Gene annotation
Transcriptome id Sobic.002G180000.1
Synonym Sb02g022880
Functional annotation protein kinase domain containing protein, expressed
UniProt C5XAN4
Pfam PF07714
Panther DB PTHR27001 PTHR27001:SF197
NCBI CDD KOG1187; Serine/threonine protein kinase
KEGG Orthology -
Gene Ontology GO:0006468; protein phosphorylation GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT5G15080 : Protein kinase superfamily protein
RAP-DB (Rice) LOC_Os09g19700.1 : protein kinase domain containing protein, expressed
MaizeGDB (Corn) Zm00025a013807 , Zm00025a046659
Brachypodium KQJ89945
Barley HORVU6Hr1G003940.23 , HORVU6Hr1G003940.22 , HORVU6Hr1G003940.21 , HORVU6Hr1G003940.20 , HORVU6Hr1G003940.26 , HORVU6Hr1G003940.25 , HORVU5Hr1G056920.5 , HORVU5Hr1G056920.3 , HORVU5Hr1G056920.2 , HORVU5Hr1G056920.1 , HORVU5Hr1G056920.9 , HORVU5Hr1G056920.8 , HORVU5Hr1G056920.7 , HORVU5Hr1G056920.6 , HORVU5Hr1G056920.4 , HORVU6Hr1G003940.12 , HORVU6Hr1G003940.13 , HORVU6Hr1G003940.10 , HORVU6Hr1G003940.11 , HORVU6Hr1G003940.16 , HORVU6Hr1G003940.17 , HORVU6Hr1G003940.14 , HORVU6Hr1G003940.15 , HORVU6Hr1G003940.18 , HORVU6Hr1G003940.19 , HORVU6Hr1G003940.8 , HORVU6Hr1G003940.1 , HORVU6Hr1G003940.2 , HORVU6Hr1G003940.3 , HORVU6Hr1G003940.4 , HORVU6Hr1G003940.5 , HORVU6Hr1G003940.6 , HORVU6Hr1G003940.7
Wheat TraesCS4A02G005100 , TraesCS4A02G005100 , TraesCS4A02G005100 , TraesCS4A02G005100 , TraesCS5D02G195800 , TraesCS5D02G195800 , TraesCS6D02G069500 , TraesCS5B02G188700 , TraesCS5B02G188700 , TraesCS6B02G095800 , TraesCS5A02G193300 , TraesCS5A02G193300
Populus PNS94113 , PNT40864 , PNT54837 , PNT54838 , PNT54839 , PNT54840 , PNT30133 , PNT30134


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cDNA sequences
Sobic.002G180000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G111100 PSF3 - Putative GINS complex subunit, expressed K10734: GINS complex subunit 3
2 Sobic.001G143500 pleckstrin homology domain-containing protein, putative, expressed -
3 Sobic.008G139700 bromodomain associated family protein, expressed K14649: transcription initiation factor TFIID subunit 8
4 Sobic.006G065800 Trihelix Family(PubMedID : 24864043)@amino acid kinase, putative, expressed -
5 Sobic.006G267300 expressed protein -
6 Sobic.001G131800 expressed protein K15186: ELL-associated factor
7 Sobic.002G272600 TBC domain containing protein, expressed -
8 Sobic.001G080000 expressed protein -
9 Sobic.003G405700 exo70 exocyst complex subunit domain containing protein, expressed K07195: EXOC7, exocyst complex component 7
10 Sobic.003G081000 transcription factor, putative, expressed K14431: transcription factor TGA
11 Sobic.001G469800 transcription initiation factor IIB, putative, expressed K03124: TFIIB, GTF2B, SUA7, transcription initiation factor TFIIB
12 Sobic.007G118200 RNA recognition motif containing protein, expressed K12897: transformer-2 protein
13 Sobic.010G202600 zinc finger, C3HC4 type domain containing protein, expressed K10661: MARCH6, E3 ubiquitin-protein ligase MARCH6
14 Sobic.007G191700 expressed protein K08507: unconventional SNARE in the endoplasmic reticulum protein 1
15 Sobic.009G198100 expressed protein -
16 Sobic.001G053800 expressed protein -
17 Sobic.001G395100 - K12835: DDX42, ATP-dependent RNA helicase DDX42
18 Sobic.007G027700 expressed protein -
19 Sobic.008G092300 zinc finger C-x8-C-x5-C-x3-H type family protein, expressed -
20 Sobic.002G126500 RNA recognition motif containing protein, expressed -


