Gene annotation
Transcriptome id Sobic.004G063100.2,Sobic.004G063100.1
Synonym Sb04g005240
Functional annotation calmodulin binding protein, putative, expressed
UniProt C5XW98
Pfam PF07887
Panther DB PTHR31713 PTHR31713:SF5
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0006950; response to stress GO:0005516calmodulin binding


Orthologs (automatic annotation)
TAIR AT5G57580 : Calmodulin-binding protein
RAP-DB (Rice) LOC_Os02g08120.2 : calmodulin binding protein, putative, expressed
MaizeGDB (Corn) Zm00025a038129 , Zm00025a034753 , Zm00025a020723 , Zm00025a019183
Brachypodium KQJ93619 , KQJ93618
Barley HORVU6Hr1G030270.12 , HORVU6Hr1G030270.13 , HORVU6Hr1G030220.5 , HORVU6Hr1G030270.1 , HORVU6Hr1G030270.2 , HORVU6Hr1G030270.3 , HORVU6Hr1G030270.4 , HORVU6Hr1G030270.5 , HORVU6Hr1G030270.6 , HORVU6Hr1G030270.7 , HORVU6Hr1G030270.8 , HORVU6Hr1G030270.9 , HORVU6Hr1G030270.10 , HORVU6Hr1G030270.11 , HORVU6Hr1G030270.14 , HORVU6Hr1G030270.15 , HORVU6Hr1G030220.3 , HORVU6Hr1G030220.2 , HORVU6Hr1G030220.1 , HORVU6Hr1G030220.7 , HORVU6Hr1G030220.6 , HORVU6Hr1G030220.4
Wheat TraesCS6B02G179500 , TraesCS6A02G151200 , TraesCS6D02G141400 , TraesCS2A02G311900 , TraesCS2A02G311900
Populus PNS93577 , PNS93579 , PNS93578


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cDNA sequences
Sobic.004G063100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G065100 XRN 5\'-3\' exonuclease N-terminus domain containing protein, expressed K12619: XRN2, 5'-3' exoribonuclease 2
2 Sobic.009G101400 "Phylogenetic analysis of canonical DREB1 and DREB2 genes in sorghum with those genes in maize, rice, and Arabidopsis. "(PubMedID : 24086146)@Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed -
3 Sobic.002G181300 expressed protein -
4 Sobic.003G054200 thioredoxin, putative, expressed K03671: thioredoxin 1
5 Sobic.005G086200 PHD finger protein, putative, expressed -
6 Sobic.006G220000 bromodomain containing protein, expressed -
7 Sobic.004G087600 RNA recognition motif containing protein, putative, expressed -
8 Sobic.002G425700 ribonucleases P/MRP protein subunit POP1 containing protein, expressed K01164: ribonuclease P/MRP protein subunit POP1
9 Sobic.007G110200 wound responsive protein, putative, expressed -
10 Sobic.001G294200 casein kinase II subunit beta-4, putative, expressed K03115: casein kinase II subunit beta
11 Sobic.001G090500 YT521-B-like family domain containing protein, expressed -
12 Sobic.002G309800 casein kinase II subunit beta-4, putative, expressed K03115: casein kinase II subunit beta
13 Sobic.003G081700 OsWAK1 - OsWAK receptor-like cytoplasmic kinase OsWAK-RLCK, expressed -
14 Sobic.003G171200 caffeine-induced death protein 1, putative, expressed -
15 Sobic.004G317100 DENN domain containing protein, expressed -
16 Sobic.001G191600 TMS membrane protein/tumour differentially expressed protein, putative, expressed -
17 Sobic.002G404200 F-box domain containing protein, expressed -
18 Sobic.003G381200 KH domain containing protein, putative, expressed K14945: protein quaking
19 Sobic.009G085400 acyl-activating enzyme 14, putative, expressed -
20 Sobic.001G261900 caffeine-induced death protein 1, putative, expressed -


