Gene annotation
Transcriptome id Sobic.004G049100.1
Synonym Sb04g004190
Functional annotation OsFBLD1 - F-box, LRR and FBD domain containing protein, expressed
UniProt C5XVE7
Pfam PF08387
Panther DB PTHR32212 PTHR32212:SF56
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G26922 : F-box/RNI-like superfamily protein
RAP-DB (Rice) LOC_Os02g06520.1 : OsFBLD1 - F-box, LRR and FBD domain containing protein, expressed
MaizeGDB (Corn) Zm00025a034852 , Zm00025a019031
Brachypodium -
Barley HORVU0Hr1G015510.1 , HORVU0Hr1G015520.3 , HORVU0Hr1G015520.2 , HORVU0Hr1G015520.1
Wheat TraesCS6A02G133700 , TraesCS6B02G162000 , TraesCS6D02G123100
Populus -


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cDNA sequences
Sobic.004G049100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G262600 protein kinase, putative, expressed K13436: pto-interacting protein 1
2 Sobic.004G231400 OsAPRL3 adenosine 5\'-phosphosulfate reductase-like OsAPRL3, expressed -
3 Sobic.001G478300 modifier of rudimentary protein, expressed K12185: ESCRT-I complex subunit VPS37
4 Sobic.009G011700 protein kinase APK1A, chloroplast precursor, putative, expressed K04733: interleukin-1 receptor-associated kinase 4
5 Sobic.001G333200 RING zinc finger protein-like, putative, expressed -
6 Sobic.010G055500 RNA-binding motif protein, putative, expressed K12872: RBM22, pre-mRNA-splicing factor RBM22/SLT11
7 Sobic.001G371300 zinc finger, C3HC4 type domain containing protein, expressed K11982: E3 ubiquitin-protein ligase RNF115/126
8 Sobic.010G071200 "Belonging to the Sdw3 locus, Sbi_sdw3"(PubMedID : 20464438)@ubiquitin-conjugating enzyme, putative, expressed K04554: UBE2J2, NCUBE2, ubiquitin-conjugating enzyme E2 J2
9 Sobic.001G451000 two-component response regulator, putative, expressed K14491: two-component response regulator ARR-B family
10 Sobic.004G117900 expressed protein -
11 Sobic.003G298100 one zinc finger protein, putative, expressed -
12 Sobic.007G160600 CAMK_CAMK_like.38 - CAMK includes calcium/calmodulin depedent protein kinases, expressed -
13 Sobic.004G188300 regulation of Al tolerance genes and proton tolerance genes(PubMedID : 29541086)@ZOS2-11 - C2H2 zinc finger protein, expressed -
14 Sobic.004G274700 SNARE associated Golgi protein, putative, expressed -
15 Sobic.006G209500 transcription initiation factor IIE subunit beta, putative, expressed K03137: TFIIE2, GTF2E2, transcription initiation factor TFIIE subunit beta
16 Sobic.001G222300 cyclin-dependent kinase inhibitor, putative, expressed -
17 Sobic.007G150200 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@MTD1, putative, expressed -
18 Sobic.008G174300 GTPase of unknown function domain containing protein, putative, expressed K14539: large subunit GTPase 1
19 Sobic.004G320000 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
20 Sobic.002G346900 pre-mRNA-splicing factor, putative, expressed K12817: PRPF18, pre-mRNA-splicing factor 18


