Gene annotation
Transcriptome id Sobic.003G054200.1
Synonym TH9, Sb03g004670, ATH9, TRXH9
Functional annotation thioredoxin, putative, expressed
UniProt A0A1B6Q1K5
Pfam PF00085
Panther DB PTHR10438 PTHR10438:SF240
NCBI CDD KOG0907; Thioredoxin
KEGG Orthology K03671; thioredoxin 1
Gene Ontology GO:0015035; protein disulfide oxidoreductase activity GO:0006662glycerol ether metabolic process


Orthologs (automatic annotation)
TAIR AT3G08710 : thioredoxin H-type 9
RAP-DB (Rice) LOC_Os01g07376.1 : thioredoxin, putative, expressed
MaizeGDB (Corn) Zm00025a023297
Brachypodium KQK07307
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.003G054200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G071000 SLT1 protein, putative, expressed -
2 Sobic.002G309800 casein kinase II subunit beta-4, putative, expressed K03115: casein kinase II subunit beta
3 Sobic.002G242200 expressed protein -
4 Sobic.001G108900 expressed protein -
5 Sobic.006G252300 BSD domain-containing protein, putative, expressed -
6 Sobic.002G125900 ORM1, putative, expressed -
7 Sobic.005G160400 zinc finger, C3HC4 type domain containing protein, expressed K19043: E3 ubiquitin-protein ligase RHF
8 Sobic.005G044400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@response regulator receiver domain containing protein, expressed K12130: pseudo-response regulator 5
9 Sobic.010G082700 expressed protein -
10 Sobic.010G167900 expressed protein K14376: poly(A) polymerase
11 Sobic.002G105200 serine/threonine protein phosphatase 2A 59 kDa regulatory subunit Bgamma isoform, putative, expressed K11584: serine/threonine-protein phosphatase 2A regulatory subunit B'
12 Sobic.010G092300 N-rich protein, putative, expressed -
13 Sobic.007G078500 serine/threonine-protein kinase HT1, putative, expressed -
14 Sobic.002G404200 F-box domain containing protein, expressed -
15 Sobic.002G122600 ankyrin repeat domain containing protein, expressed -
16 Sobic.003G053800 WD40-like domain containing protein, putative, expressed -
17 Sobic.001G175600 acyl carrier protein, putative, expressed K03955: NADH dehydrogenase (ubiquinone) 1 alpha/beta subcomplex 1, acyl-carrier protein
18 Sobic.004G186000 salt tolerant protein, putative, expressed -
19 Sobic.003G340600 VHS and GAT domain containing protein, expressed -
20 Sobic.004G063100 calmodulin binding protein, putative, expressed -


