Gene annotation
Transcriptome id Sobic.001G294700.1
Synonym SbTri26, Sb01g028790
Functional annotation Trihelix Family (PubMedID : 24864043)
transcription factor like protein, putative, expressed
UniProt C5WRH0
Pfam PF13837
Panther DB PTHR31307 PTHR31307:SF3
NCBI CDD KOG4282; Transcription factor GT-2 and related proteins, contains trihelix DNA-binding/SANT domain
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G44730 : Alcohol dehydrogenase transcription factor Myb/SANT-like family protein
RAP-DB (Rice) LOC_Os10g41460.1 : transcription factor like protein, putative, expressed
MaizeGDB (Corn) Zm00025a051914 , Zm00025a003409
Brachypodium KQJ97842
Barley HORVU1Hr1G055420.2 , HORVU1Hr1G055420.1
Wheat -
Populus PNT44380


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G361500 zinc finger family protein, putative, expressed -
2 Sobic.001G108900 expressed protein -
3 Sobic.009G252800 expressed protein -
4 Sobic.008G046600 bZIP transcription factor domain containing protein, expressed -
5 Sobic.003G317200 vacuolar protein sorting-associated protein 28 homolog 2, putative, expressed K12184: ESCRT-I complex subunit VPS28
6 Sobic.010G055500 RNA-binding motif protein, putative, expressed K12872: RBM22, pre-mRNA-splicing factor RBM22/SLT11
7 Sobic.001G350501 - K11253: histone H3
8 Sobic.008G142700 expressed protein -
9 Sobic.003G429700 zinc finger, C3HC4 type domain containing protein, expressed -
10 Sobic.001G309100 zinc knuckle domain containing protein, expressed K09250: cellular nucleic acid-binding protein
11 Sobic.010G071200 "Belonging to the Sdw3 locus, Sbi_sdw3"(PubMedID : 20464438)@ubiquitin-conjugating enzyme, putative, expressed K04554: UBE2J2, NCUBE2, ubiquitin-conjugating enzyme E2 J2
12 Sobic.006G109300 protein binding protein, putative, expressed -
13 Sobic.007G097900 OsFBL45 - F-box domain and LRR containing protein, expressed -
14 Sobic.001G038100 protein kinase PKN/PRK1, effector, putative, expressed -
15 Sobic.004G059000 serine/threonine-protein kinase HT1, putative, expressed -
16 Sobic.004G001400 SKP1-like protein 1B, putative, expressed K03094: SKP1, S-phase kinase-associated protein 1
17 Sobic.006G002500 basic salivary proline-rich protein 2 precursor, putative, expressed -
18 Sobic.001G512900 heat shock protein DnaJ, putative, expressed K09537: DnaJ homolog subfamily C member 17
19 Sobic.002G280600 hydroxyproline-rich glycoprotein family protein, putative, expressed -
20 Sobic.006G207500 expressed protein -


