Gene annotation
Transcriptome id Sobic.001G526600.1
Synonym Sb01g049010, SCE1A, ATSCE1, EMB1637, SCE1, AHUS5
Functional annotation ubiquitin-conjugating enzyme, putative, expressed
UniProt C5X0V8
Pfam PF00179
Panther DB PTHR24067 PTHR24067:SF153
NCBI CDD KOG0424; Ubiquitin-protein ligase
KEGG Orthology K10577; UBE2I, ubiquitin-conjugating enzyme E2 I
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G57870 : sumo conjugation enzyme 1
RAP-DB (Rice) LOC_Os03g03130.1 : ubiquitin-conjugating enzyme, putative, expressed
MaizeGDB (Corn) Zm00025a052246 , Zm00025a000312 , Zm00025a003147 , Zm00025a053502
Brachypodium KQK23919 , KQJ97591
Barley HORVU1Hr1G051610.1 , HORVU1Hr1G051610.3 , HORVU4Hr1G084760.8 , HORVU4Hr1G084760.3 , HORVU4Hr1G084760.2 , HORVU4Hr1G084760.1 , HORVU4Hr1G084760.7 , HORVU4Hr1G084760.6 , HORVU4Hr1G084760.5 , HORVU4Hr1G084760.4 , HORVU1Hr1G051610.2
Wheat TraesCS2B02G413400 , TraesCS4D02G341600 , TraesCS4D02G341600 , TraesCS2D02G393100 , TraesCS1D02G203200 , TraesCS2A02G395300 , TraesCS4B02G346600 , TraesCS4B02G346600 , TraesCS1B02G214400 , TraesCS1B02G214400 , TraesCS1A02G199500 , TraesCS5A02G515400
Populus -


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cDNA sequences
Sobic.001G526600


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G071000 SLT1 protein, putative, expressed -
2 Sobic.001G175600 acyl carrier protein, putative, expressed K03955: NADH dehydrogenase (ubiquinone) 1 alpha/beta subcomplex 1, acyl-carrier protein
3 Sobic.010G184100 mitochondrial carrier protein, putative, expressed -
4 Sobic.002G204000 26S proteasome non-ATPase regulatory subunit 9, putative, expressed K06693: PSMD9, 26S proteasome regulatory subunit N4
5 Sobic.001G266400 armadillo/beta-catenin repeat family protein, putative, expressed -
6 Sobic.009G015700 actin-depolymerizing factor, putative, expressed K05765: cofilin
7 Sobic.004G001400 SKP1-like protein 1B, putative, expressed K03094: SKP1, S-phase kinase-associated protein 1
8 Sobic.009G174900 ubiquitin-conjugating enzyme, putative, expressed K06689: UBE2D, UBC4, ubiquitin-conjugating enzyme E2 D
9 Sobic.005G033200 expressed protein -
10 Sobic.001G094500 tentative name(PubMedID : 31536532)@Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed K11251: histone H2A
11 Sobic.003G264200 Ser/Thr protein phosphatase family protein, putative, expressed K15498: serine/threonine-protein phosphatase 6 catalytic subunit
12 Sobic.001G048100 OsAPRL5 adenosine 5\'-phosphosulfate reductase-like OsAPRL5, expressed -
13 Sobic.010G193800 zinc finger C-x8-C-x5-C-x3-H type family protein, expressed -
14 Sobic.002G110700 uncharacterized ACR, YggU family COG1872 containing protein, expressed K09131: uncharacterized protein
15 Sobic.001G329300 expressed protein -
16 Sobic.004G130100 ubiquitin-conjugating enzyme, putative, expressed K10704: ubiquitin-conjugating enzyme E2 variant
17 Sobic.001G038100 protein kinase PKN/PRK1, effector, putative, expressed -