Gene co-expression network
sample Sobic004G049100 Sobic004G049100 Sobic002G262600 Sobic002G262600 Sobic004G049100--Sobic002G262600 Sobic004G231400 Sobic004G231400 Sobic004G049100--Sobic004G231400 Sobic001G478300 Sobic001G478300 Sobic004G049100--Sobic001G478300 Sobic009G011700 Sobic009G011700 Sobic004G049100--Sobic009G011700 Sobic001G333200 Sobic001G333200 Sobic004G049100--Sobic001G333200 Sobic010G055500 Sobic010G055500 Sobic004G049100--Sobic010G055500 Sobic001G371300 Sobic001G371300 Sobic004G049100--Sobic001G371300 Sobic010G071200 Sobic010G071200 Sobic004G049100--Sobic010G071200 Sobic001G451000 Sobic001G451000 Sobic004G049100--Sobic001G451000 Sobic002G262600--Sobic001G333200 Sobic002G350300 Sobic002G350300 Sobic002G262600--Sobic002G350300 Sobic006G209500 Sobic006G209500 Sobic002G262600--Sobic006G209500 Sobic002G262600--Sobic004G049100 Sobic006G261800 Sobic006G261800 Sobic002G262600--Sobic006G261800 Sobic002G262600--Sobic004G231400 Sobic006G088100 Sobic006G088100 Sobic002G262600--Sobic006G088100 Sobic004G117900 Sobic004G117900 Sobic002G262600--Sobic004G117900 Sobic007G160600 Sobic007G160600 Sobic002G262600--Sobic007G160600 Sobic004G231400--Sobic010G055500 Sobic004G231400--Sobic010G071200 Sobic004G231400--Sobic001G478300 Sobic001G149700 Sobic001G149700 Sobic004G231400--Sobic001G149700 Sobic004G274700 Sobic004G274700 Sobic004G231400--Sobic004G274700 Sobic004G231400--Sobic006G088100 Sobic006G257900 Sobic006G257900 Sobic004G231400--Sobic006G257900 Sobic004G150400 Sobic004G150400 Sobic004G231400--Sobic004G150400 Sobic004G231400--Sobic006G209500 Sobic001G478300--Sobic004G231400 Sobic001G478300--Sobic010G071200 Sobic001G478300--Sobic006G209500 Sobic001G427800 Sobic001G427800 Sobic001G478300--Sobic001G427800 Sobic001G478300--Sobic001G149700 Sobic001G478300--Sobic010G055500 Sobic004G263900 Sobic004G263900 Sobic001G478300--Sobic004G263900 Sobic003G273100 Sobic003G273100 Sobic001G478300--Sobic003G273100 Sobic001G478300--Sobic004G274700 Sobic009G011700--Sobic001G478300 Sobic008G180900 Sobic008G180900 Sobic009G011700--Sobic008G180900 Sobic001G076000 Sobic001G076000 Sobic009G011700--Sobic001G076000 Sobic009G011700--Sobic001G427800 Sobic009G011700--Sobic004G231400 Sobic009G011700--Sobic004G049100 Sobic009G011700--Sobic001G371300 Sobic009G237600 Sobic009G237600 Sobic009G011700--Sobic009G237600 Sobic009G011700--Sobic010G071200 Sobic001G333200--Sobic002G262600 Sobic001G107500 Sobic001G107500 Sobic001G333200--Sobic001G107500 Sobic001G333200--Sobic007G160600 Sobic001G333200--Sobic006G088100 Sobic001G333200--Sobic002G350300 Sobic003G345400 Sobic003G345400 Sobic001G333200--Sobic003G345400 Sobic003G220200 Sobic003G220200 Sobic001G333200--Sobic003G220200 Sobic007G037100 Sobic007G037100 Sobic001G333200--Sobic007G037100 Sobic006G082600 Sobic006G082600 Sobic001G333200--Sobic006G082600 Sobic010G055500--Sobic010G071200 Sobic010G055500--Sobic004G263900 Sobic010G055500--Sobic001G149700 Sobic010G055500--Sobic004G231400 Sobic001G512900 Sobic001G512900 Sobic010G055500--Sobic001G512900 Sobic006G109300 Sobic006G109300 Sobic010G055500--Sobic006G109300 Sobic001G390500 Sobic001G390500 Sobic010G055500--Sobic001G390500 Sobic008G142700 Sobic008G142700 Sobic010G055500--Sobic008G142700 Sobic010G055500--Sobic004G150400 Sobic001G371300--Sobic003G273100 Sobic002G291300 Sobic002G291300 Sobic001G371300--Sobic002G291300 Sobic001G371300--Sobic001G478300 Sobic001G371300--Sobic004G274700 Sobic001G371300--Sobic001G427800 Sobic004G079100 Sobic004G079100 Sobic001G371300--Sobic004G079100 Sobic010G083700 Sobic010G083700 Sobic001G371300--Sobic010G083700 Sobic001G056700 Sobic001G056700 Sobic001G371300--Sobic001G056700 Sobic001G371300--Sobic001G149700 Sobic010G071200--Sobic010G055500 Sobic010G071200--Sobic001G149700 Sobic010G071200--Sobic004G231400 Sobic010G071200--Sobic004G263900 Sobic010G071200--Sobic008G142700 Sobic010G071200--Sobic001G512900 Sobic010G071200--Sobic001G478300 Sobic010G071200--Sobic006G257900 Sobic001G083600 Sobic001G083600 Sobic010G071200--Sobic001G083600 Sobic005G167300 Sobic005G167300 Sobic001G451000--Sobic005G167300 Sobic002G115801 Sobic002G115801 Sobic001G451000--Sobic002G115801 Sobic010G260500 Sobic010G260500 Sobic001G451000--Sobic010G260500 Sobic002G284200 Sobic002G284200 Sobic001G451000--Sobic002G284200 Sobic003G333600 Sobic003G333600 Sobic001G451000--Sobic003G333600 Sobic007G078000 Sobic007G078000 Sobic001G451000--Sobic007G078000 Sobic001G439500 Sobic001G439500 Sobic001G451000--Sobic001G439500 Sobic004G198000 Sobic004G198000 Sobic001G451000--Sobic004G198000 Sobic004G196700 Sobic004G196700 Sobic001G451000--Sobic004G196700
Octagon: transcription factors


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