Gene annotation
Transcriptome id Sobic.001G277900.2,Sobic.001G277900.1
Synonym Sb01g027390
Functional annotation expressed protein
UniProt H0I4F8 , C5WPZ5
Pfam -
Panther DB PTHR16897 PTHR16897:SF3
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G58050 : -
RAP-DB (Rice) LOC_Os10g01610.1 : expressed protein
MaizeGDB (Corn) Zm00025a052963 , Zm00025a001451 , Zm00025a003637 , Zm00025a017999
Brachypodium KQJ96180
Barley -
Wheat -
Populus PNS98110 , PNS98111 , PNS98109


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G146300 cig3, putative, expressed K14409: SMG7, protein SMG7
2 Sobic.007G163100 expressed protein K14972: PAXIP1, PAX-interacting protein 1
3 Sobic.001G289800 BAH domain containing protein, putative, expressed -
4 Sobic.003G195000 OsFtsH5 FtsH protease, homologue of AtFtsH4, expressed K08955: ATP-dependent metalloprotease
5 Sobic.008G001200 RNA recognition motif containing protein, putative, expressed -
6 Sobic.003G205200 expressed protein K19027: zinc finger FYVE domain-containing protein 26
7 Sobic.001G370900 expressed protein K11665: INO80, DNA helicase INO80
8 Sobic.002G275700 pantothenate kinase, putative, expressed K09680: type II pantothenate kinase
9 Sobic.001G542400 CCR4-Not complex component, Not1domain containing protein, expressed K12604: CNOT1, CCR4-NOT transcription complex subunit 1
10 Sobic.001G194200 diacylglycerol kinase, putative, expressed -
11 Sobic.003G388100 expressed protein -
12 Sobic.005G008800 WD domain and HEAT domain containing protein, putative, expressed K07204: regulatory associated protein of mTOR
13 Sobic.004G001500 HECT-domain domain containing protein, expressed K10590: E3 ubiquitin-protein ligase TRIP12
14 Sobic.007G103100 SWP, putative, expressed K15156: MED14, mediator of RNA polymerase II transcription subunit 14
15 Sobic.009G256400 ATP binding protein, putative, expressed K15192: BTAF1, TATA-binding protein-associated factor
16 Sobic.002G316600 expressed protein -
17 Sobic.001G400500 calpain, putative, expressed -
18 Sobic.005G001000 RNA recognition motif containing protein, putative, expressed K10643: CNOT4, NOT4, CCR4-NOT transcription complex subunit 4
19 Sobic.001G430400 Ser/Thr protein phosphatase family protein, putative, expressed -
20 Sobic.002G335600 eukaryotic translation initiation factor 4G, putative, expressed K03260: translation initiation factor 4G


