Gene annotation
Transcriptome id Sobic.001G338500.1,Sobic.001G338500.2
Synonym Sb01g032575, ACR4
Functional annotation ACT domain containing protein, expressed
UniProt A0A1B6QML7 , A0A1B6QMK4
Pfam PF13740 PF01842
Panther DB PTHR31096 PTHR31096:SF13
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016597; amino acid binding GO:0008152metabolic process


Orthologs (automatic annotation)
TAIR AT1G69040 : ACT domain repeat 4
RAP-DB (Rice) LOC_Os03g29980.2 : ACT domain containing protein, expressed
MaizeGDB (Corn) Zm00025a002871 , Zm00025a007198
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G276400 "Phytoene synthase, chloroplast precursor (Zm)"(PubMedID : 27208977)@"Phytoene synthase, chloroplast precursor (Zm)"(PubMedID : 27208977)@carotenoid biosynthesi(PubMedID : 18162592)@phytoene synthase, chloroplast precursor, putative, expressed K02291: 15-cis-phytoene synthase
2 Sobic.003G199800 expressed protein -
3 Sobic.010G109500 expressed protein -
4 Sobic.004G026700 down-regulated TF in developmental senescence(PubMedID : 27586543)@transcription factor, putative, expressed K09060: plant G-box-binding factor
5 Sobic.002G000500 isoflavone reductase, putative, expressed -
6 Sobic.004G035500 -(PubMedID : 26976818)@Involved in photorespiratory pathway(PubMedID : 12887583)@dicarboxylate transporter 3(PubMedID : 27016024)@citrate transporter, putative, expressed K03319: divalent anion:Na+ symporter, DASS family
7 Sobic.004G026300 heat shock protein 18.2(PubMedID : 26465154)@hsp20/alpha crystallin family protein, putative, expressed K13993: HSP20 family protein
8 Sobic.001G068400 - -
9 Sobic.006G147300 -(PubMedID : 26465154)@expressed protein -
10 Sobic.002G098800 peroxiredoxin, putative, expressed -
11 Sobic.006G008700 bifunctional 3-phosphoadenosine 5-phosphosulfate synthetase, putative, expressed K13811: 3'-phosphoadenosine 5'-phosphosulfate synthase
12 Sobic.002G040100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@- -
13 Sobic.002G180400 isochorismate synthase 1, chloroplast precursor, putative, expressed K02552: menaquinone-specific isochorismate synthase
14 Sobic.004G023200 Polyketide cyclase/dehydrase and lipid transport superfamily protein(PubMedID : 26465154)@membrane related protein CP5, putative, expressed -
15 Sobic.010G183100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@agenet domain containing protein, putative, expressed -
16 Sobic.008G021300 Unnamed(PubMedID : 24676859)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@FHA domain containing protein, putative, expressed -
17 Sobic.001G361700 expressed protein -
18 Sobic.003G209800 Chorophyll a/b binding protein 2(PubMedID : 26186930)@Protein chlorophyll a-b binding protein 2 (Os)(PubMedID : 27208977)@chlorophyll A-B binding protein, putative, expressed K08912: light-harvesting complex II chlorophyll a/b binding protein 1
19 Sobic.006G234100 shikimate/quinate 5-dehydrogenase, putative, expressed K02492: glutamyl-tRNA reductase
20 Sobic.004G249800 expressed protein -