Gene co-expression network
sample Sobic004G063100 Sobic004G063100 Sobic007G065100 Sobic007G065100 Sobic004G063100--Sobic007G065100 Sobic009G101400 Sobic009G101400 Sobic004G063100--Sobic009G101400 Sobic002G181300 Sobic002G181300 Sobic004G063100--Sobic002G181300 Sobic003G054200 Sobic003G054200 Sobic004G063100--Sobic003G054200 Sobic005G086200 Sobic005G086200 Sobic004G063100--Sobic005G086200 Sobic006G220000 Sobic006G220000 Sobic004G063100--Sobic006G220000 Sobic004G087600 Sobic004G087600 Sobic004G063100--Sobic004G087600 Sobic002G425700 Sobic002G425700 Sobic004G063100--Sobic002G425700 Sobic007G110200 Sobic007G110200 Sobic004G063100--Sobic007G110200 Sobic007G065100--Sobic002G425700 Sobic007G065100--Sobic002G181300 Sobic003G381200 Sobic003G381200 Sobic007G065100--Sobic003G381200 Sobic008G172300 Sobic008G172300 Sobic007G065100--Sobic008G172300 Sobic001G090500 Sobic001G090500 Sobic007G065100--Sobic001G090500 Sobic001G498600 Sobic001G498600 Sobic007G065100--Sobic001G498600 Sobic001G072500 Sobic001G072500 Sobic007G065100--Sobic001G072500 Sobic006G153900 Sobic006G153900 Sobic007G065100--Sobic006G153900 Sobic006G119400 Sobic006G119400 Sobic007G065100--Sobic006G119400 Sobic003G291500 Sobic003G291500 Sobic009G101400--Sobic003G291500 Sobic001G294200 Sobic001G294200 Sobic009G101400--Sobic001G294200 Sobic001G365800 Sobic001G365800 Sobic009G101400--Sobic001G365800 Sobic003G327100 Sobic003G327100 Sobic009G101400--Sobic003G327100 Sobic003G081700 Sobic003G081700 Sobic009G101400--Sobic003G081700 Sobic009G129900 Sobic009G129900 Sobic009G101400--Sobic009G129900 Sobic001G530500 Sobic001G530500 Sobic009G101400--Sobic001G530500 Sobic006G269000 Sobic006G269000 Sobic009G101400--Sobic006G269000 Sobic001G106700 Sobic001G106700 Sobic009G101400--Sobic001G106700 Sobic002G181300--Sobic007G065100 Sobic004G317100 Sobic004G317100 Sobic002G181300--Sobic004G317100 Sobic004G131040 Sobic004G131040 Sobic002G181300--Sobic004G131040 Sobic004G181700 Sobic004G181700 Sobic002G181300--Sobic004G181700 Sobic002G181300--Sobic002G425700 Sobic002G276100 Sobic002G276100 Sobic002G181300--Sobic002G276100 Sobic010G000600 Sobic010G000600 Sobic002G181300--Sobic010G000600 Sobic002G181300--Sobic001G498600 Sobic005G044400 Sobic005G044400 Sobic002G181300--Sobic005G044400 Sobic003G071000 Sobic003G071000 Sobic003G054200--Sobic003G071000 Sobic002G309800 Sobic002G309800 Sobic003G054200--Sobic002G309800 Sobic002G242200 Sobic002G242200 Sobic003G054200--Sobic002G242200 Sobic001G108900 Sobic001G108900 Sobic003G054200--Sobic001G108900 Sobic006G252300 Sobic006G252300 Sobic003G054200--Sobic006G252300 Sobic002G125900 Sobic002G125900 Sobic003G054200--Sobic002G125900 Sobic005G160400 Sobic005G160400 Sobic003G054200--Sobic005G160400 Sobic003G054200--Sobic005G044400 Sobic010G082700 Sobic010G082700 Sobic003G054200--Sobic010G082700 Sobic005G086200--Sobic004G087600 Sobic010G146600 Sobic010G146600 Sobic005G086200--Sobic010G146600 Sobic009G225200 Sobic009G225200 Sobic005G086200--Sobic009G225200 Sobic009G085400 Sobic009G085400 Sobic005G086200--Sobic009G085400 Sobic002G317300 Sobic002G317300 Sobic005G086200--Sobic002G317300 Sobic004G211400 Sobic004G211400 Sobic005G086200--Sobic004G211400 Sobic002G336800 Sobic002G336800 Sobic005G086200--Sobic002G336800 Sobic004G083700 Sobic004G083700 Sobic005G086200--Sobic004G083700 Sobic008G011100 Sobic008G011100 Sobic005G086200--Sobic008G011100 Sobic006G052300 Sobic006G052300 Sobic006G220000--Sobic006G052300 Sobic004G039200 Sobic004G039200 Sobic006G220000--Sobic004G039200 Sobic004G264300 Sobic004G264300 Sobic006G220000--Sobic004G264300 Sobic009G065100 Sobic009G065100 Sobic006G220000--Sobic009G065100 Sobic007G161000 Sobic007G161000 Sobic006G220000--Sobic007G161000 Sobic006G274600 Sobic006G274600 Sobic006G220000--Sobic006G274600 Sobic002G151600 Sobic002G151600 Sobic006G220000--Sobic002G151600 Sobic006G220000--Sobic008G011100 Sobic007G117400 Sobic007G117400 Sobic006G220000--Sobic007G117400 Sobic004G087600--Sobic008G011100 Sobic004G018300 Sobic004G018300 Sobic004G087600--Sobic004G018300 Sobic005G106500 Sobic005G106500 Sobic004G087600--Sobic005G106500 Sobic002G031400 Sobic002G031400 Sobic004G087600--Sobic002G031400 Sobic004G087600--Sobic002G309800 Sobic003G133900 Sobic003G133900 Sobic004G087600--Sobic003G133900 Sobic001G281600 Sobic001G281600 Sobic004G087600--Sobic001G281600 Sobic001G124000 Sobic001G124000 Sobic004G087600--Sobic001G124000 Sobic001G360900 Sobic001G360900 Sobic004G087600--Sobic001G360900 Sobic002G425700--Sobic007G065100 Sobic002G425700--Sobic006G153900 Sobic002G425700--Sobic002G276100 Sobic007G165600 Sobic007G165600 Sobic002G425700--Sobic007G165600 Sobic010G143800 Sobic010G143800 Sobic002G425700--Sobic010G143800 Sobic001G261501 Sobic001G261501 Sobic002G425700--Sobic001G261501 Sobic002G425700--Sobic001G498600 Sobic005G122700 Sobic005G122700 Sobic002G425700--Sobic005G122700 Sobic002G425700--Sobic001G090500 Sobic010G258300 Sobic010G258300 Sobic007G110200--Sobic010G258300 Sobic008G073900 Sobic008G073900 Sobic007G110200--Sobic008G073900 Sobic007G110200--Sobic010G000600 Sobic007G205600 Sobic007G205600 Sobic007G110200--Sobic007G205600 Sobic003G222300 Sobic003G222300 Sobic007G110200--Sobic003G222300 Sobic001G031300 Sobic001G031300 Sobic007G110200--Sobic001G031300 Sobic003G222600 Sobic003G222600 Sobic007G110200--Sobic003G222600 Sobic009G154600 Sobic009G154600 Sobic007G110200--Sobic009G154600 Sobic006G220600 Sobic006G220600 Sobic007G110200--Sobic006G220600
Octagon: transcription factors


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