Gene annotation
Transcriptome id Sobic.008G046600.1
Synonym VIP1, SUE3, Sb08g003940
Functional annotation bZIP transcription factor domain containing protein, expressed
UniProt C5YS97
Pfam PF00170
Panther DB PTHR13690 PTHR13690:SF86
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0006355; regulation of transcription, DNA-templated GO:0003700DNA-binding transcription factor activity


Orthologs (automatic annotation)
TAIR AT1G43700 : VIRE2-interacting protein 1
RAP-DB (Rice) LOC_Os12g06520.1 : bZIP transcription factor domain containing protein, expressed
MaizeGDB (Corn) Zm00025a053985 , Zm00025a034154 , Zm00025a025788 , Zm00025a012924
Brachypodium KQJ92141
Barley HORVU5Hr1G039870.6 , HORVU5Hr1G039870.7 , HORVU5Hr1G039870.4 , HORVU5Hr1G039870.5 , HORVU5Hr1G039870.2 , HORVU5Hr1G039870.3 , HORVU5Hr1G039870.1 , HORVU5Hr1G039860.1 , HORVU5Hr1G039860.2
Wheat TraesCS5A02G124600 , TraesCS5B02G124200
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G361500 zinc finger family protein, putative, expressed -
2 Sobic.002G180000 protein kinase domain containing protein, expressed -
3 Sobic.001G038100 protein kinase PKN/PRK1, effector, putative, expressed -
4 Sobic.001G131800 expressed protein K15186: ELL-associated factor
5 Sobic.001G309100 zinc knuckle domain containing protein, expressed K09250: cellular nucleic acid-binding protein
6 Sobic.001G294700 Trihelix Family(PubMedID : 24864043)@transcription factor like protein, putative, expressed -
7 Sobic.003G405700 exo70 exocyst complex subunit domain containing protein, expressed K07195: EXOC7, exocyst complex component 7
8 Sobic.010G269600 RNA recognition motif containing protein, expressed K12897: transformer-2 protein
9 Sobic.001G512900 heat shock protein DnaJ, putative, expressed K09537: DnaJ homolog subfamily C member 17
10 Sobic.003G317200 vacuolar protein sorting-associated protein 28 homolog 2, putative, expressed K12184: ESCRT-I complex subunit VPS28
11 Sobic.009G160000 basic helix-loop-helix DND-binding domain containing protein, expressed -
12 Sobic.009G050700 importin subunit alpha, putative, expressed -
13 Sobic.002G329300 basic helix-loop-helix DND-binding domain containing protein, expressed -
14 Sobic.005G010500 expressed protein -
15 Sobic.005G229000 Putative splicing factor(PubMedID : 24356560)@RNA recognition motif containing protein, expressed K12900: FUS-interacting serine-arginine-rich protein 1
16 Sobic.006G109300 protein binding protein, putative, expressed -
17 Sobic.008G192000 yippee zinc-binding protein, putative, expressed -
18 Sobic.004G260400 expressed protein K07018: uncharacterized protein
19 Sobic.001G063100 DUF593 domain containing protein, expressed -
20 Sobic.001G080000 expressed protein -


