Gene annotation
Transcriptome id Sobic.003G380600.1,Sobic.003G380600.2
Synonym Sb03g042030
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
mitochondrion protein, putative, expressed
UniProt C5XEM9 , A0A1W0W0W1
Pfam PF12697
Panther DB PTHR10992 PTHR10992:SF833
NCBI CDD KOG2382; Predicted alpha/beta hydrolase
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G10030 : alpha/beta-Hydrolases superfamily protein
RAP-DB (Rice) LOC_Os01g66240.1 : mitochondrion protein, putative, expressed
MaizeGDB (Corn) Zm00025a026523
Brachypodium KQK10944 , KQK10941 , KQK10943 , KQK10942
Barley HORVU3Hr1G090760.1 , HORVU3Hr1G090760.3 , HORVU3Hr1G090760.2 , HORVU3Hr1G090760.5 , HORVU3Hr1G090760.4 , HORVU3Hr1G090760.7 , HORVU3Hr1G090760.6 , HORVU3Hr1G090760.9 , HORVU3Hr1G090760.8 , HORVU3Hr1G090760.15 , HORVU3Hr1G090760.14 , HORVU3Hr1G090760.11 , HORVU3Hr1G090760.10 , HORVU3Hr1G090760.12 , HORVU3Hr1G090760.13
Wheat TraesCS3A02G404500 , TraesCS3D02G399700 , TraesCS3D02G399700 , TraesCS3B02G438000
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G033800 basic helix-loop-helix DND-binding domain containing protein, expressed -
2 Sobic.004G203400 repressor of RNA polymerase III transcription MAF1, putative, expressed -
3 Sobic.004G343500 OsCttP2 - Putative C-terminal processing peptidase homologue, expressed -
4 Sobic.009G054900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@relA-SpoT like protein RSH4, putative, expressed -
5 Sobic.001G239500 starch synthase, putative, expressed K00703: starch synthase
6 Sobic.001G020100 expressed protein -
7 Sobic.001G386300 zinc finger, C3HC4 type domain containing protein, expressed -
8 Sobic.009G017800 glutathione S-transferase, N-terminal domain containing protein, expressed -
9 Sobic.009G140800 DUF647 domain containing protein, putative, expressed -
10 Sobic.003G316700 katanin p80 WD40 repeat-containing subunit B1 homolog 1, putative, expressed K18643: katanin p80 WD40 repeat-containing subunit B1
11 Sobic.001G514800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@serine acetyltransferase protein, putative, expressed K00640: serine O-acetyltransferase
12 Sobic.001G292700 crcB-like protein, expressed -
13 Sobic.001G207700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
14 Sobic.001G406100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@mitochondrial carrier protein, putative, expressed K15100: SLC25A1, solute carrier family 25 (mitochondrial citrate transporter), member 1
15 Sobic.004G353700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
16 Sobic.002G294500 OsRCI2-11 - Hydrophobic protein OSR8, expressed -
17 Sobic.002G273300 B-box (BBX) protein(PubMedID : 30626335)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@B-box zinc finger family protein, putative, expressed -
18 Sobic.001G043000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@short-chain dehydrogenase/reductase, putative, expressed K15095: (+)-neomenthol dehydrogenase
19 Sobic.001G178250 - -
20 Sobic.003G243600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ubiquitin-conjugating enzyme, putative, expressed K06689: UBE2D, UBC4, ubiquitin-conjugating enzyme E2 D


Gene co-expression network
sample Sobic003G380600 Sobic003G380600 Sobic007G033800 Sobic007G033800 Sobic003G380600--Sobic007G033800 Sobic004G203400 Sobic004G203400 Sobic003G380600--Sobic004G203400 Sobic004G343500 Sobic004G343500 Sobic003G380600--Sobic004G343500 Sobic009G054900 Sobic009G054900 Sobic003G380600--Sobic009G054900 Sobic001G239500 Sobic001G239500 Sobic003G380600--Sobic001G239500 Sobic001G020100 Sobic001G020100 Sobic003G380600--Sobic001G020100 Sobic001G386300 Sobic001G386300 Sobic003G380600--Sobic001G386300 Sobic009G017800 Sobic009G017800 Sobic003G380600--Sobic009G017800 Sobic009G140800 Sobic009G140800 Sobic003G380600--Sobic009G140800 Sobic005G033200 Sobic005G033200 Sobic007G033800--Sobic005G033200 Sobic001G339500 Sobic001G339500 Sobic007G033800--Sobic001G339500 Sobic010G023700 Sobic010G023700 Sobic007G033800--Sobic010G023700 Sobic001G031100 Sobic001G031100 Sobic007G033800--Sobic001G031100 Sobic006G173600 Sobic006G173600 Sobic007G033800--Sobic006G173600 Sobic002G339600 Sobic002G339600 Sobic007G033800--Sobic002G339600 Sobic001G071800 Sobic001G071800 Sobic007G033800--Sobic001G071800 Sobic002G111200 Sobic002G111200 Sobic007G033800--Sobic002G111200 