18 Sobic.003G337000 ubiquitin-conjugating enzyme, putative, expressed K06689: UBE2D, UBC4, ubiquitin-conjugating enzyme E2 D
19 Sobic.010G000300 transmembrane BAX inhibitor motif-containing protein, putative, expressed -
20 Sobic.007G226100 14-3-3 protein, putative, expressed K06630: 14-3-3 protein epsilon


Gene co-expression network
sample Sobic001G526600 Sobic001G526600 Sobic003G071000 Sobic003G071000 Sobic001G526600--Sobic003G071000 Sobic001G175600 Sobic001G175600 Sobic001G526600--Sobic001G175600 Sobic010G184100 Sobic010G184100 Sobic001G526600--Sobic010G184100 Sobic002G204000 Sobic002G204000 Sobic001G526600--Sobic002G204000 Sobic001G266400 Sobic001G266400 Sobic001G526600--Sobic001G266400 Sobic009G015700 Sobic009G015700 Sobic001G526600--Sobic009G015700 Sobic004G001400 Sobic004G001400 Sobic001G526600--Sobic004G001400 Sobic009G174900 Sobic009G174900 Sobic001G526600--Sobic009G174900 Sobic005G033200 Sobic005G033200 Sobic001G526600--Sobic005G033200 Sobic010G082700 Sobic010G082700 Sobic003G071000--Sobic010G082700 Sobic003G054200 Sobic003G054200 Sobic003G071000--Sobic003G054200 Sobic002G110700 Sobic002G110700 Sobic003G071000--Sobic002G110700 Sobic003G071000--Sobic001G175600 Sobic010G000300 Sobic010G000300 Sobic003G071000--Sobic010G000300 Sobic009G049300 Sobic009G049300 Sobic003G071000--Sobic009G049300 Sobic003G071000--Sobic004G001400 Sobic002G105200 Sobic002G105200 Sobic003G071000--Sobic002G105200 Sobic001G395400 Sobic001G395400 Sobic003G071000--Sobic001G395400 Sobic001G175600--Sobic003G071000 Sobic001G175600--Sobic001G526600 Sobic008G088200 Sobic008G088200 Sobic001G175600--Sobic008G088200 Sobic001G175600--Sobic003G054200 Sobic001G008700 Sobic001G008700 Sobic001G175600--Sobic001G008700 Sobic010G253100 Sobic010G253100 Sobic001G175600--Sobic010G253100 Sobic010G037400 Sobic010G037400 Sobic001G175600--Sobic010G037400 Sobic003G159500 Sobic003G159500 Sobic001G175600--Sobic003G159500 Sobic001G175600--Sobic009G049300 Sobic010G184100--Sobic002G110700 Sobic009G165800 Sobic009G165800 Sobic010G184100--Sobic009G165800 Sobic001G048100 Sobic001G048100 Sobic010G184100--Sobic001G048100 Sobic002G054300 Sobic002G054300 Sobic010G184100--Sobic002G054300 Sobic001G080700 Sobic001G080700 Sobic010G184100--Sobic001G080700 Sobic001G391600 Sobic001G391600 Sobic010G184100--Sobic001G391600 Sobic007G159500 Sobic007G159500 Sobic010G184100--Sobic007G159500 Sobic002G401100 Sobic002G401100 Sobic010G184100--Sobic002G401100 Sobic001G386300 Sobic001G386300 Sobic010G184100--Sobic001G386300 Sobic001G038100 Sobic001G038100 Sobic002G204000--Sobic001G038100 Sobic004G186000 Sobic004G186000 Sobic002G204000--Sobic004G186000 Sobic004G316900 Sobic004G316900 Sobic002G204000--Sobic004G316900 Sobic004G019600 Sobic004G019600 Sobic002G204000--Sobic004G019600 Sobic001G329300 Sobic001G329300 Sobic002G204000--Sobic001G329300 Sobic010G193800 Sobic010G193800 Sobic002G204000--Sobic010G193800 Sobic004G226800 Sobic004G226800 