Gene annotation
| Transcriptome id | Sobic.003G081700.1 |
|---|---|
| Synonym | |
| Functional annotation | OsWAK1 - OsWAK receptor-like cytoplasmic kinase OsWAK-RLCK, expressed |
| UniProt | C5XQQ9 |
| Pfam | PF13947 PF00069 |
| Panther DB | PTHR27005 PTHR27005:SF55 |
| NCBI CDD | KOG1187; Serine/threonine protein kinase |
| KEGG Orthology | - |
| Gene Ontology | GO:0006468; protein phosphorylation GO:0005524ATP binding GO:0004672protein kinase activity |
Orthologs (automatic annotation)
| TAIR | AT1G18390 : Protein kinase superfamily protein |
|---|---|
| RAP-DB (Rice) | LOC_Os01g04409.1 : OsWAK1 - OsWAK receptor-like cytoplasmic kinase OsWAK-RLCK, expressed |
| MaizeGDB (Corn) | Zm00025a023547 , Zm00025a035581 |
| Brachypodium | PNT73415 , PNT69890 |
| Barley | - |
| Wheat | TraesCS3A02G034300 , TraesCS3A02G034300 , TraesCS3A02G034300 , TraesCS3A02G034300 , TraesCS3A02G034300 , TraesCS3A02G033400 , TraesCS3B02G049100 , TraesCS3B02G049100 , TraesCS3B02G049100 , TraesCS3B02G049100 , TraesCS3B02G049100 , TraesCS3B02G049100 , TraesCS3B02G049100 , TraesCS3D02G045200 , TraesCS3B02G049100 , TraesCS3B02G049100 , TraesCS3B02G049100 , TraesCS3B02G049100 , TraesCS3D02G045200 , TraesCS3D02G045200 , TraesCS3D02G045200 , TraesCS3D02G045200 , TraesCS3D02G045200 , TraesCS3D02G045200 , TraesCS3D02G045200 , TraesCS3D02G045200 , TraesCS3A02G033400 , TraesCS3A02G033400 , TraesCS3A02G033400 , TraesCS3A02G033400 , TraesCS3A02G033400 |
| Populus | - |
JBrowse
Expression pattern by RNA-Seq analysis
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Find similar expressed genes
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| Rank | Gene | Function | KEGG orthology |
|---|---|---|---|
| 1 | Sobic.008G146900 | "similar to Leucine Rich Repeat family protein, expressed"(PubMedID : 29862293)@disease resistance protein, putative, expressed | - |
| 2 | Sobic.001G159400 | protein kinase domain containing protein, expressed | - |
| 3 | Sobic.002G137000 | protein kinase, putative, expressed | - |
| 4 | Sobic.004G181700 | calmodulin binding protein, putative, expressed | - |
| 5 | Sobic.010G184600 | Homologous to Arabidopsis heme oxygenase 1 (AtHO1)(PubMedID : 11402195)@heme oxygenase 1, putative, expressed | K00510: heme oxygenase 1 |
| 6 | Sobic.001G530500 | per1-like family protein, putative, expressed | - |
| 7 | Sobic.001G106600 | SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@membrane protein, putative, expressed | - |
| 8 | Sobic.004G181600 | calmodulin binding protein, putative, expressed | - |
| 9 | Sobic.001G072700 | expressed protein | - |
| 10 | Sobic.009G101400 | "Phylogenetic analysis of canonical DREB1 and DREB2 genes in sorghum with those genes in maize, rice, and Arabidopsis. "(PubMedID : 24086146)@Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed | - |
| 11 | Sobic.006G086500 | STE_MEKK_ste11_MAP3K.16 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed | - |
| 12 | Sobic.009G017400 | "gsn1/LARGE8(Ortholog in rice:Gou et al., 2018(PubMedID : 31659915)@dual specificity protein phosphatase, putative, expressed | - |
| 13 | Sobic.007G007000 | DUF250 domain containing protein, putative, expressed | K15356: VRG4, GDP-mannose transporter |
| 14 | Sobic.004G317100 | DENN domain containing protein, expressed | - |
| 15 | Sobic.004G121100 | expressed protein | - |
| 16 | Sobic.002G104100 | FYVE zinc finger domain containing protein, expressed | - |
| 17 | Sobic.002G276100 | OsLonP4 - Putative Lon protease homologue, expressed | K01338: ATP-dependent Lon protease |
| 18 | Sobic.004G116000 | expressed protein | - |
| 19 | Sobic.004G295300 | expressed protein | - |
| 20 | Sobic.001G387600 | ethylene-insensitive 3, putative, expressed | K14514: ethylene-insensitive protein 3 |
Gene co-expression network
Octagon: transcription factors
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