Gene annotation
Transcriptome id Sobic.004G017950.1
Synonym -
Functional annotation -
UniProt A0A1Z5RKP2
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G108900 expressed protein -
2 Sobic.001G222900 RNA recognition motif containing protein, putative, expressed K14411: RNA-binding protein Musashi
3 Sobic.003G343600 zinc finger, C3HC4 type domain containing protein, expressed -
4 Sobic.007G197400 pentatricopeptide, putative, expressed -
5 Sobic.003G311000 histone-lysine N-methyltransferase SUVR3, putative, expressed -
6 Sobic.001G230500 RNA recognition motif containing protein, putative, expressed K12831: SF3B4, splicing factor 3B subunit 4
7 Sobic.007G050300 zinc finger C-x8-C-x5-C-x3-H type family protein, expressed -
8 Sobic.002G280600 hydroxyproline-rich glycoprotein family protein, putative, expressed -
9 Sobic.003G061000 ribosomal protein L3, putative, expressed K02906: RP-L3, MRPL3, large subunit ribosomal protein L3
10 Sobic.003G140900 OsFBL33 - F-box domain and LRR containing protein, expressed -
11 Sobic.001G191100 OsFBX157 - F-box domain containing protein, expressed -
12 Sobic.005G007700 expressed protein -
13 Sobic.003G123000 splicing factor 3 subunit 1, putative, expressed K12825: SF3A1, splicing factor 3A subunit 1
14 Sobic.010G000700 zinc finger, C3HC4 type domain containing protein, expressed K11982: E3 ubiquitin-protein ligase RNF115/126
15 Sobic.001G151900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@DUF593 domain containing protein, expressed -
16 Sobic.001G309100 zinc knuckle domain containing protein, expressed K09250: cellular nucleic acid-binding protein
17 Sobic.004G018200 glycine-rich protein 2, putative, expressed -
18 Sobic.003G085600 Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed -
19 Sobic.008G056900 RFC4 - Putative clamp loader of PCNA, replication factor C subunit 4, expressed K10755: replication factor C subunit 2/4
20 Sobic.001G294100 ICE-like protease p20 domain containing protein, expressed -


Gene co-expression network
sample Sobic004G017950 Sobic004G017950 Sobic001G108900 Sobic001G108900 Sobic004G017950--Sobic001G108900 Sobic001G222900 Sobic001G222900 Sobic004G017950--Sobic001G222900 Sobic003G343600 Sobic003G343600 Sobic004G017950--Sobic003G343600 Sobic007G197400 Sobic007G197400 Sobic004G017950--Sobic007G197400 Sobic003G311000 Sobic003G311000 Sobic004G017950--Sobic003G311000 Sobic001G230500 Sobic001G230500 Sobic004G017950--Sobic001G230500 Sobic007G050300 Sobic007G050300 Sobic004G017950--Sobic007G050300 Sobic002G280600 Sobic002G280600 Sobic004G017950--Sobic002G280600 Sobic003G061000 Sobic003G061000 Sobic004G017950--Sobic003G061000 Sobic001G108900--Sobic001G222900 Sobic007G117100 Sobic007G117100 Sobic001G108900--Sobic007G117100 Sobic003G140900 Sobic003G140900 Sobic001G108900--Sobic003G140900 Sobic001G294700 Sobic001G294700 Sobic001G108900--Sobic001G294700 Sobic002G106900 Sobic002G106900 Sobic001G108900--Sobic002G106900 Sobic001G108900--Sobic004G017950 Sobic001G309100 Sobic001G309100 Sobic001G108900--Sobic001G309100 Sobic004G246700 Sobic004G246700 Sobic001G108900--Sobic004G246700 Sobic001G426900 Sobic001G426900 Sobic001G108900--Sobic001G426900 Sobic001G222900--Sobic001G108900 Sobic003G123000 Sobic003G123000 Sobic001G222900--Sobic003G123000 Sobic005G007700 Sobic005G007700 Sobic001G222900--Sobic005G007700 Sobic001G222900--Sobic004G246700 Sobic005G079800 Sobic005G079800 Sobic001G222900--Sobic005G079800 Sobic008G165100 Sobic008G165100 Sobic001G222900--Sobic008G165100 Sobic002G309800 Sobic002G309800 Sobic001G222900--Sobic002G309800 Sobic002G224700 Sobic002G224700 Sobic001G222900--Sobic002G224700 Sobic004G095300 Sobic004G095300 Sobic001G222900--Sobic004G095300 Sobic003G343600--Sobic003G140900 Sobic002G223300 Sobic002G223300 Sobic003G343600--Sobic002G223300 Sobic005G072400 Sobic005G072400 