Gene annotation
Transcriptome id Sobic.003G140900.1
Synonym Sb03g012010
Functional annotation OsFBL33 - F-box domain and LRR containing protein, expressed
UniProt C5XI26
Pfam PF00646
Panther DB PTHR32133 PTHR32133:SF131
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os07g02910.1 : OsFBL33 - F-box domain and LRR containing protein, expressed
MaizeGDB (Corn) -
Brachypodium KQJ93971
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.003G140900


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G343600 zinc finger, C3HC4 type domain containing protein, expressed -
2 Sobic.002G223300 nucleoporin p58/p45, putative, expressed K14307: NUPL1, nucleoporin p58/p45
3 Sobic.002G014700 OsFBX209 - F-box domain containing protein, expressed -
4 Sobic.001G108900 expressed protein -
5 Sobic.002G089900 OsFBX237 - F-box domain containing protein, expressed -
6 Sobic.007G117100 tentative name(PubMedID : 31536532)@histone-like transcription factor and archaeal histone, putative, expressed -
7 Sobic.003G354100 expressed protein -
8 Sobic.003G132700 OsFBX237 - F-box domain containing protein, expressed -
9 Sobic.004G285000 MT-A70 domain containing protein, expressed K05925: mRNA m6A methyltransferase catalytic subunit
10 Sobic.002G334600 OsFBX251 - F-box domain containing protein, expressed -
11 Sobic.007G139400 OsFBL33 - F-box domain and LRR containing protein, expressed -
12 Sobic.004G085300 Sel1 repeat domain containing protein, putative, expressed -
13 Sobic.006G248500 expressed protein -
14 Sobic.001G013300 SWIM zinc finger family protein, putative, expressed -
15 Sobic.002G268900 flap endonuclease, putative, expressed K15338: GEN1, flap endonuclease GEN
16 Sobic.005G178950 - -
17 Sobic.003G114500 zinc knuckle family protein, putative, expressed -
18 Sobic.007G016900 OsFBL26 - F-box domain and LRR containing protein, expressed -
19 Sobic.001G215400 OsFBX387 - F-box domain containing protein, expressed -
20 Sobic.008G058800 OsFBX369 - F-box domain containing protein, expressed -


