Gene annotation
Transcriptome id Sobic.002G105200.1,Sobic.002G105200.3,Sobic.002G105200.2,Sobic.002G105200.4
Synonym ATB\'GAMMA, Sb02g008950
Functional annotation serine/threonine protein phosphatase 2A 59 kDa regulatory subunit Bgamma isoform, putative, expressed
UniProt C5X3J4
Pfam PF01603
Panther DB PTHR10257 PTHR10257:SF18
NCBI CDD -
KEGG Orthology K11584; serine/threonine-protein phosphatase 2A regulatory subunit B'
Gene Ontology GO:0007165; signal transduction GO:0000159protein phosphatase type 2A complex


Orthologs (automatic annotation)
TAIR AT3G26020 : Protein phosphatase 2A regulatory B subunit family protein
RAP-DB (Rice) LOC_Os07g17360.1,LOC_Os07g17360.2 : transposon protein, putative, unclassified, expressed
MaizeGDB (Corn) Zm00025a040321 , Zm00025a013644 , Zm00025a045587
Brachypodium KQJ94922
Barley HORVU7Hr1G074840.2 , HORVU7Hr1G074840.3 , HORVU7Hr1G074840.1
Wheat TraesCS7D02G310200 , TraesCS7B02G214300 , TraesCS7B02G214300
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G382600 expressed protein -
2 Sobic.003G416400 WD40-like domain containing protein, putative, expressed -
3 Sobic.004G237400 cullin, putative, expressed K03869: cullin 3
4 Sobic.003G053800 WD40-like domain containing protein, putative, expressed -
5 Sobic.010G020300 spastin, putative, expressed K13254: spastin
6 Sobic.003G352200 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
7 Sobic.001G296900 dual specificity protein phosphatase, putative, expressed -
8 Sobic.001G473600 ZOS5-06 - C2H2 zinc finger protein, expressed -
9 Sobic.004G091200 histone deacetylase 19, putative, expressed K06067: histone deacetylase 1/2
10 Sobic.003G436300 expressed protein -
11 Sobic.003G116900 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@dynein light chain type 1 domain containing protein, expressed K10418: dynein light chain LC8-type
12 Sobic.001G436900 autophagy protein 9, putative, expressed K17907: autophagy-related protein 9
13 Sobic.004G065000 expressed protein -
14 Sobic.006G004500 arginase, putative, expressed K01476: E3.5.3.1, rocF, arginase
15 Sobic.009G113000 chaperone protein dnaJ 49, putative, expressed K09518: DnaJ homolog subfamily B member 12
16 Sobic.010G264200 UPF0183 protein, putative, expressed -
17 Sobic.003G201900 coiled-coil domain-containing protein, putative, expressed -
18 Sobic.004G177300 SPRY-domain containing protein, putative, expressed -
19 Sobic.003G071000 SLT1 protein, putative, expressed -
20 Sobic.006G115600 expressed protein -


