Gene annotation
Transcriptome id Sobic.004G317100.1
Synonym Sb04g034810
Functional annotation DENN domain containing protein, expressed
UniProt C5XTK6
Pfam PF03456 PF02141
Panther DB PTHR15288 PTHR15288:SF4
NCBI CDD KOG3569; RAS signaling inhibitor ST5
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G35560 : DENN (AEX-3) domain-containing protein
RAP-DB (Rice) LOC_Os02g53700.4 : DENN domain containing protein, expressed
MaizeGDB (Corn) Zm00025a033036
Brachypodium PNT69535
Barley HORVU6Hr1G081250.8 , HORVU6Hr1G081250.6 , HORVU6Hr1G081250.7 , HORVU6Hr1G081250.4 , HORVU6Hr1G081250.5 , HORVU6Hr1G081250.2 , HORVU6Hr1G081250.3 , HORVU6Hr1G081250.1
Wheat TraesCS6B02G366800 , TraesCS6D02G315900 , TraesCS6B02G366800 , TraesCS6A02G336000 , TraesCS6A02G336000 , TraesCS6A02G336000 , TraesCS6A02G336000
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G181700 calmodulin binding protein, putative, expressed -
2 Sobic.001G498600 3-5 exonuclease family protein, putative, expressed K12591: RRP6, exosome complex exonuclease RRP6
3 Sobic.003G359600 OsFBL4 - F-box domain and LRR containing protein, expressed K13463: coronatine-insensitive protein 1
4 Sobic.007G193700 Sua5/YciO/YrdC/YwlC family protein, putative, expressed -
5 Sobic.001G159400 protein kinase domain containing protein, expressed -
6 Sobic.010G256700 MATE efflux family protein, putative, expressed K03327: TC.MATE, SLC47A, norM, mdtK, multidrug resistance protein, MATE family
7 Sobic.001G365900 PWWP domain containing protein, expressed -
8 Sobic.010G112000 expressed protein K17906: autophagy-related protein 2
9 Sobic.002G173000 disease resistance protein RGA2, putative, expressed -
10 Sobic.006G237400 cyclic nucleotide-gated ion channel, putative, expressed K05391: cyclic nucleotide gated channel, plant
11 Sobic.004G200200 joka2, putative, expressed K17987: next to BRCA1 gene 1 protein
12 Sobic.005G032800 splicing factor, putative, expressed K13109: IK, RED, IK cytokine
13 Sobic.009G053900 HECT-domain domain containing protein, expressed K10589: ubiquitin-protein ligase E3 C
14 Sobic.010G153700 cyclic nucleotide-gated ion channel 1, putative, expressed K05391: cyclic nucleotide gated channel, plant
15 Sobic.002G134200 WD domain, G-beta repeat domain containing protein, expressed K11293: HIRA, protein HIRA/HIR1
16 Sobic.003G029700 CK1_CaseinKinase_1a.5 - CK1 includes the casein kinase 1 kinases, expressed -
17 Sobic.001G121200 zinc finger, C3HC4 type domain containing protein, expressed -
18 Sobic.001G474600 calmodulin-binding transcription activator, putative, expressed -
19 Sobic.003G086900 C2 domain containing protein, putative, expressed -
20 Sobic.006G131500 serine/threonine-protein kinase GCN2, putative, expressed K16196: eukaryotic translation initiation factor 2-alpha kinase 4


Gene co-expression network
sample Sobic004G317100 Sobic004G317100 Sobic004G181700 Sobic004G181700 Sobic004G317100--Sobic004G181700 Sobic001G498600 Sobic001G498600 Sobic004G317100--Sobic001G498600 Sobic003G359600 Sobic003G359600 Sobic004G317100--Sobic003G359600 Sobic007G193700 Sobic007G193700 Sobic004G317100--Sobic007G193700 Sobic001G159400 Sobic001G159400 Sobic004G317100--Sobic001G159400 Sobic010G256700 Sobic010G256700 Sobic004G317100--Sobic010G256700 Sobic001G365900 Sobic001G365900 Sobic004G317100--Sobic001G365900 Sobic010G112000 Sobic010G112000 