Gene co-expression network
sample Sobic001G277900 Sobic001G277900 Sobic002G146300 Sobic002G146300 Sobic001G277900--Sobic002G146300 Sobic007G163100 Sobic007G163100 Sobic001G277900--Sobic007G163100 Sobic001G289800 Sobic001G289800 Sobic001G277900--Sobic001G289800 Sobic003G195000 Sobic003G195000 Sobic001G277900--Sobic003G195000 Sobic008G001200 Sobic008G001200 Sobic001G277900--Sobic008G001200 Sobic003G205200 Sobic003G205200 Sobic001G277900--Sobic003G205200 Sobic001G370900 Sobic001G370900 Sobic001G277900--Sobic001G370900 Sobic002G275700 Sobic002G275700 Sobic001G277900--Sobic002G275700 Sobic001G542400 Sobic001G542400 Sobic001G277900--Sobic001G542400 Sobic002G146300--Sobic003G205200 Sobic002G146300--Sobic001G370900 Sobic010G139600 Sobic010G139600 Sobic002G146300--Sobic010G139600 Sobic005G001000 Sobic005G001000 Sobic002G146300--Sobic005G001000 Sobic004G001500 Sobic004G001500 Sobic002G146300--Sobic004G001500 Sobic002G146300--Sobic008G001200 Sobic001G194200 Sobic001G194200 Sobic002G146300--Sobic001G194200 Sobic007G075400 Sobic007G075400 Sobic002G146300--Sobic007G075400 Sobic009G256400 Sobic009G256400 Sobic002G146300--Sobic009G256400 Sobic003G408600 Sobic003G408600 Sobic007G163100--Sobic003G408600 Sobic008G118200 Sobic008G118200 Sobic007G163100--Sobic008G118200 Sobic002G045600 Sobic002G045600 Sobic007G163100--Sobic002G045600 Sobic001G117200 Sobic001G117200 Sobic007G163100--Sobic001G117200 Sobic003G072200 Sobic003G072200 Sobic007G163100--Sobic003G072200 Sobic003G422500 Sobic003G422500 Sobic007G163100--Sobic003G422500 Sobic001G540400 Sobic001G540400 Sobic007G163100--Sobic001G540400 Sobic007G163100--Sobic001G289800 Sobic004G113400 Sobic004G113400 Sobic007G163100--Sobic004G113400 Sobic001G289600 Sobic001G289600 Sobic001G289800--Sobic001G289600 Sobic001G289800--Sobic003G422500 Sobic001G289800--Sobic001G194200 Sobic004G291900 Sobic004G291900 Sobic001G289800--Sobic004G291900 Sobic004G034900 Sobic004G034900 Sobic001G289800--Sobic004G034900 Sobic001G002000 Sobic001G002000 Sobic001G289800--Sobic001G002000 Sobic010G010700 Sobic010G010700 Sobic001G289800--Sobic010G010700 Sobic007G062800 Sobic007G062800 Sobic001G289800--Sobic007G062800 Sobic001G289800--Sobic005G001000 Sobic003G195000--Sobic001G289800 Sobic003G195000--Sobic001G194200 Sobic009G053900 Sobic009G053900 Sobic003G195000--Sobic009G053900 Sobic003G195000--Sobic002G146300 Sobic003G195000--Sobic002G275700 Sobic003G195000--Sobic005G001000 Sobic002G142900 Sobic002G142900 Sobic003G195000--Sobic002G142900 Sobic003G195000--Sobic001G289600 Sobic001G192000 Sobic001G192000 Sobic003G195000--Sobic001G192000 Sobic003G155100 Sobic003G155100 Sobic008G001200--Sobic003G155100 Sobic010G206900 Sobic010G206900 Sobic008G001200--Sobic010G206900 Sobic008G001200--Sobic009G256400 Sobic008G001200--Sobic003G205200 Sobic008G001200--Sobic010G010700 Sobic008G001200--Sobic001G194200 Sobic008G001200--Sobic005G001000 Sobic004G276400 Sobic004G276400 Sobic008G001200--Sobic004G276400 Sobic004G174200 Sobic004G174200 Sobic008G001200--Sobic004G174200 Sobic003G205200--Sobic002G146300 Sobic003G205200--Sobic005G001000 Sobic003G205200--Sobic008G001200 Sobic003G205200--Sobic001G370900 Sobic003G186000 Sobic003G186000 Sobic003G205200--Sobic003G186000 Sobic003G205200--Sobic010G139600 Sobic003G205200--Sobic004G276400 Sobic003G205200--Sobic001G194200 Sobic008G098900 Sobic008G098900 Sobic003G205200--Sobic008G098900 Sobic001G370900--Sobic008G098900 Sobic001G370900--Sobic005G001000 Sobic001G370900--Sobic009G256400 Sobic001G370900--Sobic002G146300 Sobic001G370900--Sobic003G205200 Sobic001G370900--Sobic001G194200 Sobic001G370900--Sobic004G276400 Sobic001G370900--Sobic008G001200 Sobic001G457800 Sobic001G457800 Sobic001G370900--Sobic001G457800 Sobic002G275700--Sobic001G192000 Sobic002G275700--Sobic001G194200 Sobic007G103100 Sobic007G103100 Sobic002G275700--Sobic007G103100 Sobic006G041600 Sobic006G041600 Sobic002G275700--Sobic006G041600 Sobic009G255700 Sobic009G255700 Sobic002G275700--Sobic009G255700 Sobic002G275700--Sobic003G195000 Sobic002G275700--Sobic001G289800 Sobic001G527800 Sobic001G527800 Sobic002G275700--Sobic001G527800 Sobic003G196300 Sobic003G196300 Sobic002G275700--Sobic003G196300 Sobic001G299700 Sobic001G299700 Sobic001G542400--Sobic001G299700 Sobic009G109200 Sobic009G109200 Sobic001G542400--Sobic009G109200 Sobic001G400500 Sobic001G400500 Sobic001G542400--Sobic001G400500 Sobic009G256300 Sobic009G256300 Sobic001G542400--Sobic009G256300 Sobic010G112100 Sobic010G112100 Sobic001G542400--Sobic010G112100 Sobic001G542400--Sobic004G276400 Sobic010G105200 Sobic010G105200 Sobic001G542400--Sobic010G105200 Sobic005G008800 Sobic005G008800 Sobic001G542400--Sobic005G008800 Sobic001G542400--Sobic008G001200
Octagon: transcription factors


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