Gene co-expression network
sample Sobic003G140900 Sobic003G140900 Sobic003G343600 Sobic003G343600 Sobic003G140900--Sobic003G343600 Sobic002G223300 Sobic002G223300 Sobic003G140900--Sobic002G223300 Sobic002G014700 Sobic002G014700 Sobic003G140900--Sobic002G014700 Sobic001G108900 Sobic001G108900 Sobic003G140900--Sobic001G108900 Sobic002G089900 Sobic002G089900 Sobic003G140900--Sobic002G089900 Sobic007G117100 Sobic007G117100 Sobic003G140900--Sobic007G117100 Sobic003G354100 Sobic003G354100 Sobic003G140900--Sobic003G354100 Sobic003G132700 Sobic003G132700 Sobic003G140900--Sobic003G132700 Sobic004G285000 Sobic004G285000 Sobic003G140900--Sobic004G285000 Sobic003G343600--Sobic003G140900 Sobic003G343600--Sobic002G223300 Sobic005G072400 Sobic005G072400 Sobic003G343600--Sobic005G072400 Sobic006G248500 Sobic006G248500 Sobic003G343600--Sobic006G248500 Sobic003G343600--Sobic004G285000 Sobic002G268900 Sobic002G268900 Sobic003G343600--Sobic002G268900 Sobic005G198200 Sobic005G198200 Sobic003G343600--Sobic005G198200 Sobic006G278200 Sobic006G278200 Sobic003G343600--Sobic006G278200 Sobic004G085300 Sobic004G085300 Sobic003G343600--Sobic004G085300 Sobic002G334600 Sobic002G334600 Sobic002G223300--Sobic002G334600 Sobic002G223300--Sobic004G085300 Sobic009G151200 Sobic009G151200 Sobic002G223300--Sobic009G151200 Sobic002G223300--Sobic003G132700 Sobic007G046900 Sobic007G046900 Sobic002G223300--Sobic007G046900 Sobic002G223300--Sobic004G285000 Sobic006G210200 Sobic006G210200 Sobic002G223300--Sobic006G210200 Sobic002G050500 Sobic002G050500 Sobic002G223300--Sobic002G050500 Sobic002G339800 Sobic002G339800 Sobic002G223300--Sobic002G339800 Sobic002G014700--Sobic003G132700 Sobic002G014700--Sobic007G117100 Sobic003G420700 Sobic003G420700 Sobic002G014700--Sobic003G420700 Sobic001G507400 Sobic001G507400 Sobic002G014700--Sobic001G507400 Sobic001G038100 Sobic001G038100 Sobic002G014700--Sobic001G038100 Sobic009G192500 Sobic009G192500 Sobic002G014700--Sobic009G192500 Sobic009G034400 Sobic009G034400 Sobic002G014700--Sobic009G034400 Sobic002G014700--Sobic003G140900 Sobic001G309100 Sobic001G309100 Sobic002G014700--Sobic001G309100 Sobic001G222900 Sobic001G222900 Sobic001G108900--Sobic001G222900 Sobic001G108900--Sobic007G117100 Sobic001G108900--Sobic003G140900 Sobic001G294700 Sobic001G294700 Sobic001G108900--Sobic001G294700 Sobic002G106900 Sobic002G106900 Sobic001G108900--Sobic002G106900 Sobic004G017950 Sobic004G017950 Sobic001G108900--Sobic004G017950 Sobic001G108900--Sobic001G309100 Sobic004G246700 Sobic004G246700 Sobic001G108900--Sobic004G246700 Sobic001G426900 Sobic001G426900 Sobic001G108900--Sobic001G426900 Sobic004G078100 Sobic004G078100 Sobic002G089900--Sobic004G078100 Sobic009G044900 Sobic009G044900 Sobic002G089900--Sobic009G044900 Sobic003G433500 Sobic003G433500 Sobic002G089900--Sobic003G433500 Sobic002G089900--Sobic006G248500 Sobic002G089900--Sobic003G132700 Sobic002G095700 Sobic002G095700 Sobic002G089900--Sobic002G095700 Sobic002G089900--Sobic007G117100 Sobic004G013600 Sobic004G013600 Sobic002G089900--Sobic004G013600 Sobic002G259800 Sobic002G259800 Sobic002G089900--Sobic002G259800 Sobic007G117100--Sobic001G038100 Sobic007G117100--Sobic003G433500 Sobic007G117100--Sobic003G132700 Sobic006G120800 Sobic006G120800 Sobic007G117100--Sobic006G120800 Sobic007G117100--Sobic001G507400 Sobic007G117100--Sobic001G309100 Sobic007G117100--Sobic003G354100 Sobic007G117100--Sobic002G014700 Sobic007G117100--Sobic002G089900 Sobic003G354100--Sobic003G433500 Sobic003G354100--Sobic004G013600 Sobic003G354100--Sobic003G132700 Sobic003G354100--Sobic007G117100 Sobic007G188900 Sobic007G188900 Sobic003G354100--Sobic007G188900 Sobic007G139400 Sobic007G139400 Sobic003G354100--Sobic007G139400 Sobic006G092800 Sobic006G092800 Sobic003G354100--Sobic006G092800 Sobic003G354100--Sobic006G248500 Sobic009G129600 Sobic009G129600 Sobic003G354100--Sobic009G129600 Sobic003G132700--Sobic009G192500 Sobic003G132700--Sobic003G354100 Sobic003G132700--Sobic007G117100 Sobic003G132700--Sobic002G089900 Sobic003G132700--Sobic002G014700 Sobic003G132700--Sobic002G223300 Sobic003G132700--Sobic002G334600 Sobic003G132700--Sobic003G433500 Sobic003G132700--Sobic001G507400 Sobic004G086200 Sobic004G086200 Sobic004G285000--Sobic004G086200 Sobic004G111000 Sobic004G111000 Sobic004G285000--Sobic004G111000 Sobic001G346900 Sobic001G346900 Sobic004G285000--Sobic001G346900 Sobic003G427100 Sobic003G427100 Sobic004G285000--Sobic003G427100 Sobic004G285000--Sobic009G151200 Sobic010G215900 Sobic010G215900 Sobic004G285000--Sobic010G215900 Sobic003G409200 Sobic003G409200 Sobic004G285000--Sobic003G409200 Sobic007G044100 Sobic007G044100 Sobic004G285000--Sobic007G044100 Sobic001G013300 Sobic001G013300 Sobic004G285000--Sobic001G013300
Octagon: transcription factors


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