Gene co-expression network
sample Sobic002G105200 Sobic002G105200 Sobic002G382600 Sobic002G382600 Sobic002G105200--Sobic002G382600 Sobic003G416400 Sobic003G416400 Sobic002G105200--Sobic003G416400 Sobic004G237400 Sobic004G237400 Sobic002G105200--Sobic004G237400 Sobic003G053800 Sobic003G053800 Sobic002G105200--Sobic003G053800 Sobic010G020300 Sobic010G020300 Sobic002G105200--Sobic010G020300 Sobic003G352200 Sobic003G352200 Sobic002G105200--Sobic003G352200 Sobic001G296900 Sobic001G296900 Sobic002G105200--Sobic001G296900 Sobic001G473600 Sobic001G473600 Sobic002G105200--Sobic001G473600 Sobic004G091200 Sobic004G091200 Sobic002G105200--Sobic004G091200 Sobic002G382600--Sobic002G105200 Sobic010G167900 Sobic010G167900 Sobic002G382600--Sobic010G167900 Sobic009G113000 Sobic009G113000 Sobic002G382600--Sobic009G113000 Sobic002G382600--Sobic004G237400 Sobic010G264200 Sobic010G264200 Sobic002G382600--Sobic010G264200 Sobic004G331100 Sobic004G331100 Sobic002G382600--Sobic004G331100 Sobic001G279100 Sobic001G279100 Sobic002G382600--Sobic001G279100 Sobic001G109800 Sobic001G109800 Sobic002G382600--Sobic001G109800 Sobic001G436900 Sobic001G436900 Sobic002G382600--Sobic001G436900 Sobic001G395400 Sobic001G395400 Sobic003G416400--Sobic001G395400 Sobic003G416400--Sobic002G105200 Sobic002G375300 Sobic002G375300 Sobic003G416400--Sobic002G375300 Sobic001G057800 Sobic001G057800 Sobic003G416400--Sobic001G057800 Sobic003G077900 Sobic003G077900 Sobic003G416400--Sobic003G077900 Sobic002G400000 Sobic002G400000 Sobic003G416400--Sobic002G400000 Sobic003G201900 Sobic003G201900 Sobic003G416400--Sobic003G201900 Sobic002G385900 Sobic002G385900 Sobic003G416400--Sobic002G385900 Sobic001G323000 Sobic001G323000 Sobic003G416400--Sobic001G323000 Sobic004G237400--Sobic002G105200 Sobic004G237400--Sobic009G113000 Sobic004G237400--Sobic003G352200 Sobic004G237400--Sobic002G382600 Sobic006G115600 Sobic006G115600 Sobic004G237400--Sobic006G115600 Sobic006G004500 Sobic006G004500 Sobic004G237400--Sobic006G004500 Sobic004G264400 Sobic004G264400 Sobic004G237400--Sobic004G264400 Sobic010G164000 Sobic010G164000 Sobic004G237400--Sobic010G164000 Sobic004G237400--Sobic001G473600 Sobic003G053800--Sobic001G296900 Sobic003G053800--Sobic002G105200 Sobic003G053800--Sobic010G020300 Sobic001G085100 Sobic001G085100 Sobic003G053800--Sobic001G085100 Sobic001G124200 Sobic001G124200 Sobic003G053800--Sobic001G124200 Sobic001G161900 Sobic001G161900 Sobic003G053800--Sobic001G161900 Sobic003G053800--Sobic010G164000 Sobic008G076800 Sobic008G076800 Sobic003G053800--Sobic008G076800 Sobic002G303600 Sobic002G303600 Sobic003G053800--Sobic002G303600 Sobic010G020300--Sobic001G124200 Sobic010G205800 Sobic010G205800 Sobic010G020300--Sobic010G205800 Sobic004G065000 Sobic004G065000 Sobic010G020300--Sobic004G065000 Sobic001G390800 Sobic001G390800 Sobic010G020300--Sobic001G390800 Sobic010G020300--Sobic003G352200 Sobic004G177300 Sobic004G177300 Sobic010G020300--Sobic004G177300 Sobic010G278200 Sobic010G278200 Sobic010G020300--Sobic010G278200 Sobic001G227400 Sobic001G227400 Sobic010G020300--Sobic001G227400 Sobic001G121200 Sobic001G121200 Sobic010G020300--Sobic001G121200 Sobic009G044800 Sobic009G044800 Sobic003G352200--Sobic009G044800 Sobic003G352200--Sobic001G473600 Sobic002G034600 Sobic002G034600 Sobic003G352200--Sobic002G034600 Sobic004G274200 Sobic004G274200 Sobic003G352200--Sobic004G274200 Sobic003G155900 Sobic003G155900 Sobic003G352200--Sobic003G155900 Sobic004G066200 Sobic004G066200 Sobic003G352200--Sobic004G066200 Sobic002G045600 Sobic002G045600 Sobic003G352200--Sobic002G045600 Sobic003G352200--Sobic001G109800 Sobic001G088100 Sobic001G088100 Sobic003G352200--Sobic001G088100 Sobic001G296900--Sobic003G053800 Sobic009G243100 Sobic009G243100 Sobic001G296900--Sobic009G243100 Sobic001G296900--Sobic010G020300 Sobic005G160400 Sobic005G160400 Sobic001G296900--Sobic005G160400 Sobic001G296900--Sobic002G105200 Sobic003G422900 Sobic003G422900 Sobic001G296900--Sobic003G422900 Sobic001G296900--Sobic001G395400 Sobic007G166100 Sobic007G166100 Sobic001G296900--Sobic007G166100 Sobic003G436300 Sobic003G436300 Sobic001G296900--Sobic003G436300 Sobic001G473600--Sobic002G034600 Sobic001G473600--Sobic003G352200 Sobic007G046200 Sobic007G046200 Sobic001G473600--Sobic007G046200 Sobic001G395100 Sobic001G395100 Sobic001G473600--Sobic001G395100 Sobic004G353000 Sobic004G353000 Sobic001G473600--Sobic004G353000 Sobic007G084100 Sobic007G084100 Sobic001G473600--Sobic007G084100 Sobic001G473600--Sobic001G088100 Sobic007G041300 Sobic007G041300 Sobic001G473600--Sobic007G041300 Sobic007G075900 Sobic007G075900 Sobic001G473600--Sobic007G075900 Sobic009G258400 Sobic009G258400 Sobic004G091200--Sobic009G258400 Sobic001G005600 Sobic001G005600 Sobic004G091200--Sobic001G005600 Sobic003G005200 Sobic003G005200 Sobic004G091200--Sobic003G005200 Sobic010G129600 Sobic010G129600 Sobic004G091200--Sobic010G129600 Sobic004G091200--Sobic001G473600 Sobic001G114500 Sobic001G114500 Sobic004G091200--Sobic001G114500 Sobic004G091200--Sobic002G105200 Sobic004G091200--Sobic003G201900 Sobic003G038600 Sobic003G038600 Sobic004G091200--Sobic003G038600
Octagon: transcription factors


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