Gene co-expression network
sample Sobic008G046600 Sobic008G046600 Sobic003G361500 Sobic003G361500 Sobic008G046600--Sobic003G361500 Sobic002G180000 Sobic002G180000 Sobic008G046600--Sobic002G180000 Sobic001G038100 Sobic001G038100 Sobic008G046600--Sobic001G038100 Sobic001G131800 Sobic001G131800 Sobic008G046600--Sobic001G131800 Sobic001G309100 Sobic001G309100 Sobic008G046600--Sobic001G309100 Sobic001G294700 Sobic001G294700 Sobic008G046600--Sobic001G294700 Sobic003G405700 Sobic003G405700 Sobic008G046600--Sobic003G405700 Sobic010G269600 Sobic010G269600 Sobic008G046600--Sobic010G269600 Sobic001G512900 Sobic001G512900 Sobic008G046600--Sobic001G512900 Sobic003G361500--Sobic008G046600 Sobic006G109300 Sobic006G109300 Sobic003G361500--Sobic006G109300 Sobic003G361500--Sobic001G294700 Sobic004G319300 Sobic004G319300 Sobic003G361500--Sobic004G319300 Sobic009G252800 Sobic009G252800 Sobic003G361500--Sobic009G252800 Sobic004G059000 Sobic004G059000 Sobic003G361500--Sobic004G059000 Sobic007G152101 Sobic007G152101 Sobic003G361500--Sobic007G152101 Sobic008G142700 Sobic008G142700 Sobic003G361500--Sobic008G142700 Sobic006G207500 Sobic006G207500 Sobic003G361500--Sobic006G207500 Sobic007G111100 Sobic007G111100 Sobic002G180000--Sobic007G111100 Sobic001G143500 Sobic001G143500 Sobic002G180000--Sobic001G143500 Sobic008G139700 Sobic008G139700 Sobic002G180000--Sobic008G139700 Sobic006G065800 Sobic006G065800 Sobic002G180000--Sobic006G065800 Sobic006G267300 Sobic006G267300 Sobic002G180000--Sobic006G267300 Sobic002G180000--Sobic001G131800 Sobic002G272600 Sobic002G272600 Sobic002G180000--Sobic002G272600 Sobic001G080000 Sobic001G080000 Sobic002G180000--Sobic001G080000 Sobic002G180000--Sobic003G405700 Sobic002G204000 Sobic002G204000 Sobic001G038100--Sobic002G204000 Sobic001G038100--Sobic001G309100 Sobic001G507400 Sobic001G507400 Sobic001G038100--Sobic001G507400 Sobic006G120800 Sobic006G120800 Sobic001G038100--Sobic006G120800 Sobic007G117100 Sobic007G117100 Sobic001G038100--Sobic007G117100 Sobic003G420700 Sobic003G420700 Sobic001G038100--Sobic003G420700 Sobic004G186000 Sobic004G186000 Sobic001G038100--Sobic004G186000 Sobic006G261100 Sobic006G261100 Sobic001G038100--Sobic006G261100 Sobic004G260400 Sobic004G260400 Sobic001G038100--Sobic004G260400 Sobic008G174300 Sobic008G174300 Sobic001G131800--Sobic008G174300 Sobic003G081000 Sobic003G081000 Sobic001G131800--Sobic003G081000 Sobic010G202600 Sobic010G202600 Sobic001G131800--Sobic010G202600 Sobic010G033400 Sobic010G033400 Sobic001G131800--Sobic010G033400 Sobic009G198100 Sobic009G198100 Sobic001G131800--Sobic009G198100 Sobic007G132400 Sobic007G132400 Sobic001G131800--Sobic007G132400 Sobic001G107500 Sobic001G107500 Sobic001G131800--Sobic001G107500 Sobic001G131800--Sobic007G111100 Sobic003G359300 Sobic003G359300 Sobic001G131800--Sobic003G359300 Sobic001G309100--Sobic001G038100 Sobic003G024800 Sobic003G024800 Sobic001G309100--Sobic003G024800 Sobic003G101300 Sobic003G101300 Sobic001G309100--Sobic003G101300 Sobic003G189900 Sobic003G189900 Sobic001G309100--Sobic003G189900 Sobic001G390500 Sobic001G390500 Sobic001G309100--Sobic001G390500 Sobic010G071200 Sobic010G071200 Sobic001G309100--Sobic010G071200 Sobic003G437500 Sobic003G437500 Sobic001G309100--Sobic003G437500 Sobic001G350501 Sobic001G350501 Sobic001G309100--Sobic001G350501 Sobic001G309100--Sobic007G117100 Sobic001G294700--Sobic003G361500 Sobic001G108900 Sobic001G108900 Sobic001G294700--Sobic001G108900 Sobic001G294700--Sobic009G252800 Sobic001G294700--Sobic008G046600 Sobic003G317200 Sobic003G317200 Sobic001G294700--Sobic003G317200 Sobic010G055500 Sobic010G055500 Sobic001G294700--Sobic010G055500 Sobic001G294700--Sobic001G350501 Sobic001G294700--Sobic008G142700 Sobic003G429700 Sobic003G429700 Sobic001G294700--Sobic003G429700 Sobic004G305600 Sobic004G305600 Sobic003G405700--Sobic004G305600 Sobic003G405700--Sobic001G080000 Sobic006G183000 Sobic006G183000 Sobic003G405700--Sobic006G183000 Sobic002G129000 Sobic002G129000 Sobic003G405700--Sobic002G129000 Sobic010G105600 Sobic010G105600 Sobic003G405700--Sobic010G105600 Sobic009G050700 Sobic009G050700 Sobic003G405700--Sobic009G050700 Sobic001G136900 Sobic001G136900 Sobic003G405700--Sobic001G136900 Sobic003G405700--Sobic004G059000 Sobic003G405700--Sobic002G272600 Sobic005G229000 Sobic005G229000 Sobic010G269600--Sobic005G229000 Sobic010G000700 Sobic010G000700 Sobic010G269600--Sobic010G000700 Sobic003G074000 Sobic003G074000 Sobic010G269600--Sobic003G074000 Sobic002G045400 Sobic002G045400 Sobic010G269600--Sobic002G045400 Sobic003G248500 Sobic003G248500 Sobic010G269600--Sobic003G248500 Sobic010G269600--Sobic003G359300 Sobic010G269600--Sobic010G202600 Sobic010G174800 Sobic010G174800 Sobic010G269600--Sobic010G174800 Sobic002G362300 Sobic002G362300 Sobic010G269600--Sobic002G362300 Sobic001G512900--Sobic010G071200 Sobic001G512900--Sobic010G055500 Sobic001G512900--Sobic008G142700 Sobic001G512900--Sobic008G174300 Sobic001G083600 Sobic001G083600 Sobic001G512900--Sobic001G083600 Sobic001G512900--Sobic001G390500 Sobic001G149700 Sobic001G149700 Sobic001G512900--Sobic001G149700 Sobic003G127400 Sobic003G127400 Sobic001G512900--Sobic003G127400 Sobic009G246950 Sobic009G246950 Sobic001G512900--Sobic009G246950
Octagon: transcription factors


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