700 expressed protein K11643: CHD4, chromodomain-helicase-DNA-binding protein 4


Gene co-expression network
sample Sobic004G317300 Sobic004G317300 Sobic005G100700 Sobic005G100700 Sobic004G317300--Sobic005G100700 Sobic002G029100 Sobic002G029100 Sobic004G317300--Sobic002G029100 Sobic003G214600 Sobic003G214600 Sobic004G317300--Sobic003G214600 Sobic006G019300 Sobic006G019300 Sobic004G317300--Sobic006G019300 Sobic003G388100 Sobic003G388100 Sobic004G317300--Sobic003G388100 Sobic001G277900 Sobic001G277900 Sobic004G317300--Sobic001G277900 Sobic010G089400 Sobic010G089400 Sobic004G317300--Sobic010G089400 Sobic006G169800 Sobic006G169800 Sobic004G317300--Sobic006G169800 Sobic003G360400 Sobic003G360400 Sobic004G317300--Sobic003G360400 Sobic005G100700--Sobic003G360400 Sobic002G344000 Sobic002G344000 Sobic005G100700--Sobic002G344000 Sobic007G159900 Sobic007G159900 Sobic005G100700--Sobic007G159900 Sobic003G389200 Sobic003G389200 Sobic005G100700--Sobic003G389200 Sobic008G113100 Sobic008G113100 Sobic005G100700--Sobic008G113100 Sobic007G146100 Sobic007G146100 Sobic005G100700--Sobic007G146100 Sobic006G096900 Sobic006G096900 Sobic005G100700--Sobic006G096900 Sobic001G456300 Sobic001G456300 Sobic005G100700--Sobic001G456300 Sobic010G112100 Sobic010G112100 Sobic005G100700--Sobic010G112100 Sobic004G311400 Sobic004G311400 Sobic002G029100--Sobic004G311400 Sobic002G029100--Sobic003G214600 Sobic005G200800 Sobic005G200800 Sobic002G029100--Sobic005G200800 Sobic009G255600 Sobic009G255600 Sobic002G029100--Sobic009G255600 Sobic007G183300 Sobic007G183300 Sobic002G029100--Sobic007G183300 Sobic002G245000 Sobic002G245000 Sobic002G029100--Sobic002G245000 Sobic010G186600 Sobic010G186600 Sobic002G029100--Sobic010G186600 Sobic002G164200 Sobic002G164200 Sobic002G029100--Sobic002G164200 Sobic008G002300 Sobic008G002300 Sobic002G029100--Sobic008G002300 Sobic003G214600--Sobic005G200800 Sobic003G214600--Sobic002G029100 Sobic006G088200 Sobic006G088200 Sobic003G214600--Sobic006G088200 Sobic003G408600 Sobic003G408600 Sobic003G214600--Sobic003G408600 Sobic003G214600--Sobic009G255600 Sobic005G008800 Sobic005G008800 Sobic003G214600--Sobic005G008800 Sobic003G214600--Sobic007G183300 Sobic007G163100 Sobic007G163100 Sobic003G214600--Sobic007G163100 Sobic003G214600--Sobic003G360400 Sobic006G019300--Sobic005G100700 Sobic002G374300 Sobic002G374300 Sobic006G019300--Sobic002G374300 Sobic006G056700 Sobic006G056700 Sobic006G019300--Sobic006G056700 Sobic001G501800 Sobic001G501800 Sobic006G019300--Sobic001G501800 Sobic004G243600 Sobic004G243600 Sobic006G019300--Sobic004G243600 Sobic006G019300--Sobic001G456300 Sobic006G019300--Sobic004G317300 Sobic006G019300--Sobic005G200800 Sobic006G019300--Sobic003G360400 Sobic008G001200 Sobic008G001200 Sobic003G388100--Sobic008G001200 Sobic001G454500 Sobic001G454500 Sobic003G388100--Sobic001G454500 Sobic010G206900 Sobic010G206900 Sobic003G388100--Sobic010G206900 Sobic001G365900 Sobic001G365900 Sobic003G388100--Sobic001G365900 Sobic010G123600 Sobic010G123600 Sobic003G388100--Sobic010G123600 Sobic003G155100 Sobic003G155100 Sobic003G388100--Sobic003G155100 Sobic009G256300 Sobic009G256300 Sobic003G388100--Sobic009G256300 Sobic003G388100--Sobic003G389200 Sobic001G230000 Sobic001G230000 Sobic003G388100--Sobic001G230000 Sobic002G146300 Sobic002G146300 Sobic001G277900--Sobic002G146300 Sobic001G277900--Sobic007G163100 Sobic001G289800 Sobic001G289800 Sobic001G277900--Sobic001G289800 Sobic003G195000 Sobic003G195000 Sobic001G277900--Sobic003G195000 Sobic001G277900--Sobic008G001200 Sobic003G205200 Sobic003G205200 Sobic001G277900--Sobic003G205200 Sobic001G370900 Sobic001G370900 Sobic001G277900--Sobic001G370900 Sobic002G275700 Sobic002G275700 Sobic001G277900--Sobic002G275700 Sobic001G542400 Sobic001G542400 Sobic001G277900--Sobic001G542400 Sobic010G089400--Sobic005G100700 Sobic010G021500 Sobic010G021500 Sobic010G089400--Sobic010G021500 Sobic010G089400--Sobic006G096900 Sobic002G211800 Sobic002G211800 Sobic010G089400--Sobic002G211800 Sobic010G086600 Sobic010G086600 Sobic010G089400--Sobic010G086600 Sobic010G226000 Sobic010G226000 Sobic010G089400--Sobic010G226000 Sobic003G362600 Sobic003G362600 Sobic010G089400--Sobic003G362600 Sobic010G089400--Sobic004G311400 Sobic010G089400--Sobic007G159900 Sobic006G169800--Sobic001G230000 Sobic001G275300 Sobic001G275300 Sobic006G169800--Sobic001G275300 Sobic006G169800--Sobic006G088200 Sobic004G244900 Sobic004G244900 Sobic006G169800--Sobic004G244900 Sobic006G169800--Sobic003G388100 Sobic008G044100 Sobic008G044100 Sobic006G169800--Sobic008G044100 Sobic007G009700 Sobic007G009700 Sobic006G169800--Sobic007G009700 Sobic002G325300 Sobic002G325300 Sobic006G169800--Sobic002G325300 Sobic007G223000 Sobic007G223000 Sobic006G169800--Sobic007G223000 Sobic003G360400--Sobic010G112100 Sobic002G154000 Sobic002G154000 Sobic003G360400--Sobic002G154000 Sobic001G354600 Sobic001G354600 Sobic003G360400--Sobic001G354600 Sobic001G433800 Sobic001G433800 Sobic003G360400--Sobic001G433800 Sobic003G360400--Sobic003G389200 Sobic009G044800 Sobic009G044800 Sobic003G360400--Sobic009G044800 Sobic005G112300 Sobic005G112300 Sobic003G360400--Sobic005G112300 Sobic007G063000 Sobic007G063000 Sobic003G360400--Sobic007G063000 Sobic003G360400--Sobic009G256300
Octagon: transcription factors


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