Gene co-expression network
sample Sobic001G294700 Sobic001G294700 Sobic003G361500 Sobic003G361500 Sobic001G294700--Sobic003G361500 Sobic001G108900 Sobic001G108900 Sobic001G294700--Sobic001G108900 Sobic009G252800 Sobic009G252800 Sobic001G294700--Sobic009G252800 Sobic008G046600 Sobic008G046600 Sobic001G294700--Sobic008G046600 Sobic003G317200 Sobic003G317200 Sobic001G294700--Sobic003G317200 Sobic010G055500 Sobic010G055500 Sobic001G294700--Sobic010G055500 Sobic001G350501 Sobic001G350501 Sobic001G294700--Sobic001G350501 Sobic008G142700 Sobic008G142700 Sobic001G294700--Sobic008G142700 Sobic003G429700 Sobic003G429700 Sobic001G294700--Sobic003G429700 Sobic003G361500--Sobic008G046600 Sobic006G109300 Sobic006G109300 Sobic003G361500--Sobic006G109300 Sobic003G361500--Sobic001G294700 Sobic004G319300 Sobic004G319300 Sobic003G361500--Sobic004G319300 Sobic003G361500--Sobic009G252800 Sobic004G059000 Sobic004G059000 Sobic003G361500--Sobic004G059000 Sobic007G152101 Sobic007G152101 Sobic003G361500--Sobic007G152101 Sobic003G361500--Sobic008G142700 Sobic006G207500 Sobic006G207500 Sobic003G361500--Sobic006G207500 Sobic001G222900 Sobic001G222900 Sobic001G108900--Sobic001G222900 Sobic007G117100 Sobic007G117100 Sobic001G108900--Sobic007G117100 Sobic003G140900 Sobic003G140900 Sobic001G108900--Sobic003G140900 Sobic001G108900--Sobic001G294700 Sobic002G106900 Sobic002G106900 Sobic001G108900--Sobic002G106900 Sobic004G017950 Sobic004G017950 Sobic001G108900--Sobic004G017950 Sobic001G309100 Sobic001G309100 Sobic001G108900--Sobic001G309100 Sobic004G246700 Sobic004G246700 Sobic001G108900--Sobic004G246700 Sobic001G426900 Sobic001G426900 Sobic001G108900--Sobic001G426900 Sobic009G252800--Sobic008G142700 Sobic007G038800 Sobic007G038800 Sobic009G252800--Sobic007G038800 Sobic006G002500 Sobic006G002500 Sobic009G252800--Sobic006G002500 Sobic010G071200 Sobic010G071200 Sobic009G252800--Sobic010G071200 Sobic009G171700 Sobic009G171700 Sobic009G252800--Sobic009G171700 Sobic009G252800--Sobic003G361500 Sobic001G136900 Sobic001G136900 Sobic009G252800--Sobic001G136900 Sobic004G316900 Sobic004G316900 Sobic009G252800--Sobic004G316900 Sobic009G252800--Sobic010G055500 Sobic008G046600--Sobic003G361500 Sobic002G180000 Sobic002G180000 Sobic008G046600--Sobic002G180000 Sobic001G038100 Sobic001G038100 Sobic008G046600--Sobic001G038100 Sobic001G131800 Sobic001G131800 Sobic008G046600--Sobic001G131800 Sobic008G046600--Sobic001G309100 Sobic008G046600--Sobic001G294700 Sobic003G405700 Sobic003G405700 Sobic008G046600--Sobic003G405700 Sobic010G269600 Sobic010G269600 Sobic008G046600--Sobic010G269600 Sobic001G512900 Sobic001G512900 Sobic008G046600--Sobic001G512900 Sobic003G317200--Sobic010G055500 Sobic003G317200--Sobic010G071200 Sobic003G317200--Sobic006G109300 Sobic003G317200--Sobic008G142700 Sobic001G206000 Sobic001G206000 Sobic003G317200--Sobic001G206000 Sobic001G441600 Sobic001G441600 Sobic003G317200--Sobic001G441600 Sobic004G231400 Sobic004G231400 Sobic003G317200--Sobic004G231400 Sobic001G149700 Sobic001G149700 Sobic003G317200--Sobic001G149700 Sobic001G138300 Sobic001G138300 Sobic003G317200--Sobic001G138300 Sobic010G055500--Sobic010G071200 Sobic004G263900 Sobic004G263900 Sobic010G055500--Sobic004G263900 Sobic010G055500--Sobic001G149700 Sobic010G055500--Sobic004G231400 Sobic010G055500--Sobic001G512900 Sobic010G055500--Sobic006G109300 Sobic001G390500 Sobic001G390500 Sobic010G055500--Sobic001G390500 Sobic010G055500--Sobic008G142700 Sobic004G150400 Sobic004G150400 Sobic010G055500--Sobic004G150400 Sobic003G024800 Sobic003G024800 Sobic001G350501--Sobic003G024800 Sobic004G349100 Sobic004G349100 Sobic001G350501--Sobic004G349100 Sobic001G350501--Sobic001G309100 Sobic010G193800 Sobic010G193800 Sobic001G350501--Sobic010G193800 Sobic001G350501--Sobic008G142700 Sobic009G034400 Sobic009G034400 Sobic001G350501--Sobic009G034400 Sobic003G420700 Sobic003G420700 Sobic001G350501--Sobic003G420700 Sobic009G036900 Sobic009G036900 Sobic001G350501--Sobic009G036900 Sobic007G063200 Sobic007G063200 Sobic001G350501--Sobic007G063200 Sobic008G142700--Sobic010G071200 Sobic008G142700--Sobic001G512900 Sobic008G142700--Sobic010G055500 Sobic008G142700--Sobic001G149700 Sobic008G142700--Sobic007G063200 Sobic003G350600 Sobic003G350600 Sobic008G142700--Sobic003G350600 Sobic008G142700--Sobic006G109300 Sobic009G246950 Sobic009G246950 Sobic008G142700--Sobic009G246950 Sobic001G478300 Sobic001G478300 Sobic008G142700--Sobic001G478300 Sobic004G248800 Sobic004G248800 Sobic003G429700--Sobic004G248800 Sobic003G403400 Sobic003G403400 Sobic003G429700--Sobic003G403400 Sobic003G429700--Sobic004G316900 Sobic001G094500 Sobic001G094500 Sobic003G429700--Sobic001G094500 Sobic004G265700 Sobic004G265700 Sobic003G429700--Sobic004G265700 Sobic003G429700--Sobic007G038800 Sobic003G429700--Sobic006G207500 Sobic004G012800 Sobic004G012800 Sobic003G429700--Sobic004G012800 Sobic002G256300 Sobic002G256300 Sobic003G429700--Sobic002G256300
Octagon: transcription factors


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