Gene annotation
Transcriptome id Sobic.003G071000.1
Synonym Sb03g006020, SLT1
Functional annotation SLT1 protein, putative, expressed
UniProt C5XPZ7
Pfam -
Panther DB PTHR33981 PTHR33981:SF4
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G37570 : HSP20-like chaperones superfamily protein
RAP-DB (Rice) LOC_Os01g05790.1 : SLT1 protein, putative, expressed
MaizeGDB (Corn) Zm00025a035644 , Zm00025a023452
Brachypodium KQK02731
Barley HORVU3Hr1G013710.1 , HORVU3Hr1G013710.3 , HORVU3Hr1G013710.2 , HORVU3Hr1G013710.5 , HORVU3Hr1G013710.4
Wheat TraesCS3B02G089700 , TraesCS3A02G075600 , TraesCS3D02G075700
Populus PNT22901 , PNT17747 , PNT17746


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cDNA sequences
Sobic.003G071000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G082700 expressed protein -
2 Sobic.003G054200 thioredoxin, putative, expressed K03671: thioredoxin 1
3 Sobic.002G110700 uncharacterized ACR, YggU family COG1872 containing protein, expressed K09131: uncharacterized protein
4 Sobic.001G175600 acyl carrier protein, putative, expressed K03955: NADH dehydrogenase (ubiquinone) 1 alpha/beta subcomplex 1, acyl-carrier protein
5 Sobic.010G000300 transmembrane BAX inhibitor motif-containing protein, putative, expressed -
6 Sobic.009G049300 zinc finger, C3HC4 type domain containing protein, expressed -
7 Sobic.004G001400 SKP1-like protein 1B, putative, expressed K03094: SKP1, S-phase kinase-associated protein 1
8 Sobic.002G105200 serine/threonine protein phosphatase 2A 59 kDa regulatory subunit Bgamma isoform, putative, expressed K11584: serine/threonine-protein phosphatase 2A regulatory subunit B'
9 Sobic.001G395400 ubiquitin-conjugating enzyme, putative, expressed K10578: UBE2J1, NCUBE1, ubiquitin-conjugating enzyme E2 J1
10 Sobic.007G166100 no apical meristem protein, putative, expressed -
11 Sobic.001G526600 ubiquitin-conjugating enzyme, putative, expressed K10577: UBE2I, ubiquitin-conjugating enzyme E2 I
12 Sobic.001G437100 expressed protein -
13 Sobic.001G473600 ZOS5-06 - C2H2 zinc finger protein, expressed -
14 Sobic.007G128500 expressed protein -
15 Sobic.004G186000 salt tolerant protein, putative, expressed -
16 Sobic.005G160400 zinc finger, C3HC4 type domain containing protein, expressed K19043: E3 ubiquitin-protein ligase RHF
17 Sobic.002G204000 26S proteasome non-ATPase regulatory subunit 9, putative, expressed K06693: PSMD9, 26S proteasome regulatory subunit N4
18 Sobic.001G539500 SKP1, putative, expressed -
19 Sobic.007G159500 uncharacterized protein, YigZ family, putative, expressed -
20 Sobic.004G116000 expressed protein -


