Gene annotation
Transcriptome id Sobic.001G108900.1
Synonym Sb01g009710
Functional annotation expressed protein
UniProt C5WM43
Pfam -
Panther DB PTHR31060:SF6 PTHR31060
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G63850 : BTB/POZ domain-containing protein
RAP-DB (Rice) LOC_Os03g51380.1 : expressed protein
MaizeGDB (Corn) Zm00025a016913 , Zm00025a007948
Brachypodium KQK13463 , PNT74214
Barley -
Wheat TraesCS4D02G054600 , TraesCS4B02G054500 , TraesCS4A02G260100
Populus -


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cDNA sequences
Sobic.001G108900


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G222900 RNA recognition motif containing protein, putative, expressed K14411: RNA-binding protein Musashi
2 Sobic.007G117100 tentative name(PubMedID : 31536532)@histone-like transcription factor and archaeal histone, putative, expressed -
3 Sobic.003G140900 OsFBL33 - F-box domain and LRR containing protein, expressed -
4 Sobic.001G294700 Trihelix Family(PubMedID : 24864043)@transcription factor like protein, putative, expressed -
5 Sobic.002G106900 OsFBLD5 - F-box, LRR and FBD domain containing protein, expressed -
6 Sobic.004G017950 - -
7 Sobic.001G309100 zinc knuckle domain containing protein, expressed K09250: cellular nucleic acid-binding protein
8 Sobic.004G246700 zinc finger family protein, putative, expressed -
9 Sobic.001G426900 coronatine-insensitive protein, putative, expressed K13463: coronatine-insensitive protein 1
10 Sobic.002G280600 hydroxyproline-rich glycoprotein family protein, putative, expressed -
11 Sobic.005G046900 expressed protein K08331: autophagy-related protein 13
12 Sobic.002G329300 basic helix-loop-helix DND-binding domain containing protein, expressed -
13 Sobic.002G309800 casein kinase II subunit beta-4, putative, expressed K03115: casein kinase II subunit beta
14 Sobic.010G000700 zinc finger, C3HC4 type domain containing protein, expressed K11982: E3 ubiquitin-protein ligase RNF115/126
15 Sobic.003G054200 thioredoxin, putative, expressed K03671: thioredoxin 1
16 Sobic.001G038100 protein kinase PKN/PRK1, effector, putative, expressed -
17 Sobic.002G089900 OsFBX237 - F-box domain containing protein, expressed -
18 Sobic.002G095700 C2-BTB1 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with C2 subfamily conserved sequence, expressed K10523: speckle-type POZ protein
19 Sobic.002G122600 ankyrin repeat domain containing protein, expressed -
20 Sobic.007G174300 carrier, putative, expressed -