Sobic002G204000--Sobic004G226800 Sobic001G136900 Sobic001G136900 Sobic002G204000--Sobic001G136900 Sobic001G507400 Sobic001G507400 Sobic002G204000--Sobic001G507400 Sobic001G350501 Sobic001G350501 Sobic001G266400--Sobic001G350501 Sobic001G266400--Sobic001G386300 Sobic002G087900 Sobic002G087900 Sobic001G266400--Sobic002G087900 Sobic001G266400--Sobic004G226800 Sobic010G068400 Sobic010G068400 Sobic001G266400--Sobic010G068400 Sobic007G226100 Sobic007G226100 Sobic001G266400--Sobic007G226100 Sobic003G345400 Sobic003G345400 Sobic001G266400--Sobic003G345400 Sobic001G266400--Sobic010G193800 Sobic001G375700 Sobic001G375700 Sobic001G266400--Sobic001G375700 Sobic009G017800 Sobic009G017800 Sobic009G015700--Sobic009G017800 Sobic007G122200 Sobic007G122200 Sobic009G015700--Sobic007G122200 Sobic003G402600 Sobic003G402600 Sobic009G015700--Sobic003G402600 Sobic001G407600 Sobic001G407600 Sobic009G015700--Sobic001G407600 Sobic009G015700--Sobic001G526600 Sobic005G026100 Sobic005G026100 Sobic009G015700--Sobic005G026100 Sobic003G238000 Sobic003G238000 Sobic009G015700--Sobic003G238000 Sobic002G291200 Sobic002G291200 Sobic009G015700--Sobic002G291200 Sobic002G363100 Sobic002G363100 Sobic009G015700--Sobic002G363100 Sobic003G050600 Sobic003G050600 Sobic004G001400--Sobic003G050600 Sobic004G060600 Sobic004G060600 Sobic004G001400--Sobic004G060600 Sobic007G166100 Sobic007G166100 Sobic004G001400--Sobic007G166100 Sobic007G203700 Sobic007G203700 Sobic004G001400--Sobic007G203700 Sobic004G001400--Sobic001G395400 Sobic004G001400--Sobic004G226800 Sobic002G256300 Sobic002G256300 Sobic004G001400--Sobic002G256300 Sobic006G049700 Sobic006G049700 Sobic004G001400--Sobic006G049700 Sobic001G364600 Sobic001G364600 Sobic004G001400--Sobic001G364600 Sobic003G337000 Sobic003G337000 Sobic009G174900--Sobic003G337000 Sobic002G400000 Sobic002G400000 Sobic009G174900--Sobic002G400000 Sobic004G327300 Sobic004G327300 Sobic009G174900--Sobic004G327300 Sobic009G135600 Sobic009G135600 Sobic009G174900--Sobic009G135600 Sobic007G168600 Sobic007G168600 Sobic009G174900--Sobic007G168600 Sobic006G212100 Sobic006G212100 Sobic009G174900--Sobic006G212100 Sobic001G491100 Sobic001G491100 Sobic009G174900--Sobic001G491100 Sobic002G134001 Sobic002G134001 Sobic009G174900--Sobic002G134001 Sobic001G054200 Sobic001G054200 Sobic009G174900--Sobic001G054200 Sobic003G264200 Sobic003G264200 Sobic005G033200--Sobic003G264200 Sobic001G314500 Sobic001G314500 Sobic005G033200--Sobic001G314500 Sobic001G428100 Sobic001G428100 Sobic005G033200--Sobic001G428100 Sobic004G130100 Sobic004G130100 Sobic005G033200--Sobic004G130100 Sobic005G111900 Sobic005G111900 Sobic005G033200--Sobic005G111900 Sobic003G349300 Sobic003G349300 Sobic005G033200--Sobic003G349300 Sobic009G217900 Sobic009G217900 Sobic005G033200--Sobic009G217900 Sobic003G440800 Sobic003G440800 Sobic005G033200--Sobic003G440800 Sobic005G033200--Sobic006G049700
Octagon: transcription factors


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