Gene annotation
Transcriptome id Sobic.010G264200.1
Synonym Sb10g030020
Functional annotation UPF0183 protein, putative, expressed
UniProt C5Z1U4 , A0A1W0VV00
Pfam PF03676
Panther DB PTHR13465
NCBI CDD KOG2819; Uncharacterized conserved protein
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G51130 : -
RAP-DB (Rice) LOC_Os06g49990.3 : UPF0183 protein, putative, expressed
MaizeGDB (Corn) Zm00025a018473
Brachypodium KQK17527
Barley HORVU7Hr1G091220.6 , HORVU7Hr1G091220.5 , HORVU7Hr1G091220.4 , HORVU7Hr1G091220.3 , HORVU7Hr1G091220.2 , HORVU7Hr1G091220.1
Wheat TraesCS7B02G286900 , TraesCS7B02G286900 , TraesCS7A02G384200 , TraesCS7A02G384200 , TraesCS7A02G384200 , TraesCS7D02G380700 , TraesCS7D02G380700
Populus PNT26525 , PNT26524 , PNT26523 , PNT36270 , PNT36271 , PNT36272 , PNT36273 , PNT36269


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cDNA sequences
Sobic.010G264200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G024700 serine/threonine protein phosphatase 2A 59 kDa regulatory subunit Bgamma isoform, putative, expressed K11584: serine/threonine-protein phosphatase 2A regulatory subunit B'
2 Sobic.010G130200 BPI/LBP family protein At3g20270 precursor, putative, expressed K05399: lipopolysaccharide-binding protein
3 Sobic.002G382600 expressed protein -
4 Sobic.009G249200 transmembrane protein, putative, expressed -
5 Sobic.001G124200 ethylene receptor, putative, expressed K14509: ETR, ethylene receptor
6 Sobic.010G020300 spastin, putative, expressed K13254: spastin
7 Sobic.001G466700 peptidyl-prolyl cis-trans isomerase, putative, expressed K10598: PPIL2, CYC4, peptidyl-prolyl cis-trans isomerase-like 2
8 Sobic.001G436900 autophagy protein 9, putative, expressed K17907: autophagy-related protein 9
9 Sobic.006G083600 expressed protein K10134: etoposide-induced 2.4 mRNA
10 Sobic.001G121200 zinc finger, C3HC4 type domain containing protein, expressed -
11 Sobic.004G331100 WD domain and HEAT domain containing protein, putative, expressed K08333: PIK3R4, phosphoinositide-3-kinase, regulatory subunit 4
12 Sobic.003G408500 beclin-1, putative, expressed K08334: BECN, VPS30, beclin
13 Sobic.004G065000 expressed protein -
14 Sobic.002G132000 serine/threonine-protein kinase AFC2, putative, expressed K08287: dual-specificity kinase
15 Sobic.009G138100 disease resistance protein RGA3, putative, expressed -
16 Sobic.001G365600 OsPOP8 - Putative Prolyl Oligopeptidase homologue, expressed -
17 Sobic.009G172400 VHS and GAT domain containing protein, expressed -
18 Sobic.003G305200 glycerophosphoryl diester phosphodiesterase family protein, putative, expressed K01126: E3.1.4.46, glpQ, glycerophosphoryl diester phosphodiesterase
19 Sobic.004G347400 pumilio-family RNA binding protein, putative, expressed K17943: pumilio RNA-binding family
20 Sobic.001G390800 transcription factor HBP-1b, putative, expressed K14431: transcription factor TGA