Sobic002G421900 Sobic002G421900 Sobic007G033800--Sobic002G421900 Sobic009G229200 Sobic009G229200 Sobic004G203400--Sobic009G229200 Sobic010G042100 Sobic010G042100 Sobic004G203400--Sobic010G042100 Sobic001G388200 Sobic001G388200 Sobic004G203400--Sobic001G388200 Sobic002G134001 Sobic002G134001 Sobic004G203400--Sobic002G134001 Sobic009G165800 Sobic009G165800 Sobic004G203400--Sobic009G165800 Sobic003G117900 Sobic003G117900 Sobic004G203400--Sobic003G117900 Sobic001G314500 Sobic001G314500 Sobic004G203400--Sobic001G314500 Sobic010G083700 Sobic010G083700 Sobic004G203400--Sobic010G083700 Sobic006G232200 Sobic006G232200 Sobic004G203400--Sobic006G232200 Sobic002G273300 Sobic002G273300 Sobic004G343500--Sobic002G273300 Sobic004G343500--Sobic009G054900 Sobic004G343500--Sobic001G239500 Sobic009G249600 Sobic009G249600 Sobic004G343500--Sobic009G249600 Sobic001G134100 Sobic001G134100 Sobic004G343500--Sobic001G134100 Sobic004G351700 Sobic004G351700 Sobic004G343500--Sobic004G351700 Sobic007G047400 Sobic007G047400 Sobic004G343500--Sobic007G047400 Sobic006G244000 Sobic006G244000 Sobic004G343500--Sobic006G244000 Sobic007G140800 Sobic007G140800 Sobic004G343500--Sobic007G140800 Sobic001G329400 Sobic001G329400 Sobic009G054900--Sobic001G329400 Sobic010G251700 Sobic010G251700 Sobic009G054900--Sobic010G251700 Sobic009G054900--Sobic004G343500 Sobic009G054900--Sobic007G140800 Sobic001G178250 Sobic001G178250 Sobic009G054900--Sobic001G178250 Sobic004G356400 Sobic004G356400 Sobic009G054900--Sobic004G356400 Sobic006G130300 Sobic006G130300 Sobic009G054900--Sobic006G130300 Sobic001G514800 Sobic001G514800 Sobic009G054900--Sobic001G514800 Sobic006G093800 Sobic006G093800 Sobic009G054900--Sobic006G093800 Sobic001G239500--Sobic004G343500 Sobic001G239500--Sobic002G273300 Sobic001G239500--Sobic001G514800 Sobic008G168300 Sobic008G168300 Sobic001G239500--Sobic008G168300 Sobic003G004200 Sobic003G004200 Sobic001G239500--Sobic003G004200 Sobic001G239500--Sobic009G054900 Sobic001G207700 Sobic001G207700 Sobic001G239500--Sobic001G207700 Sobic001G239500--Sobic009G249600 Sobic001G239500--Sobic007G047400 Sobic001G491000 Sobic001G491000 Sobic001G020100--Sobic001G491000 Sobic003G370000 Sobic003G370000 Sobic001G020100--Sobic003G370000 Sobic001G289500 Sobic001G289500 Sobic001G020100--Sobic001G289500 Sobic007G161500 Sobic007G161500 Sobic001G020100--Sobic007G161500 Sobic001G020100--Sobic006G130300 Sobic005G056400 Sobic005G056400 Sobic001G020100--Sobic005G056400 Sobic001G076900 Sobic001G076900 Sobic001G020100--Sobic001G076900 Sobic006G238200 Sobic006G238200 Sobic001G020100--Sobic006G238200 Sobic001G100000 Sobic001G100000 Sobic001G020100--Sobic001G100000 Sobic002G054300 Sobic002G054300 Sobic001G386300--Sobic002G054300 Sobic003G121300 Sobic003G121300 Sobic001G386300--Sobic003G121300 Sobic004G210800 Sobic004G210800 Sobic001G386300--Sobic004G210800 Sobic001G080700 Sobic001G080700 Sobic001G386300--Sobic001G080700 Sobic001G386300--Sobic001G031100 Sobic001G332500 Sobic001G332500 Sobic001G386300--Sobic001G332500 Sobic003G316700 Sobic003G316700 Sobic001G386300--Sobic003G316700 Sobic010G029900 Sobic010G029900 Sobic001G386300--Sobic010G029900 Sobic002G126500 Sobic002G126500 Sobic001G386300--Sobic002G126500 Sobic009G015700 Sobic009G015700 Sobic009G017800--Sobic009G015700 Sobic001G301800 Sobic001G301800 Sobic009G017800--Sobic001G301800 Sobic001G496300 Sobic001G496300 Sobic009G017800--Sobic001G496300 Sobic009G017800--Sobic001G020100 Sobic001G447600 Sobic001G447600 Sobic009G017800--Sobic001G447600 Sobic006G097200 Sobic006G097200 Sobic009G017800--Sobic006G097200 Sobic009G017800--Sobic003G380600 Sobic010G026925 Sobic010G026925 Sobic009G017800--Sobic010G026925 Sobic001G407600 Sobic001G407600 Sobic009G017800--Sobic001G407600 Sobic003G234200 Sobic003G234200 Sobic009G140800--Sobic003G234200 Sobic009G140800--Sobic001G329400 Sobic004G268000 Sobic004G268000 Sobic009G140800--Sobic004G268000 Sobic004G125700 Sobic004G125700 Sobic009G140800--Sobic004G125700 Sobic004G238600 Sobic004G238600 Sobic009G140800--Sobic004G238600 Sobic005G110502 Sobic005G110502 Sobic009G140800--Sobic005G110502 Sobic003G431900 Sobic003G431900 Sobic009G140800--Sobic003G431900 Sobic009G129300 Sobic009G129300 Sobic009G140800--Sobic009G129300 Sobic009G140800--Sobic007G161500
Octagon: transcription factors


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