Gene annotation
Transcriptome id Sobic.009G160000.1
Synonym ILR3, Sb09g022280, bHLH105
Functional annotation basic helix-loop-helix DND-binding domain containing protein, expressed
UniProt C5YZ70
Pfam PF00010
Panther DB PTHR23042 PTHR23042:SF58
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G54680 : basic helix-loop-helix (bHLH) DNA-binding superfamily protein
RAP-DB (Rice) LOC_Os05g38140.1 : basic helix-loop-helix DND-binding domain containing protein, expressed
MaizeGDB (Corn) Zm00025a043883 , Zm00025a037187
Brachypodium KQK05947
Barley HORVU1Hr1G072810.1 , HORVU1Hr1G072810.3 , HORVU1Hr1G072810.2 , HORVU1Hr1G072810.4
Wheat TraesCS1B02G290500 , TraesCS1D02G280600 , TraesCS1A02G281300
Populus -


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cDNA sequences
Sobic.009G160000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G046600 bZIP transcription factor domain containing protein, expressed -
2 Sobic.009G252800 expressed protein -
3 Sobic.004G049100 OsFBLD1 - F-box, LRR and FBD domain containing protein, expressed -
4 Sobic.003G361500 zinc finger family protein, putative, expressed -
5 Sobic.010G071200 "Belonging to the Sdw3 locus, Sbi_sdw3"(PubMedID : 20464438)@ubiquitin-conjugating enzyme, putative, expressed K04554: UBE2J2, NCUBE2, ubiquitin-conjugating enzyme E2 J2
6 Sobic.009G100300 expressed protein -
7 Sobic.001G512900 heat shock protein DnaJ, putative, expressed K09537: DnaJ homolog subfamily C member 17
8 Sobic.004G231400 OsAPRL3 adenosine 5\'-phosphosulfate reductase-like OsAPRL3, expressed -
9 Sobic.007G026100 Divergent PAP2 family domain containing protein, expressed K09775: uncharacterized protein
10 Sobic.010G055500 RNA-binding motif protein, putative, expressed K12872: RBM22, pre-mRNA-splicing factor RBM22/SLT11
11 Sobic.007G152101 - K11982: E3 ubiquitin-protein ligase RNF115/126
12 Sobic.002G179500 holocarboxylase synthetase, putative, expressed -
13 Sobic.005G046100 bZIP transcription factor domain containing protein, expressed -
14 Sobic.001G136900 ubiquitin-conjugating enzyme E2 W, putative, expressed K10688: UBE2W, ubiquitin-conjugating enzyme E2 W
15 Sobic.003G127400 BSD domain-containing protein, putative, expressed -
16 Sobic.003G429700 zinc finger, C3HC4 type domain containing protein, expressed -
17 Sobic.004G079100 zinc finger A20 and AN1 domain-containing stress-associated protein, putative, expressed -
18 Sobic.007G126200 mitosis protein dim1, putative, expressed K12859: TXNL4A, U5 snRNP protein, DIM1 family
19 Sobic.010G067700 expressed protein -
20 Sobic.002G346900 pre-mRNA-splicing factor, putative, expressed K12817: PRPF18, pre-mRNA-splicing factor 18


