Gene annotation
Transcriptome id Sobic.004G203400.1
Synonym Sb04g024970
Functional annotation repressor of RNA polymerase III transcription MAF1, putative, expressed
UniProt C5XX39
Pfam PF09174
Panther DB PTHR22504
NCBI CDD KOG3104; Mod5 protein sorting/negative effector of RNA Pol III synthesis
KEGG Orthology -
Gene Ontology GO:0016480; negative regulation of transcription by RNA polymerase III


Orthologs (automatic annotation)
TAIR AT5G13240 : transcription regulators
RAP-DB (Rice) LOC_Os04g56730.3 : repressor of RNA polymerase III transcription MAF1, putative, expressed
MaizeGDB (Corn) Zm00025a021296
Brachypodium KQK02613 , KQK02614 , KQK02615 , PNT69908 , KQK20418 , PNT76842 , PNT76841 , KQK20417 , KQK20419
Barley HORVU3Hr1G010030.10 , HORVU3Hr1G010030.9 , HORVU3Hr1G010030.1 , HORVU3Hr1G010030.3 , HORVU3Hr1G010030.2 , HORVU3Hr1G010030.5 , HORVU3Hr1G010030.4 , HORVU3Hr1G010030.7 , HORVU3Hr1G010030.6
Wheat TraesCS3A02G053700 , TraesCS3A02G053700 , TraesCS3A02G053700 , TraesCS3B02G064600 , TraesCS3B02G064600 , TraesCS3B02G064600
Populus -


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cDNA sequences
Sobic.004G203400


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G229200 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in root, expression induced by IAA and BR treatments"(PubMedID : 20499123)@OsIAA19 - Auxin-responsive Aux/IAA gene family member, expressed K14484: auxin-responsive protein IAA
2 Sobic.010G042100 transcription elongation factor 1, putative, expressed -
3 Sobic.001G388200 ELMO/CED-12 family protein, putative, expressed -
4 Sobic.002G134001 - K14490: histidine-containing phosphotransfer peotein
5 Sobic.009G165800 G10 protein, putative, expressed K12873: BUD31, bud site selection protein 31
6 Sobic.003G117900 protein kinase, putative, expressed -
7 Sobic.001G314500 ubiquitin-conjugating enzyme, putative, expressed K10577: UBE2I, ubiquitin-conjugating enzyme E2 I
8 Sobic.010G083700 formin-binding protein-related, putative, expressed K13220: WBP4, WW domain-binding protein 4
9 Sobic.006G232200 SNARE domain containing protein, putative, expressed K08501: syntaxin 8
K08503: syntaxin of plants SYP5
10 Sobic.001G054200 green ripe-like, putative, expressed -
11 Sobic.002G194100 annexin, putative, expressed K17095: annexin A7/11
12 Sobic.001G031100 dolichyl-phosphate beta-glycosyltransferase, putative, expressed K00721: dolichol-phosphate mannosyltransferase
13 Sobic.003G316700 katanin p80 WD40 repeat-containing subunit B1 homolog 1, putative, expressed K18643: katanin p80 WD40 repeat-containing subunit B1
14 Sobic.001G007200 HSF-type DNA-binding domain containing protein, expressed K09419: heat shock transcription factor, other eukaryote
15 Sobic.004G141700 expressed protein -
16 Sobic.003G015900 CWC15 homolog A, putative, expressed K12863: protein CWC15
17 Sobic.004G226800 expressed protein -
18 Sobic.002G291200 UDP-glucose Pyrophosphorylase(PubMedID : 26616172)@UTP--glucose-1-phosphate uridylyltransferase, putative, expressed K00963: UGP2, galU, UTP--glucose-1-phosphate uridylyltransferase
19 Sobic.001G386300 zinc finger, C3HC4 type domain containing protein, expressed -
20 Sobic.007G033800 basic helix-loop-helix DND-binding domain containing protein, expressed -