Gene co-expression network
sample Sobic002G180000 Sobic002G180000 Sobic007G111100 Sobic007G111100 Sobic002G180000--Sobic007G111100 Sobic001G143500 Sobic001G143500 Sobic002G180000--Sobic001G143500 Sobic008G139700 Sobic008G139700 Sobic002G180000--Sobic008G139700 Sobic006G065800 Sobic006G065800 Sobic002G180000--Sobic006G065800 Sobic006G267300 Sobic006G267300 Sobic002G180000--Sobic006G267300 Sobic001G131800 Sobic001G131800 Sobic002G180000--Sobic001G131800 Sobic002G272600 Sobic002G272600 Sobic002G180000--Sobic002G272600 Sobic001G080000 Sobic001G080000 Sobic002G180000--Sobic001G080000 Sobic003G405700 Sobic003G405700 Sobic002G180000--Sobic003G405700 Sobic010G202600 Sobic010G202600 Sobic007G111100--Sobic010G202600 Sobic002G262700 Sobic002G262700 Sobic007G111100--Sobic002G262700 Sobic007G111100--Sobic006G267300 Sobic007G111100--Sobic001G143500 Sobic001G390500 Sobic001G390500 Sobic007G111100--Sobic001G390500 Sobic004G283000 Sobic004G283000 Sobic007G111100--Sobic004G283000 Sobic004G068500 Sobic004G068500 Sobic007G111100--Sobic004G068500 Sobic007G111100--Sobic001G131800 Sobic003G205501 Sobic003G205501 Sobic007G111100--Sobic003G205501 Sobic006G252700 Sobic006G252700 Sobic001G143500--Sobic006G252700 Sobic001G143500--Sobic007G111100 Sobic002G313500 Sobic002G313500 Sobic001G143500--Sobic002G313500 Sobic004G350100 Sobic004G350100 Sobic001G143500--Sobic004G350100 Sobic003G401100 Sobic003G401100 Sobic001G143500--Sobic003G401100 Sobic003G439800 Sobic003G439800 Sobic001G143500--Sobic003G439800 Sobic001G466700 Sobic001G466700 Sobic001G143500--Sobic001G466700 Sobic006G278700 Sobic006G278700 Sobic001G143500--Sobic006G278700 Sobic001G143500--Sobic006G267300 Sobic008G139700--Sobic002G313500 Sobic010G017800 Sobic010G017800 Sobic008G139700--Sobic010G017800 Sobic008G139700--Sobic001G080000 Sobic008G139700--Sobic001G143500 Sobic008G139700--Sobic002G180000 Sobic003G045400 Sobic003G045400 Sobic008G139700--Sobic003G045400 Sobic007G205000 Sobic007G205000 Sobic008G139700--Sobic007G205000 Sobic008G139700--Sobic006G267300 Sobic010G105600 Sobic010G105600 Sobic008G139700--Sobic010G105600 Sobic008G127400 Sobic008G127400 Sobic006G065800--Sobic008G127400 Sobic001G469800 Sobic001G469800 Sobic006G065800--Sobic001G469800 Sobic006G065800--Sobic007G111100 Sobic006G065800--Sobic002G180000 Sobic006G065800--Sobic006G267300 Sobic002G388200 Sobic002G388200 Sobic006G065800--Sobic002G388200 Sobic007G009400 Sobic007G009400 Sobic006G065800--Sobic007G009400 Sobic007G027700 Sobic007G027700 Sobic006G065800--Sobic007G027700 Sobic002G224700 Sobic002G224700 Sobic006G065800--Sobic002G224700 Sobic006G267300--Sobic007G111100 Sobic009G257800 Sobic009G257800 Sobic006G267300--Sobic009G257800 Sobic006G267300--Sobic003G205501 Sobic001G408700 Sobic001G408700 Sobic006G267300--Sobic001G408700 Sobic009G195200 Sobic009G195200 Sobic006G267300--Sobic009G195200 Sobic007G118200 Sobic007G118200 Sobic006G267300--Sobic007G118200 Sobic006G267300--Sobic010G202600 Sobic003G433500 Sobic003G433500 Sobic006G267300--Sobic003G433500 Sobic006G267300--Sobic008G127400 Sobic008G174300 Sobic008G174300 Sobic001G131800--Sobic008G174300 Sobic003G081000 Sobic003G081000 Sobic001G131800--Sobic003G081000 Sobic001G131800--Sobic010G202600 Sobic010G033400 Sobic010G033400 Sobic001G131800--Sobic010G033400 Sobic009G198100 Sobic009G198100 Sobic001G131800--Sobic009G198100 Sobic007G132400 Sobic007G132400 Sobic001G131800--Sobic007G132400 Sobic001G107500 Sobic001G107500 Sobic001G131800--Sobic001G107500 Sobic001G131800--Sobic007G111100 Sobic003G359300 Sobic003G359300 Sobic001G131800--Sobic003G359300 Sobic001G061700 Sobic001G061700 Sobic002G272600--Sobic001G061700 Sobic002G272600--Sobic001G080000 Sobic002G272600--Sobic001G143500 Sobic002G272600--Sobic003G405700 Sobic002G272600--Sobic010G105600 Sobic002G272600--Sobic007G205000 Sobic003G038600 Sobic003G038600 Sobic002G272600--Sobic003G038600 Sobic003G350600 Sobic003G350600 Sobic002G272600--Sobic003G350600 Sobic010G219100 Sobic010G219100 Sobic002G272600--Sobic010G219100 Sobic001G080000--Sobic003G405700 Sobic001G080000--Sobic008G139700 Sobic001G080000--Sobic002G272600 Sobic001G080000--Sobic002G180000 Sobic001G080000--Sobic010G105600 Sobic001G080000--Sobic001G143500 Sobic001G010600 Sobic001G010600 Sobic001G080000--Sobic001G010600 Sobic001G080000--Sobic003G045400 Sobic001G080000--Sobic007G205000 Sobic004G305600 Sobic004G305600 Sobic003G405700--Sobic004G305600 Sobic003G405700--Sobic001G080000 Sobic006G183000 Sobic006G183000 Sobic003G405700--Sobic006G183000 Sobic002G129000 Sobic002G129000 Sobic003G405700--Sobic002G129000 Sobic003G405700--Sobic010G105600 Sobic009G050700 Sobic009G050700 Sobic003G405700--Sobic009G050700 Sobic001G136900 Sobic001G136900 Sobic003G405700--Sobic001G136900 Sobic004G059000 Sobic004G059000 Sobic003G405700--Sobic004G059000 Sobic003G405700--Sobic002G272600
Octagon: transcription factors


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