Gene co-expression network
sample Sobic003G071000 Sobic003G071000 Sobic010G082700 Sobic010G082700 Sobic003G071000--Sobic010G082700 Sobic003G054200 Sobic003G054200 Sobic003G071000--Sobic003G054200 Sobic002G110700 Sobic002G110700 Sobic003G071000--Sobic002G110700 Sobic001G175600 Sobic001G175600 Sobic003G071000--Sobic001G175600 Sobic010G000300 Sobic010G000300 Sobic003G071000--Sobic010G000300 Sobic009G049300 Sobic009G049300 Sobic003G071000--Sobic009G049300 Sobic004G001400 Sobic004G001400 Sobic003G071000--Sobic004G001400 Sobic002G105200 Sobic002G105200 Sobic003G071000--Sobic002G105200 Sobic001G395400 Sobic001G395400 Sobic003G071000--Sobic001G395400 Sobic001G473600 Sobic001G473600 Sobic010G082700--Sobic001G473600 Sobic007G078600 Sobic007G078600 Sobic010G082700--Sobic007G078600 Sobic010G082700--Sobic003G071000 Sobic005G160400 Sobic005G160400 Sobic010G082700--Sobic005G160400 Sobic007G078500 Sobic007G078500 Sobic010G082700--Sobic007G078500 Sobic009G179700 Sobic009G179700 Sobic010G082700--Sobic009G179700 Sobic010G021500 Sobic010G021500 Sobic010G082700--Sobic010G021500 Sobic003G298100 Sobic003G298100 Sobic010G082700--Sobic003G298100 Sobic010G082700--Sobic009G049300 Sobic003G054200--Sobic003G071000 Sobic002G309800 Sobic002G309800 Sobic003G054200--Sobic002G309800 Sobic002G242200 Sobic002G242200 Sobic003G054200--Sobic002G242200 Sobic001G108900 Sobic001G108900 Sobic003G054200--Sobic001G108900 Sobic006G252300 Sobic006G252300 Sobic003G054200--Sobic006G252300 Sobic002G125900 Sobic002G125900 Sobic003G054200--Sobic002G125900 Sobic003G054200--Sobic005G160400 Sobic005G044400 Sobic005G044400 Sobic003G054200--Sobic005G044400 Sobic003G054200--Sobic010G082700 Sobic009G165800 Sobic009G165800 Sobic002G110700--Sobic009G165800 Sobic010G027600 Sobic010G027600 Sobic002G110700--Sobic010G027600 Sobic004G121100 Sobic004G121100 Sobic002G110700--Sobic004G121100 Sobic010G184100 Sobic010G184100 Sobic002G110700--Sobic010G184100 Sobic001G080700 Sobic001G080700 Sobic002G110700--Sobic001G080700 Sobic002G110700--Sobic007G078500 Sobic007G166100 Sobic007G166100 Sobic002G110700--Sobic007G166100 Sobic003G250500 Sobic003G250500 Sobic002G110700--Sobic003G250500 Sobic002G113900 Sobic002G113900 Sobic002G110700--Sobic002G113900 Sobic001G175600--Sobic003G071000 Sobic001G526600 Sobic001G526600 Sobic001G175600--Sobic001G526600 Sobic008G088200 Sobic008G088200 Sobic001G175600--Sobic008G088200 Sobic001G175600--Sobic003G054200 Sobic001G008700 Sobic001G008700 Sobic001G175600--Sobic001G008700 Sobic010G253100 Sobic010G253100 Sobic001G175600--Sobic010G253100 Sobic010G037400 Sobic010G037400 Sobic001G175600--Sobic010G037400 Sobic003G159500 Sobic003G159500 Sobic001G175600--Sobic003G159500 Sobic001G175600--Sobic009G049300 Sobic010G000300--Sobic007G166100 Sobic001G218800 Sobic001G218800 Sobic010G000300--Sobic001G218800 Sobic010G000300--Sobic010G037400 Sobic002G347000 Sobic002G347000 Sobic010G000300--Sobic002G347000 Sobic003G123000 Sobic003G123000 Sobic010G000300--Sobic003G123000 Sobic001G114500 Sobic001G114500 Sobic010G000300--Sobic001G114500 Sobic010G000300--Sobic003G071000 Sobic003G273400 Sobic003G273400 Sobic010G000300--Sobic003G273400 Sobic010G000300--Sobic009G049300 Sobic009G049300--Sobic005G160400 Sobic009G049300--Sobic007G078600 Sobic006G096900 Sobic006G096900 Sobic009G049300--Sobic006G096900 Sobic009G049300--Sobic010G082700 Sobic009G049300--Sobic001G080700 Sobic009G049300--Sobic010G021500 Sobic007G136800 Sobic007G136800 Sobic009G049300--Sobic007G136800 Sobic002G121600 Sobic002G121600 Sobic009G049300--Sobic002G121600 Sobic007G159500 Sobic007G159500 Sobic009G049300--Sobic007G159500 Sobic003G050600 Sobic003G050600 Sobic004G001400--Sobic003G050600 Sobic004G060600 Sobic004G060600 Sobic004G001400--Sobic004G060600 Sobic004G001400--Sobic007G166100 Sobic007G203700 Sobic007G203700 Sobic004G001400--Sobic007G203700 Sobic004G001400--Sobic001G395400 Sobic004G226800 Sobic004G226800 Sobic004G001400--Sobic004G226800 Sobic002G256300 Sobic002G256300 Sobic004G001400--Sobic002G256300 Sobic006G049700 Sobic006G049700 Sobic004G001400--Sobic006G049700 Sobic001G364600 Sobic001G364600 Sobic004G001400--Sobic001G364600 Sobic002G382600 Sobic002G382600 Sobic002G105200--Sobic002G382600 Sobic003G416400 Sobic003G416400 Sobic002G105200--Sobic003G416400 Sobic004G237400 Sobic004G237400 Sobic002G105200--Sobic004G237400 Sobic003G053800 Sobic003G053800 Sobic002G105200--Sobic003G053800 Sobic010G020300 Sobic010G020300 Sobic002G105200--Sobic010G020300 Sobic003G352200 Sobic003G352200 Sobic002G105200--Sobic003G352200 Sobic001G296900 Sobic001G296900 Sobic002G105200--Sobic001G296900 Sobic002G105200--Sobic001G473600 Sobic004G091200 Sobic004G091200 Sobic002G105200--Sobic004G091200 Sobic001G395400--Sobic007G166100 Sobic002G400000 Sobic002G400000 Sobic001G395400--Sobic002G400000 Sobic006G263900 Sobic006G263900 Sobic001G395400--Sobic006G263900 Sobic001G395400--Sobic003G416400 Sobic010G168600 Sobic010G168600 Sobic001G395400--Sobic010G168600 Sobic003G077900 Sobic003G077900 Sobic001G395400--Sobic003G077900 Sobic010G000900 Sobic010G000900 Sobic001G395400--Sobic010G000900 Sobic001G057800 Sobic001G057800 Sobic001G395400--Sobic001G057800 Sobic001G395400--Sobic009G165800
Octagon: transcription factors


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