Gene co-expression network
sample Sobic004G203400 Sobic004G203400 Sobic009G229200 Sobic009G229200 Sobic004G203400--Sobic009G229200 Sobic010G042100 Sobic010G042100 Sobic004G203400--Sobic010G042100 Sobic001G388200 Sobic001G388200 Sobic004G203400--Sobic001G388200 Sobic002G134001 Sobic002G134001 Sobic004G203400--Sobic002G134001 Sobic009G165800 Sobic009G165800 Sobic004G203400--Sobic009G165800 Sobic003G117900 Sobic003G117900 Sobic004G203400--Sobic003G117900 Sobic001G314500 Sobic001G314500 Sobic004G203400--Sobic001G314500 Sobic010G083700 Sobic010G083700 Sobic004G203400--Sobic010G083700 Sobic006G232200 Sobic006G232200 Sobic004G203400--Sobic006G232200 Sobic009G229200--Sobic002G134001 Sobic009G229200--Sobic004G203400 Sobic003G264200 Sobic003G264200 Sobic009G229200--Sobic003G264200 Sobic009G229200--Sobic009G165800 Sobic001G391600 Sobic001G391600 Sobic009G229200--Sobic001G391600 Sobic009G005900 Sobic009G005900 Sobic009G229200--Sobic009G005900 Sobic004G130100 Sobic004G130100 Sobic009G229200--Sobic004G130100 Sobic003G010400 Sobic003G010400 Sobic009G229200--Sobic003G010400 Sobic009G174900 Sobic009G174900 Sobic009G229200--Sobic009G174900 Sobic002G045300 Sobic002G045300 Sobic010G042100--Sobic002G045300 Sobic001G433400 Sobic001G433400 Sobic010G042100--Sobic001G433400 Sobic010G042100--Sobic003G117900 Sobic009G135600 Sobic009G135600 Sobic010G042100--Sobic009G135600 Sobic002G385900 Sobic002G385900 Sobic010G042100--Sobic002G385900 Sobic003G367451 Sobic003G367451 Sobic010G042100--Sobic003G367451 Sobic003G253000 Sobic003G253000 Sobic010G042100--Sobic003G253000 Sobic004G020000 Sobic004G020000 Sobic010G042100--Sobic004G020000 Sobic001G461900 Sobic001G461900 Sobic010G042100--Sobic001G461900 Sobic003G349300 Sobic003G349300 Sobic001G388200--Sobic003G349300 Sobic001G388200--Sobic006G232200 Sobic001G388200--Sobic009G135600 Sobic001G388200--Sobic010G083700 Sobic002G281300 Sobic002G281300 Sobic001G388200--Sobic002G281300 Sobic001G054200 Sobic001G054200 Sobic001G388200--Sobic001G054200 Sobic010G000900 Sobic010G000900 Sobic001G388200--Sobic010G000900 Sobic001G388200--Sobic001G314500 Sobic003G261400 Sobic003G261400 Sobic001G388200--Sobic003G261400 Sobic002G134001--Sobic009G229200 Sobic002G134001--Sobic009G174900 Sobic003G337000 Sobic003G337000 Sobic002G134001--Sobic003G337000 Sobic006G212100 Sobic006G212100 Sobic002G134001--Sobic006G212100 Sobic004G079100 Sobic004G079100 Sobic002G134001--Sobic004G079100 Sobic002G134001--Sobic009G005900 Sobic002G134001--Sobic001G433400 Sobic001G007200 Sobic001G007200 Sobic002G134001--Sobic001G007200 Sobic002G400000 Sobic002G400000 Sobic002G134001--Sobic002G400000 Sobic001G080700 Sobic001G080700 Sobic009G165800--Sobic001G080700 Sobic001G047400 Sobic001G047400 Sobic009G165800--Sobic001G047400 Sobic006G101700 Sobic006G101700 Sobic009G165800--Sobic006G101700 Sobic002G110700 Sobic002G110700 Sobic009G165800--Sobic002G110700 Sobic003G015900 Sobic003G015900 Sobic009G165800--Sobic003G015900 Sobic009G165800--Sobic010G083700 Sobic010G251000 Sobic010G251000 Sobic009G165800--Sobic010G251000 Sobic004G121100 Sobic004G121100 Sobic009G165800--Sobic004G121100 Sobic009G165800--Sobic003G264200 Sobic003G117900--Sobic010G042100 Sobic003G370900 Sobic003G370900 Sobic003G117900--Sobic003G370900 Sobic001G106700 Sobic001G106700 Sobic003G117900--Sobic001G106700 Sobic001G329100 Sobic001G329100 Sobic003G117900--Sobic001G329100 Sobic003G117900--Sobic001G007200 Sobic004G167400 Sobic004G167400 Sobic003G117900--Sobic004G167400 Sobic004G067100 Sobic004G067100 Sobic003G117900--Sobic004G067100 Sobic003G117900--Sobic002G045300 Sobic010G253800 Sobic010G253800 Sobic003G117900--Sobic010G253800 Sobic001G314500--Sobic006G212100 Sobic009G198500 Sobic009G198500 Sobic001G314500--Sobic009G198500 Sobic007G168600 Sobic007G168600 Sobic001G314500--Sobic007G168600 Sobic001G314500--Sobic001G388200 Sobic001G314500--Sobic006G232200 Sobic001G314500--Sobic001G054200 Sobic009G004600 Sobic009G004600 Sobic001G314500--Sobic009G004600 Sobic010G205300 Sobic010G205300 Sobic001G314500--Sobic010G205300 Sobic003G217400 Sobic003G217400 Sobic001G314500--Sobic003G217400 Sobic006G263900 Sobic006G263900 Sobic010G083700--Sobic006G263900 Sobic010G168600 Sobic010G168600 Sobic010G083700--Sobic010G168600 Sobic010G083700--Sobic001G054200 Sobic010G083700--Sobic001G007200 Sobic009G246950 Sobic009G246950 Sobic010G083700--Sobic009G246950 Sobic004G293700 Sobic004G293700 Sobic010G083700--Sobic004G293700 Sobic010G083700--Sobic010G253800 Sobic002G256300 Sobic002G256300 Sobic010G083700--Sobic002G256300 Sobic003G007500 Sobic003G007500 Sobic010G083700--Sobic003G007500 Sobic003G124800 Sobic003G124800 Sobic006G232200--Sobic003G124800 Sobic007G045600 Sobic007G045600 Sobic006G232200--Sobic007G045600 Sobic001G143300 Sobic001G143300 Sobic006G232200--Sobic001G143300 Sobic006G232200--Sobic009G198500 Sobic006G232200--Sobic004G130100 Sobic003G323600 Sobic003G323600 Sobic006G232200--Sobic003G323600 Sobic006G232200--Sobic001G054200 Sobic008G161800 Sobic008G161800 Sobic006G232200--Sobic008G161800 Sobic006G232200--Sobic001G388200
Octagon: transcription factors


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