Gene co-expression network
sample Sobic010G264200 Sobic010G264200 Sobic007G024700 Sobic007G024700 Sobic010G264200--Sobic007G024700 Sobic010G130200 Sobic010G130200 Sobic010G264200--Sobic010G130200 Sobic002G382600 Sobic002G382600 Sobic010G264200--Sobic002G382600 Sobic009G249200 Sobic009G249200 Sobic010G264200--Sobic009G249200 Sobic001G124200 Sobic001G124200 Sobic010G264200--Sobic001G124200 Sobic010G020300 Sobic010G020300 Sobic010G264200--Sobic010G020300 Sobic001G466700 Sobic001G466700 Sobic010G264200--Sobic001G466700 Sobic001G436900 Sobic001G436900 Sobic010G264200--Sobic001G436900 Sobic006G083600 Sobic006G083600 Sobic010G264200--Sobic006G083600 Sobic002G270500 Sobic002G270500 Sobic007G024700--Sobic002G270500 Sobic009G094300 Sobic009G094300 Sobic007G024700--Sobic009G094300 Sobic007G024700--Sobic009G249200 Sobic004G052900 Sobic004G052900 Sobic007G024700--Sobic004G052900 Sobic001G270400 Sobic001G270400 Sobic007G024700--Sobic001G270400 Sobic004G264400 Sobic004G264400 Sobic007G024700--Sobic004G264400 Sobic003G305200 Sobic003G305200 Sobic007G024700--Sobic003G305200 Sobic002G132000 Sobic002G132000 Sobic007G024700--Sobic002G132000 Sobic002G419800 Sobic002G419800 Sobic007G024700--Sobic002G419800 Sobic010G130200--Sobic006G083600 Sobic001G111150 Sobic001G111150 Sobic010G130200--Sobic001G111150 Sobic010G130200--Sobic003G305200 Sobic006G271200 Sobic006G271200 Sobic010G130200--Sobic006G271200 Sobic010G130200--Sobic002G270500 Sobic010G130200--Sobic010G264200 Sobic003G354400 Sobic003G354400 Sobic010G130200--Sobic003G354400 Sobic010G130200--Sobic007G024700 Sobic005G203800 Sobic005G203800 Sobic010G130200--Sobic005G203800 Sobic002G105200 Sobic002G105200 Sobic002G382600--Sobic002G105200 Sobic010G167900 Sobic010G167900 Sobic002G382600--Sobic010G167900 Sobic009G113000 Sobic009G113000 Sobic002G382600--Sobic009G113000 Sobic004G237400 Sobic004G237400 Sobic002G382600--Sobic004G237400 Sobic002G382600--Sobic010G264200 Sobic004G331100 Sobic004G331100 Sobic002G382600--Sobic004G331100 Sobic001G279100 Sobic001G279100 Sobic002G382600--Sobic001G279100 Sobic001G109800 Sobic001G109800 Sobic002G382600--Sobic001G109800 Sobic002G382600--Sobic001G436900 Sobic009G249200--Sobic007G024700 Sobic001G409600 Sobic001G409600 Sobic009G249200--Sobic001G409600 Sobic006G237400 Sobic006G237400 Sobic009G249200--Sobic006G237400 Sobic009G166300 Sobic009G166300 Sobic009G249200--Sobic009G166300 Sobic004G021100 Sobic004G021100 Sobic009G249200--Sobic004G021100 Sobic010G205800 Sobic010G205800 Sobic009G249200--Sobic010G205800 Sobic003G408500 Sobic003G408500 Sobic009G249200--Sobic003G408500 Sobic002G315200 Sobic002G315200 Sobic009G249200--Sobic002G315200 Sobic009G027300 Sobic009G027300 Sobic009G249200--Sobic009G027300 Sobic001G124200--Sobic010G205800 Sobic001G124200--Sobic010G020300 Sobic003G155900 Sobic003G155900 Sobic001G124200--Sobic003G155900 Sobic004G039600 Sobic004G039600 Sobic001G124200--Sobic004G039600 Sobic010G278200 Sobic010G278200 Sobic001G124200--Sobic010G278200 Sobic007G132100 Sobic007G132100 Sobic001G124200--Sobic007G132100 Sobic009G138100 Sobic009G138100 Sobic001G124200--Sobic009G138100 Sobic001G390800 Sobic001G390800 Sobic001G124200--Sobic001G390800 Sobic009G228700 Sobic009G228700 Sobic001G124200--Sobic009G228700 Sobic010G020300--Sobic001G124200 Sobic010G020300--Sobic010G205800 Sobic004G065000 Sobic004G065000 Sobic010G020300--Sobic004G065000 Sobic010G020300--Sobic001G390800 Sobic003G352200 Sobic003G352200 Sobic010G020300--Sobic003G352200 Sobic004G177300 Sobic004G177300 Sobic010G020300--Sobic004G177300 Sobic010G020300--Sobic010G278200 Sobic001G227400 Sobic001G227400 Sobic010G020300--Sobic001G227400 Sobic001G121200 Sobic001G121200 Sobic010G020300--Sobic001G121200 Sobic006G252700 Sobic006G252700 Sobic001G466700--Sobic006G252700 Sobic003G081000 Sobic003G081000 Sobic001G466700--Sobic003G081000 Sobic001G143500 Sobic001G143500 Sobic001G466700--Sobic001G143500 Sobic002G388200 Sobic002G388200 Sobic001G466700--Sobic002G388200 Sobic001G371200 Sobic001G371200 Sobic001G466700--Sobic001G371200 Sobic001G466700--Sobic004G021100 Sobic007G119200 Sobic007G119200 Sobic001G466700--Sobic007G119200 Sobic009G056800 Sobic009G056800 Sobic001G466700--Sobic009G056800 Sobic007G118200 Sobic007G118200 Sobic001G466700--Sobic007G118200 Sobic001G436900--Sobic004G331100 Sobic003G320700 Sobic003G320700 Sobic001G436900--Sobic003G320700 Sobic001G436900--Sobic004G065000 Sobic001G436900--Sobic006G271200 Sobic006G204900 Sobic006G204900 Sobic001G436900--Sobic006G204900 Sobic007G075400 Sobic007G075400 Sobic001G436900--Sobic007G075400 Sobic001G436900--Sobic009G113000 Sobic001G436900--Sobic002G382600 Sobic001G436900--Sobic010G264200 Sobic006G083600--Sobic010G130200 Sobic006G083600--Sobic003G305200 Sobic002G189400 Sobic002G189400 Sobic006G083600--Sobic002G189400 Sobic006G083600--Sobic010G264200 Sobic006G083600--Sobic007G024700 Sobic006G083600--Sobic003G155900 Sobic002G262900 Sobic002G262900 Sobic006G083600--Sobic002G262900 Sobic006G083600--Sobic001G124200 Sobic004G113400 Sobic004G113400 Sobic006G083600--Sobic004G113400
Octagon: transcription factors


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