Sobic003G343600--Sobic005G072400 Sobic006G248500 Sobic006G248500 Sobic003G343600--Sobic006G248500 Sobic004G285000 Sobic004G285000 Sobic003G343600--Sobic004G285000 Sobic002G268900 Sobic002G268900 Sobic003G343600--Sobic002G268900 Sobic005G198200 Sobic005G198200 Sobic003G343600--Sobic005G198200 Sobic006G278200 Sobic006G278200 Sobic003G343600--Sobic006G278200 Sobic004G085300 Sobic004G085300 Sobic003G343600--Sobic004G085300 Sobic003G085600 Sobic003G085600 Sobic007G197400--Sobic003G085600 Sobic008G056900 Sobic008G056900 Sobic007G197400--Sobic008G056900 Sobic002G408600 Sobic002G408600 Sobic007G197400--Sobic002G408600 Sobic001G485600 Sobic001G485600 Sobic007G197400--Sobic001G485600 Sobic008G098600 Sobic008G098600 Sobic007G197400--Sobic008G098600 Sobic006G180700 Sobic006G180700 Sobic007G197400--Sobic006G180700 Sobic010G278600 Sobic010G278600 Sobic007G197400--Sobic010G278600 Sobic009G093400 Sobic009G093400 Sobic007G197400--Sobic009G093400 Sobic004G089500 Sobic004G089500 Sobic007G197400--Sobic004G089500 Sobic001G390500 Sobic001G390500 Sobic003G311000--Sobic001G390500 Sobic003G311000--Sobic001G309100 Sobic007G088900 Sobic007G088900 Sobic003G311000--Sobic007G088900 Sobic001G335201 Sobic001G335201 Sobic003G311000--Sobic001G335201 Sobic003G189900 Sobic003G189900 Sobic003G311000--Sobic003G189900 Sobic004G057800 Sobic004G057800 Sobic003G311000--Sobic004G057800 Sobic001G472100 Sobic001G472100 Sobic003G311000--Sobic001G472100 Sobic003G185200 Sobic003G185200 Sobic003G311000--Sobic003G185200 Sobic002G365100 Sobic002G365100 Sobic003G311000--Sobic002G365100 Sobic003G433500 Sobic003G433500 Sobic001G230500--Sobic003G433500 Sobic001G168900 Sobic001G168900 Sobic001G230500--Sobic001G168900 Sobic005G046900 Sobic005G046900 Sobic001G230500--Sobic005G046900 Sobic009G195200 Sobic009G195200 Sobic001G230500--Sobic009G195200 Sobic006G120800 Sobic006G120800 Sobic001G230500--Sobic006G120800 Sobic001G230500--Sobic005G072400 Sobic003G427100 Sobic003G427100 Sobic001G230500--Sobic003G427100 Sobic007G187600 Sobic007G187600 Sobic001G230500--Sobic007G187600 Sobic001G038100 Sobic001G038100 Sobic001G230500--Sobic001G038100 Sobic006G051900 Sobic006G051900 Sobic007G050300--Sobic006G051900 Sobic007G050300--Sobic006G120800 Sobic010G197800 Sobic010G197800 Sobic007G050300--Sobic010G197800 Sobic002G095700 Sobic002G095700 Sobic007G050300--Sobic002G095700 Sobic009G192500 Sobic009G192500 Sobic007G050300--Sobic009G192500 Sobic010G079800 Sobic010G079800 Sobic007G050300--Sobic010G079800 Sobic007G050300--Sobic001G038100 Sobic003G253400 Sobic003G253400 Sobic007G050300--Sobic003G253400 Sobic007G050300--Sobic007G117100 Sobic002G143900 Sobic002G143900 Sobic002G280600--Sobic002G143900 Sobic002G394800 Sobic002G394800 Sobic002G280600--Sobic002G394800 Sobic010G232900 Sobic010G232900 Sobic002G280600--Sobic010G232900 Sobic007G027700 Sobic007G027700 Sobic002G280600--Sobic007G027700 Sobic002G280600--Sobic003G123000 Sobic006G233300 Sobic006G233300 Sobic002G280600--Sobic006G233300 Sobic010G239800 Sobic010G239800 Sobic002G280600--Sobic010G239800 Sobic003G273400 Sobic003G273400 Sobic002G280600--Sobic003G273400 Sobic001G526300 Sobic001G526300 Sobic002G280600--Sobic001G526300 Sobic010G143200 Sobic010G143200 Sobic003G061000--Sobic010G143200 Sobic002G095900 Sobic002G095900 Sobic003G061000--Sobic002G095900 Sobic007G000400 Sobic007G000400 Sobic003G061000--Sobic007G000400 Sobic006G066000 Sobic006G066000 Sobic003G061000--Sobic006G066000 Sobic001G261496 Sobic001G261496 Sobic003G061000--Sobic001G261496 Sobic008G091671 Sobic008G091671 Sobic003G061000--Sobic008G091671 Sobic003G159450 Sobic003G159450 Sobic003G061000--Sobic003G159450 Sobic007G112900 Sobic007G112900 Sobic003G061000--Sobic007G112900 Sobic003G061000--Sobic008G056900
Octagon: transcription factors


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