Gene co-expression network
sample Sobic001G338500 Sobic001G338500 Sobic010G276400 Sobic010G276400 Sobic001G338500--Sobic010G276400 Sobic003G199800 Sobic003G199800 Sobic001G338500--Sobic003G199800 Sobic010G109500 Sobic010G109500 Sobic001G338500--Sobic010G109500 Sobic004G026700 Sobic004G026700 Sobic001G338500--Sobic004G026700 Sobic002G000500 Sobic002G000500 Sobic001G338500--Sobic002G000500 Sobic004G035500 Sobic004G035500 Sobic001G338500--Sobic004G035500 Sobic004G026300 Sobic004G026300 Sobic001G338500--Sobic004G026300 Sobic001G068400 Sobic001G068400 Sobic001G338500--Sobic001G068400 Sobic006G147300 Sobic006G147300 Sobic001G338500--Sobic006G147300 Sobic010G276400--Sobic010G109500 Sobic010G276400--Sobic003G199800 Sobic010G276400--Sobic002G000500 Sobic002G040100 Sobic002G040100 Sobic010G276400--Sobic002G040100 Sobic006G234100 Sobic006G234100 Sobic010G276400--Sobic006G234100 Sobic010G276400--Sobic001G068400 Sobic008G038300 Sobic008G038300 Sobic010G276400--Sobic008G038300 Sobic007G171600 Sobic007G171600 Sobic010G276400--Sobic007G171600 Sobic003G209800 Sobic003G209800 Sobic010G276400--Sobic003G209800 Sobic003G199800--Sobic002G040100 Sobic003G199800--Sobic010G276400 Sobic003G199800--Sobic002G000500 Sobic010G183100 Sobic010G183100 Sobic003G199800--Sobic010G183100 Sobic003G199800--Sobic004G035500 Sobic003G199800--Sobic008G038300 Sobic003G199800--Sobic010G109500 Sobic007G189700 Sobic007G189700 Sobic003G199800--Sobic007G189700 Sobic009G191300 Sobic009G191300 Sobic003G199800--Sobic009G191300 Sobic010G109500--Sobic006G234100 Sobic001G448400 Sobic001G448400 Sobic010G109500--Sobic001G448400 Sobic006G011100 Sobic006G011100 Sobic010G109500--Sobic006G011100 Sobic010G109500--Sobic003G209800 Sobic010G109500--Sobic010G276400 Sobic002G339200 Sobic002G339200 Sobic010G109500--Sobic002G339200 Sobic010G109500--Sobic002G000500 Sobic003G052500 Sobic003G052500 Sobic010G109500--Sobic003G052500 Sobic004G343300 Sobic004G343300 Sobic010G109500--Sobic004G343300 Sobic004G026700--Sobic002G000500 Sobic001G274600 Sobic001G274600 Sobic004G026700--Sobic001G274600 Sobic001G361700 Sobic001G361700 Sobic004G026700--Sobic001G361700 Sobic004G026700--Sobic002G040100 Sobic004G026700--Sobic006G011100 Sobic004G026700--Sobic003G199800 Sobic004G035601 Sobic004G035601 Sobic004G026700--Sobic004G035601 Sobic004G026700--Sobic003G209800 Sobic001G338700 Sobic001G338700 Sobic004G026700--Sobic001G338700 Sobic002G000500--Sobic002G040100 Sobic002G000500--Sobic006G011100 Sobic002G000500--Sobic010G109500 Sobic002G000500--Sobic010G276400 Sobic002G000500--Sobic003G199800 Sobic002G000500--Sobic008G038300 Sobic002G000500--Sobic007G171600 Sobic002G000500--Sobic003G209800 Sobic002G000500--Sobic001G274600 Sobic003G359100 Sobic003G359100 Sobic004G035500--Sobic003G359100 Sobic008G134800 Sobic008G134800 Sobic004G035500--Sobic008G134800 Sobic007G071500 Sobic007G071500 Sobic004G035500--Sobic007G071500 Sobic004G249800 Sobic004G249800 Sobic004G035500--Sobic004G249800 Sobic008G066100 Sobic008G066100 Sobic004G035500--Sobic008G066100 Sobic008G021300 Sobic008G021300 Sobic004G035500--Sobic008G021300 Sobic007G207800 Sobic007G207800 Sobic004G035500--Sobic007G207800 Sobic004G272100 Sobic004G272100 Sobic004G035500--Sobic004G272100 Sobic006G105900 Sobic006G105900 Sobic004G035500--Sobic006G105900 Sobic003G131000 Sobic003G131000 Sobic004G026300--Sobic003G131000 Sobic004G026300--Sobic010G276400 Sobic004G026300--Sobic003G199800 Sobic003G234400 Sobic003G234400 Sobic004G026300--Sobic003G234400 Sobic010G038500 Sobic010G038500 Sobic004G026300--Sobic010G038500 Sobic001G111700 Sobic001G111700 Sobic004G026300--Sobic001G111700 Sobic004G026300--Sobic001G068400 Sobic004G026300--Sobic002G040100 Sobic003G069100 Sobic003G069100 Sobic004G026300--Sobic003G069100 Sobic001G068400--Sobic002G040100 Sobic001G068400--Sobic010G038500 Sobic001G068400--Sobic010G183100 Sobic004G035700 Sobic004G035700 Sobic001G068400--Sobic004G035700 Sobic008G081200 Sobic008G081200 Sobic001G068400--Sobic008G081200 Sobic001G068400--Sobic010G276400 Sobic001G068400--Sobic002G000500 Sobic001G068400--Sobic003G199800 Sobic010G183032 Sobic010G183032 Sobic001G068400--Sobic010G183032 Sobic006G147300--Sobic007G207800 Sobic006G147300--Sobic008G066100 Sobic006G147300--Sobic003G359100 Sobic002G030500 Sobic002G030500 Sobic006G147300--Sobic002G030500 Sobic006G147300--Sobic004G035500 Sobic002G098800 Sobic002G098800 Sobic006G147300--Sobic002G098800 Sobic006G147300--Sobic003G199800 Sobic004G272600 Sobic004G272600 Sobic006G147300--Sobic004G272600 Sobic003G435800 Sobic003G435800 Sobic006G147300--Sobic003G435800
Octagon: transcription factors


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