Gene co-expression network
sample Sobic001G108900 Sobic001G108900 Sobic001G222900 Sobic001G222900 Sobic001G108900--Sobic001G222900 Sobic007G117100 Sobic007G117100 Sobic001G108900--Sobic007G117100 Sobic003G140900 Sobic003G140900 Sobic001G108900--Sobic003G140900 Sobic001G294700 Sobic001G294700 Sobic001G108900--Sobic001G294700 Sobic002G106900 Sobic002G106900 Sobic001G108900--Sobic002G106900 Sobic004G017950 Sobic004G017950 Sobic001G108900--Sobic004G017950 Sobic001G309100 Sobic001G309100 Sobic001G108900--Sobic001G309100 Sobic004G246700 Sobic004G246700 Sobic001G108900--Sobic004G246700 Sobic001G426900 Sobic001G426900 Sobic001G108900--Sobic001G426900 Sobic001G222900--Sobic001G108900 Sobic003G123000 Sobic003G123000 Sobic001G222900--Sobic003G123000 Sobic005G007700 Sobic005G007700 Sobic001G222900--Sobic005G007700 Sobic001G222900--Sobic004G246700 Sobic005G079800 Sobic005G079800 Sobic001G222900--Sobic005G079800 Sobic008G165100 Sobic008G165100 Sobic001G222900--Sobic008G165100 Sobic002G309800 Sobic002G309800 Sobic001G222900--Sobic002G309800 Sobic002G224700 Sobic002G224700 Sobic001G222900--Sobic002G224700 Sobic004G095300 Sobic004G095300 Sobic001G222900--Sobic004G095300 Sobic001G038100 Sobic001G038100 Sobic007G117100--Sobic001G038100 Sobic003G433500 Sobic003G433500 Sobic007G117100--Sobic003G433500 Sobic003G132700 Sobic003G132700 Sobic007G117100--Sobic003G132700 Sobic006G120800 Sobic006G120800 Sobic007G117100--Sobic006G120800 Sobic001G507400 Sobic001G507400 Sobic007G117100--Sobic001G507400 Sobic007G117100--Sobic001G309100 Sobic003G354100 Sobic003G354100 Sobic007G117100--Sobic003G354100 Sobic002G014700 Sobic002G014700 Sobic007G117100--Sobic002G014700 Sobic002G089900 Sobic002G089900 Sobic007G117100--Sobic002G089900 Sobic003G343600 Sobic003G343600 Sobic003G140900--Sobic003G343600 Sobic002G223300 Sobic002G223300 Sobic003G140900--Sobic002G223300 Sobic003G140900--Sobic002G014700 Sobic003G140900--Sobic001G108900 Sobic003G140900--Sobic002G089900 Sobic003G140900--Sobic007G117100 Sobic003G140900--Sobic003G354100 Sobic003G140900--Sobic003G132700 Sobic004G285000 Sobic004G285000 Sobic003G140900--Sobic004G285000 Sobic003G361500 Sobic003G361500 Sobic001G294700--Sobic003G361500 Sobic001G294700--Sobic001G108900 Sobic009G252800 Sobic009G252800 Sobic001G294700--Sobic009G252800 Sobic008G046600 Sobic008G046600 Sobic001G294700--Sobic008G046600 Sobic003G317200 Sobic003G317200 Sobic001G294700--Sobic003G317200 Sobic010G055500 Sobic010G055500 Sobic001G294700--Sobic010G055500 Sobic001G350501 Sobic001G350501 Sobic001G294700--Sobic001G350501 Sobic008G142700 Sobic008G142700 Sobic001G294700--Sobic008G142700 Sobic003G429700 Sobic003G429700 Sobic001G294700--Sobic003G429700 Sobic001G252500 Sobic001G252500 Sobic002G106900--Sobic001G252500 Sobic002G106900--Sobic008G165100 Sobic002G018600 Sobic002G018600 Sobic002G106900--Sobic002G018600 Sobic003G442000 Sobic003G442000 Sobic002G106900--Sobic003G442000 Sobic010G000700 Sobic010G000700 Sobic002G106900--Sobic010G000700 Sobic002G151600 Sobic002G151600 Sobic002G106900--Sobic002G151600 Sobic005G015900 Sobic005G015900 Sobic002G106900--Sobic005G015900 Sobic002G106900--Sobic001G108900 Sobic008G073000 Sobic008G073000 Sobic002G106900--Sobic008G073000 Sobic004G017950--Sobic001G108900 Sobic004G017950--Sobic001G222900 Sobic004G017950--Sobic003G343600 Sobic007G197400 Sobic007G197400 Sobic004G017950--Sobic007G197400 Sobic003G311000 Sobic003G311000 Sobic004G017950--Sobic003G311000 Sobic001G230500 Sobic001G230500 Sobic004G017950--Sobic001G230500 Sobic007G050300 Sobic007G050300 Sobic004G017950--Sobic007G050300 Sobic002G280600 Sobic002G280600 Sobic004G017950--Sobic002G280600 Sobic003G061000 Sobic003G061000 Sobic004G017950--Sobic003G061000 Sobic001G309100--Sobic001G038100 Sobic003G024800 Sobic003G024800 Sobic001G309100--Sobic003G024800 Sobic003G101300 Sobic003G101300 Sobic001G309100--Sobic003G101300 Sobic003G189900 Sobic003G189900 Sobic001G309100--Sobic003G189900 Sobic001G390500 Sobic001G390500 Sobic001G309100--Sobic001G390500 Sobic010G071200 Sobic010G071200 Sobic001G309100--Sobic010G071200 Sobic003G437500 Sobic003G437500 Sobic001G309100--Sobic003G437500 Sobic001G309100--Sobic001G350501 Sobic001G309100--Sobic007G117100 Sobic004G349900 Sobic004G349900 Sobic004G246700--Sobic004G349900 Sobic002G365100 Sobic002G365100 Sobic004G246700--Sobic002G365100 Sobic002G259800 Sobic002G259800 Sobic004G246700--Sobic002G259800 Sobic008G127400 Sobic008G127400 Sobic004G246700--Sobic008G127400 Sobic003G241200 Sobic003G241200 Sobic004G246700--Sobic003G241200 Sobic010G202600 Sobic010G202600 Sobic004G246700--Sobic010G202600 Sobic004G096500 Sobic004G096500 Sobic004G246700--Sobic004G096500 Sobic002G320500 Sobic002G320500 Sobic004G246700--Sobic002G320500 Sobic002G034600 Sobic002G034600 Sobic004G246700--Sobic002G034600 Sobic001G356500 Sobic001G356500 Sobic001G426900--Sobic001G356500 Sobic001G206100 Sobic001G206100 Sobic001G426900--Sobic001G206100 Sobic001G426900--Sobic002G320500 Sobic005G021500 Sobic005G021500 Sobic001G426900--Sobic005G021500 Sobic001G426900--Sobic008G073000 Sobic001G228700 Sobic001G228700 Sobic001G426900--Sobic001G228700 Sobic009G000500 Sobic009G000500 Sobic001G426900--Sobic009G000500 Sobic010G194700 Sobic010G194700 Sobic001G426900--Sobic010G194700 Sobic002G165800 Sobic002G165800 Sobic001G426900--Sobic002G165800
Octagon: transcription factors


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