Gene co-expression network
sample Sobic009G160000 Sobic009G160000 Sobic008G046600 Sobic008G046600 Sobic009G160000--Sobic008G046600 Sobic009G252800 Sobic009G252800 Sobic009G160000--Sobic009G252800 Sobic004G049100 Sobic004G049100 Sobic009G160000--Sobic004G049100 Sobic003G361500 Sobic003G361500 Sobic009G160000--Sobic003G361500 Sobic010G071200 Sobic010G071200 Sobic009G160000--Sobic010G071200 Sobic009G100300 Sobic009G100300 Sobic009G160000--Sobic009G100300 Sobic001G512900 Sobic001G512900 Sobic009G160000--Sobic001G512900 Sobic004G231400 Sobic004G231400 Sobic009G160000--Sobic004G231400 Sobic007G026100 Sobic007G026100 Sobic009G160000--Sobic007G026100 Sobic008G046600--Sobic003G361500 Sobic002G180000 Sobic002G180000 Sobic008G046600--Sobic002G180000 Sobic001G038100 Sobic001G038100 Sobic008G046600--Sobic001G038100 Sobic001G131800 Sobic001G131800 Sobic008G046600--Sobic001G131800 Sobic001G309100 Sobic001G309100 Sobic008G046600--Sobic001G309100 Sobic001G294700 Sobic001G294700 Sobic008G046600--Sobic001G294700 Sobic003G405700 Sobic003G405700 Sobic008G046600--Sobic003G405700 Sobic010G269600 Sobic010G269600 Sobic008G046600--Sobic010G269600 Sobic008G046600--Sobic001G512900 Sobic008G142700 Sobic008G142700 Sobic009G252800--Sobic008G142700 Sobic007G038800 Sobic007G038800 Sobic009G252800--Sobic007G038800 Sobic006G002500 Sobic006G002500 Sobic009G252800--Sobic006G002500 Sobic009G252800--Sobic010G071200 Sobic009G171700 Sobic009G171700 Sobic009G252800--Sobic009G171700 Sobic009G252800--Sobic003G361500 Sobic001G136900 Sobic001G136900 Sobic009G252800--Sobic001G136900 Sobic004G316900 Sobic004G316900 Sobic009G252800--Sobic004G316900 Sobic010G055500 Sobic010G055500 Sobic009G252800--Sobic010G055500 Sobic002G262600 Sobic002G262600 Sobic004G049100--Sobic002G262600 Sobic004G049100--Sobic004G231400 Sobic001G478300 Sobic001G478300 Sobic004G049100--Sobic001G478300 Sobic009G011700 Sobic009G011700 Sobic004G049100--Sobic009G011700 Sobic001G333200 Sobic001G333200 Sobic004G049100--Sobic001G333200 Sobic004G049100--Sobic010G055500 Sobic001G371300 Sobic001G371300 Sobic004G049100--Sobic001G371300 Sobic004G049100--Sobic010G071200 Sobic001G451000 Sobic001G451000 Sobic004G049100--Sobic001G451000 Sobic003G361500--Sobic008G046600 Sobic006G109300 Sobic006G109300 Sobic003G361500--Sobic006G109300 Sobic003G361500--Sobic001G294700 Sobic004G319300 Sobic004G319300 Sobic003G361500--Sobic004G319300 Sobic003G361500--Sobic009G252800 Sobic004G059000 Sobic004G059000 Sobic003G361500--Sobic004G059000 Sobic007G152101 Sobic007G152101 Sobic003G361500--Sobic007G152101 Sobic003G361500--Sobic008G142700 Sobic006G207500 Sobic006G207500 Sobic003G361500--Sobic006G207500 Sobic010G071200--Sobic010G055500 Sobic001G149700 Sobic001G149700 Sobic010G071200--Sobic001G149700 Sobic010G071200--Sobic004G231400 Sobic004G263900 Sobic004G263900 Sobic010G071200--Sobic004G263900 Sobic010G071200--Sobic008G142700 Sobic010G071200--Sobic001G512900 Sobic010G071200--Sobic001G478300 Sobic006G257900 Sobic006G257900 Sobic010G071200--Sobic006G257900 Sobic001G083600 Sobic001G083600 Sobic010G071200--Sobic001G083600 Sobic002G276900 Sobic002G276900 Sobic009G100300--Sobic002G276900 Sobic009G100300--Sobic007G038800 Sobic009G034400 Sobic009G034400 Sobic009G100300--Sobic009G034400 Sobic002G359900 Sobic002G359900 Sobic009G100300--Sobic002G359900 Sobic002G068300 Sobic002G068300 Sobic009G100300--Sobic002G068300 Sobic009G036900 Sobic009G036900 Sobic009G100300--Sobic009G036900 Sobic006G099800 Sobic006G099800 Sobic009G100300--Sobic006G099800 Sobic002G121000 Sobic002G121000 Sobic009G100300--Sobic002G121000 Sobic010G253100 Sobic010G253100 Sobic009G100300--Sobic010G253100 Sobic001G512900--Sobic010G071200 Sobic001G512900--Sobic010G055500 Sobic001G512900--Sobic008G142700 Sobic008G174300 Sobic008G174300 Sobic001G512900--Sobic008G174300 Sobic001G512900--Sobic001G083600 Sobic001G390500 Sobic001G390500 Sobic001G512900--Sobic001G390500 Sobic001G512900--Sobic001G149700 Sobic003G127400 Sobic003G127400 Sobic001G512900--Sobic003G127400 Sobic009G246950 Sobic009G246950 Sobic001G512900--Sobic009G246950 Sobic004G231400--Sobic010G055500 Sobic004G231400--Sobic010G071200 Sobic004G231400--Sobic001G478300 Sobic004G231400--Sobic001G149700 Sobic004G274700 Sobic004G274700 Sobic004G231400--Sobic004G274700 Sobic006G088100 Sobic006G088100 Sobic004G231400--Sobic006G088100 Sobic004G231400--Sobic006G257900 Sobic004G150400 Sobic004G150400 Sobic004G231400--Sobic004G150400 Sobic006G209500 Sobic006G209500 Sobic004G231400--Sobic006G209500 Sobic008G188700 Sobic008G188700 Sobic007G026100--Sobic008G188700 Sobic007G026100--Sobic004G231400 Sobic004G079100 Sobic004G079100 Sobic007G026100--Sobic004G079100 Sobic003G332401 Sobic003G332401 Sobic007G026100--Sobic003G332401 Sobic007G026100--Sobic004G274700 Sobic005G046100 Sobic005G046100 Sobic007G026100--Sobic005G046100 Sobic007G026100--Sobic001G478300 Sobic007G026100--Sobic001G149700 Sobic006G160600 Sobic006G160600 Sobic007G026100--Sobic006G160600
Octagon: transcription factors


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