Gene annotation
Transcriptome id Sobic.007G160600.2
Synonym PEPKR2, Sb07g023380
Functional annotation CAMK_CAMK_like.38 - CAMK includes calcium/calmodulin depedent protein kinases, expressed
UniProt A0A1Z5RB35
Pfam PF07714
Panther DB PTHR24349 PTHR24349:SF146
NCBI CDD KOG0580; Serine/threonine protein kinase
KEGG Orthology -
Gene Ontology GO:0006468; protein phosphorylation GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT1G12680 : phosphoenolpyruvate carboxylase-related kinase 2
RAP-DB (Rice) LOC_Os09g29170.1 : CAMK_CAMK_like.38 - CAMK includes calcium/calmodulin depedent protein kinases, expressed
MaizeGDB (Corn) Zm00025a047323 , Zm00025a005476
Brachypodium KQJ90577 , KQJ98685
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.007G160600


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G033400 splicing factor, putative, expressed K12850: pre-mRNA-splicing factor 38B
2 Sobic.009G198100 expressed protein -
3 Sobic.001G333200 RING zinc finger protein-like, putative, expressed -
4 Sobic.007G118200 RNA recognition motif containing protein, expressed K12897: transformer-2 protein
5 Sobic.003G220200 protein kinase family protein, putative, expressed K17541: SCY1-like protein 2
6 Sobic.001G028400 domain of unknown function domain containing protein, expressed -
7 Sobic.003G359300 ELM2 domain containing protein, putative, expressed -
8 Sobic.001G356500 polypyrimidine tract-binding protein, putative, expressed K14948: PTBP2, polypyrimidine tract-binding protein 2
9 Sobic.006G109300 protein binding protein, putative, expressed -
10 Sobic.007G063200 tentative name(PubMedID : 31536532)@core histone H2A/H2B/H3/H4, putative, expressed K08066: NFYC, nuclear transcription factor Y, gamma
11 Sobic.001G131800 expressed protein K15186: ELL-associated factor
12 Sobic.008G101800 expressed protein -
13 Sobic.001G107500 cyclin-dependent kinase, putative, expressed K08819: cyclin-dependent kinase 12/13
14 Sobic.008G174300 GTPase of unknown function domain containing protein, putative, expressed K14539: large subunit GTPase 1
15 Sobic.003G355000 Transcription initiation factor TFIID subunit A containing protein, expressed K03126: transcription initiation factor TFIID subunit 12
16 Sobic.002G350300 gamma response I protein, putative, expressed K13096: splicing factor 4
17 Sobic.002G262600 protein kinase, putative, expressed K13436: pto-interacting protein 1
18 Sobic.007G145200 serine esterase family protein, putative, expressed -
19 Sobic.002G186000 CD2-binding protein-related, putative, expressed K13099: CD2BP2, CD2 antigen cytoplasmic tail-binding protein 2
20 Sobic.004G078100 zinc finger C-x8-C-x5-C-x3-H type family protein, expressed -