Gene co-expression network
sample Sobic003G054200 Sobic003G054200 Sobic003G071000 Sobic003G071000 Sobic003G054200--Sobic003G071000 Sobic002G309800 Sobic002G309800 Sobic003G054200--Sobic002G309800 Sobic002G242200 Sobic002G242200 Sobic003G054200--Sobic002G242200 Sobic001G108900 Sobic001G108900 Sobic003G054200--Sobic001G108900 Sobic006G252300 Sobic006G252300 Sobic003G054200--Sobic006G252300 Sobic002G125900 Sobic002G125900 Sobic003G054200--Sobic002G125900 Sobic005G160400 Sobic005G160400 Sobic003G054200--Sobic005G160400 Sobic005G044400 Sobic005G044400 Sobic003G054200--Sobic005G044400 Sobic010G082700 Sobic010G082700 Sobic003G054200--Sobic010G082700 Sobic003G071000--Sobic010G082700 Sobic003G071000--Sobic003G054200 Sobic002G110700 Sobic002G110700 Sobic003G071000--Sobic002G110700 Sobic001G175600 Sobic001G175600 Sobic003G071000--Sobic001G175600 Sobic010G000300 Sobic010G000300 Sobic003G071000--Sobic010G000300 Sobic009G049300 Sobic009G049300 Sobic003G071000--Sobic009G049300 Sobic004G001400 Sobic004G001400 Sobic003G071000--Sobic004G001400 Sobic002G105200 Sobic002G105200 Sobic003G071000--Sobic002G105200 Sobic001G395400 Sobic001G395400 Sobic003G071000--Sobic001G395400 Sobic009G065100 Sobic009G065100 Sobic002G309800--Sobic009G065100 Sobic001G253200 Sobic001G253200 Sobic002G309800--Sobic001G253200 Sobic010G056200 Sobic010G056200 Sobic002G309800--Sobic010G056200 Sobic007G054400 Sobic007G054400 Sobic002G309800--Sobic007G054400 Sobic009G215800 Sobic009G215800 Sobic002G309800--Sobic009G215800 Sobic005G079800 Sobic005G079800 Sobic002G309800--Sobic005G079800 Sobic009G070100 Sobic009G070100 Sobic002G309800--Sobic009G070100 Sobic007G078600 Sobic007G078600 Sobic002G309800--Sobic007G078600 Sobic004G087600 Sobic004G087600 Sobic002G309800--Sobic004G087600 Sobic007G097900 Sobic007G097900 Sobic002G242200--Sobic007G097900 Sobic002G242200--Sobic005G160400 Sobic003G127300 Sobic003G127300 Sobic002G242200--Sobic003G127300 Sobic003G299000 Sobic003G299000 Sobic002G242200--Sobic003G299000 Sobic010G092300 Sobic010G092300 Sobic002G242200--Sobic010G092300 Sobic001G207500 Sobic001G207500 Sobic002G242200--Sobic001G207500 Sobic010G265300 Sobic010G265300 Sobic002G242200--Sobic010G265300 Sobic004G318000 Sobic004G318000 Sobic002G242200--Sobic004G318000 Sobic002G009200 Sobic002G009200 Sobic002G242200--Sobic002G009200 Sobic001G222900 Sobic001G222900 Sobic001G108900--Sobic001G222900 Sobic007G117100 Sobic007G117100 Sobic001G108900--Sobic007G117100 Sobic003G140900 Sobic003G140900 Sobic001G108900--Sobic003G140900 Sobic001G294700 Sobic001G294700 Sobic001G108900--Sobic001G294700 Sobic002G106900 Sobic002G106900 Sobic001G108900--Sobic002G106900 Sobic004G017950 Sobic004G017950 Sobic001G108900--Sobic004G017950 Sobic001G309100 Sobic001G309100 Sobic001G108900--Sobic001G309100 Sobic004G246700 Sobic004G246700 Sobic001G108900--Sobic004G246700 Sobic001G426900 Sobic001G426900 Sobic001G108900--Sobic001G426900 Sobic001G281600 Sobic001G281600 Sobic006G252300--Sobic001G281600 Sobic006G252300--Sobic002G309800 Sobic007G078500 Sobic007G078500 Sobic006G252300--Sobic007G078500 Sobic004G121100 Sobic004G121100 Sobic006G252300--Sobic004G121100 Sobic004G205600 Sobic004G205600 Sobic006G252300--Sobic004G205600 Sobic008G128600 Sobic008G128600 Sobic006G252300--Sobic008G128600 Sobic006G200600 Sobic006G200600 Sobic006G252300--Sobic006G200600 Sobic008G062000 Sobic008G062000 Sobic006G252300--Sobic008G062000 Sobic003G084700 Sobic003G084700 Sobic006G252300--Sobic003G084700 Sobic006G263000 Sobic006G263000 Sobic002G125900--Sobic006G263000 Sobic007G120401 Sobic007G120401 Sobic002G125900--Sobic007G120401 Sobic001G351400 Sobic001G351400 Sobic002G125900--Sobic001G351400 Sobic002G404200 Sobic002G404200 Sobic002G125900--Sobic002G404200 Sobic002G040800 Sobic002G040800 Sobic002G125900--Sobic002G040800 Sobic003G222300 Sobic003G222300 Sobic002G125900--Sobic003G222300 Sobic008G146900 Sobic008G146900 Sobic002G125900--Sobic008G146900 Sobic004G210900 Sobic004G210900 Sobic002G125900--Sobic004G210900 Sobic003G314500 Sobic003G314500 Sobic002G125900--Sobic003G314500 Sobic009G092400 Sobic009G092400 Sobic005G160400--Sobic009G092400 Sobic007G084100 Sobic007G084100 Sobic005G160400--Sobic007G084100 Sobic010G237900 Sobic010G237900 Sobic005G160400--Sobic010G237900 Sobic005G160400--Sobic010G092300 Sobic002G347000 Sobic002G347000 Sobic005G160400--Sobic002G347000 Sobic001G473600 Sobic001G473600 Sobic005G160400--Sobic001G473600 Sobic005G160400--Sobic010G265300 Sobic006G121300 Sobic006G121300 Sobic005G160400--Sobic006G121300 Sobic001G114500 Sobic001G114500 Sobic005G160400--Sobic001G114500 Sobic003G103200 Sobic003G103200 Sobic005G044400--Sobic003G103200 Sobic002G181300 Sobic002G181300 Sobic005G044400--Sobic002G181300 Sobic005G044400--Sobic003G054200 Sobic007G110200 Sobic007G110200 Sobic005G044400--Sobic007G110200 Sobic004G181700 Sobic004G181700 Sobic005G044400--Sobic004G181700 Sobic010G207500 Sobic010G207500 Sobic005G044400--Sobic010G207500 Sobic004G317100 Sobic004G317100 Sobic005G044400--Sobic004G317100 Sobic005G044400--Sobic002G125900 Sobic002G137300 Sobic002G137300 Sobic005G044400--Sobic002G137300 Sobic010G082700--Sobic001G473600 Sobic010G082700--Sobic007G078600 Sobic010G082700--Sobic003G071000 Sobic010G082700--Sobic005G160400 Sobic010G082700--Sobic007G078500 Sobic009G179700 Sobic009G179700 Sobic010G082700--Sobic009G179700 Sobic010G021500 Sobic010G021500 Sobic010G082700--Sobic010G021500 Sobic003G298100 Sobic003G298100 Sobic010G082700--Sobic003G298100 Sobic010G082700--Sobic009G049300
Octagon: transcription factors


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