Gene co-expression network
sample Sobic007G160600 Sobic007G160600 Sobic010G033400 Sobic010G033400 Sobic007G160600--Sobic010G033400 Sobic009G198100 Sobic009G198100 Sobic007G160600--Sobic009G198100 Sobic001G333200 Sobic001G333200 Sobic007G160600--Sobic001G333200 Sobic007G118200 Sobic007G118200 Sobic007G160600--Sobic007G118200 Sobic003G220200 Sobic003G220200 Sobic007G160600--Sobic003G220200 Sobic001G028400 Sobic001G028400 Sobic007G160600--Sobic001G028400 Sobic003G359300 Sobic003G359300 Sobic007G160600--Sobic003G359300 Sobic001G356500 Sobic001G356500 Sobic007G160600--Sobic001G356500 Sobic006G109300 Sobic006G109300 Sobic007G160600--Sobic006G109300 Sobic010G033400--Sobic007G118200 Sobic008G174300 Sobic008G174300 Sobic010G033400--Sobic008G174300 Sobic010G033400--Sobic009G198100 Sobic004G350100 Sobic004G350100 Sobic010G033400--Sobic004G350100 Sobic010G033400--Sobic001G028400 Sobic010G260500 Sobic010G260500 Sobic010G033400--Sobic010G260500 Sobic010G033400--Sobic003G359300 Sobic003G081000 Sobic003G081000 Sobic010G033400--Sobic003G081000 Sobic001G131800 Sobic001G131800 Sobic010G033400--Sobic001G131800 Sobic009G198100--Sobic007G118200 Sobic002G034600 Sobic002G034600 Sobic009G198100--Sobic002G034600 Sobic009G198100--Sobic010G033400 Sobic003G355000 Sobic003G355000 Sobic009G198100--Sobic003G355000 Sobic009G198100--Sobic003G081000 Sobic009G198100--Sobic008G174300 Sobic009G198100--Sobic001G131800 Sobic009G198100--Sobic003G359300 Sobic007G205000 Sobic007G205000 Sobic009G198100--Sobic007G205000 Sobic002G262600 Sobic002G262600 Sobic001G333200--Sobic002G262600 Sobic001G107500 Sobic001G107500 Sobic001G333200--Sobic001G107500 Sobic001G333200--Sobic007G160600 Sobic006G088100 Sobic006G088100 Sobic001G333200--Sobic006G088100 Sobic002G350300 Sobic002G350300 Sobic001G333200--Sobic002G350300 Sobic003G345400 Sobic003G345400 Sobic001G333200--Sobic003G345400 Sobic001G333200--Sobic003G220200 Sobic007G037100 Sobic007G037100 Sobic001G333200--Sobic007G037100 Sobic006G082600 Sobic006G082600 Sobic001G333200--Sobic006G082600 Sobic007G118200--Sobic010G033400 Sobic007G118200--Sobic003G081000 Sobic007G118200--Sobic004G350100 Sobic007G118200--Sobic009G198100 Sobic007G118200--Sobic008G174300 Sobic007G118200--Sobic002G034600 Sobic006G252700 Sobic006G252700 Sobic007G118200--Sobic006G252700 Sobic007G118200--Sobic001G028400 Sobic001G408700 Sobic001G408700 Sobic007G118200--Sobic001G408700 Sobic007G145200 Sobic007G145200 Sobic003G220200--Sobic007G145200 Sobic002G157300 Sobic002G157300 Sobic003G220200--Sobic002G157300 Sobic002G157000 Sobic002G157000 Sobic003G220200--Sobic002G157000 Sobic002G320500 Sobic002G320500 Sobic003G220200--Sobic002G320500 Sobic007G137900 Sobic007G137900 Sobic003G220200--Sobic007G137900 Sobic001G251700 Sobic001G251700 Sobic003G220200--Sobic001G251700 Sobic007G011400 Sobic007G011400 Sobic003G220200--Sobic007G011400 Sobic004G349900 Sobic004G349900 Sobic003G220200--Sobic004G349900 Sobic003G220200--Sobic001G107500 Sobic001G028400--Sobic010G033400 Sobic007G063200 Sobic007G063200 Sobic001G028400--Sobic007G063200 Sobic001G056200 Sobic001G056200 Sobic001G028400--Sobic001G056200 Sobic004G263900 Sobic004G263900 Sobic001G028400--Sobic004G263900 Sobic001G028400--Sobic003G359300 Sobic001G028400--Sobic007G205000 Sobic003G437500 Sobic003G437500 Sobic001G028400--Sobic003G437500 Sobic001G028400--Sobic007G118200 Sobic010G211300 Sobic010G211300 Sobic001G028400--Sobic010G211300 Sobic003G359300--Sobic010G033400 Sobic003G359300--Sobic004G263900 Sobic003G248500 Sobic003G248500 Sobic003G359300--Sobic003G248500 Sobic003G359300--Sobic007G063200 Sobic003G359300--Sobic001G028400 Sobic003G359300--Sobic008G174300 Sobic003G359300--Sobic001G056200 Sobic002G365100 Sobic002G365100 Sobic003G359300--Sobic002G365100 Sobic002G058300 Sobic002G058300 Sobic003G359300--Sobic002G058300 Sobic003G173950 Sobic003G173950 Sobic001G356500--Sobic003G173950 Sobic001G206100 Sobic001G206100 Sobic001G356500--Sobic001G206100 Sobic007G065400 Sobic007G065400 Sobic001G356500--Sobic007G065400 Sobic002G264200 Sobic002G264200 Sobic001G356500--Sobic002G264200 Sobic001G356500--Sobic002G320500 Sobic003G170100 Sobic003G170100 Sobic001G356500--Sobic003G170100 Sobic002G121600 Sobic002G121600 Sobic001G356500--Sobic002G121600 Sobic001G257300 Sobic001G257300 Sobic001G356500--Sobic001G257300 Sobic002G161000 Sobic002G161000 Sobic001G356500--Sobic002G161000 Sobic010G055500 Sobic010G055500 Sobic006G109300--Sobic010G055500 Sobic010G071200 Sobic010G071200 Sobic006G109300--Sobic010G071200 Sobic004G150400 Sobic004G150400 Sobic006G109300--Sobic004G150400 Sobic006G109300--Sobic010G033400 Sobic006G109300--Sobic002G365100 Sobic008G142700 Sobic008G142700 Sobic006G109300--Sobic008G142700 Sobic006G109300--Sobic001G131800 Sobic006G109300--Sobic007G063200 Sobic002G272800 Sobic002G272800 Sobic006G109300--Sobic002G272800
Octagon: transcription factors


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