Sobic004G317100--Sobic010G112000 Sobic002G173000 Sobic002G173000 Sobic004G317100--Sobic002G173000 Sobic004G181700--Sobic004G317100 Sobic002G276100 Sobic002G276100 Sobic004G181700--Sobic002G276100 Sobic004G181700--Sobic001G159400 Sobic004G181600 Sobic004G181600 Sobic004G181700--Sobic004G181600 Sobic008G146900 Sobic008G146900 Sobic004G181700--Sobic008G146900 Sobic001G191600 Sobic001G191600 Sobic004G181700--Sobic001G191600 Sobic009G097200 Sobic009G097200 Sobic004G181700--Sobic009G097200 Sobic006G086500 Sobic006G086500 Sobic004G181700--Sobic006G086500 Sobic008G172300 Sobic008G172300 Sobic004G181700--Sobic008G172300 Sobic001G498600--Sobic010G112000 Sobic006G131500 Sobic006G131500 Sobic001G498600--Sobic006G131500 Sobic001G146800 Sobic001G146800 Sobic001G498600--Sobic001G146800 Sobic005G008800 Sobic005G008800 Sobic001G498600--Sobic005G008800 Sobic002G134200 Sobic002G134200 Sobic001G498600--Sobic002G134200 Sobic001G058700 Sobic001G058700 Sobic001G498600--Sobic001G058700 Sobic001G498600--Sobic004G317100 Sobic001G498600--Sobic007G193700 Sobic007G172400 Sobic007G172400 Sobic001G498600--Sobic007G172400 Sobic003G359600--Sobic004G317100 Sobic003G359600--Sobic002G134200 Sobic003G359600--Sobic007G193700 Sobic006G182900 Sobic006G182900 Sobic003G359600--Sobic006G182900 Sobic003G280800 Sobic003G280800 Sobic003G359600--Sobic003G280800 Sobic006G220000 Sobic006G220000 Sobic003G359600--Sobic006G220000 Sobic003G359600--Sobic001G365900 Sobic007G161000 Sobic007G161000 Sobic003G359600--Sobic007G161000 Sobic010G143800 Sobic010G143800 Sobic003G359600--Sobic010G143800 Sobic004G263600 Sobic004G263600 Sobic007G193700--Sobic004G263600 Sobic003G086900 Sobic003G086900 Sobic007G193700--Sobic003G086900 Sobic004G200200 Sobic004G200200 Sobic007G193700--Sobic004G200200 Sobic004G174200 Sobic004G174200 Sobic007G193700--Sobic004G174200 Sobic007G193700--Sobic002G134200 Sobic010G239600 Sobic010G239600 Sobic007G193700--Sobic010G239600 Sobic003G139900 Sobic003G139900 Sobic007G193700--Sobic003G139900 Sobic003G247500 Sobic003G247500 Sobic007G193700--Sobic003G247500 Sobic003G396200 Sobic003G396200 Sobic007G193700--Sobic003G396200 Sobic003G381200 Sobic003G381200 Sobic001G159400--Sobic003G381200 Sobic003G138500 Sobic003G138500 Sobic001G159400--Sobic003G138500 Sobic001G090500 Sobic001G090500 Sobic001G159400--Sobic001G090500 Sobic001G159400--Sobic010G256700 Sobic001G159400--Sobic007G193700 Sobic001G159400--Sobic002G276100 Sobic001G159400--Sobic003G396200 Sobic001G159400--Sobic004G181700 Sobic001G159400--Sobic004G317100 Sobic007G116200 Sobic007G116200 Sobic010G256700--Sobic007G116200 Sobic010G256700--Sobic003G396200 Sobic010G256700--Sobic006G182900 Sobic010G256700--Sobic001G159400 Sobic010G248700 Sobic010G248700 Sobic010G256700--Sobic010G248700 Sobic010G256700--Sobic007G193700 Sobic006G133900 Sobic006G133900 Sobic010G256700--Sobic006G133900 Sobic001G454500 Sobic001G454500 Sobic010G256700--Sobic001G454500 Sobic002G104100 Sobic002G104100 Sobic010G256700--Sobic002G104100 Sobic010G206900 Sobic010G206900 Sobic001G365900--Sobic010G206900 Sobic001G534700 Sobic001G534700 Sobic001G365900--Sobic001G534700 Sobic001G289600 Sobic001G289600 Sobic001G365900--Sobic001G289600 Sobic008G130100 Sobic008G130100 Sobic001G365900--Sobic008G130100 Sobic002G411600 Sobic002G411600 Sobic001G365900--Sobic002G411600 Sobic002G008900 Sobic002G008900 Sobic001G365900--Sobic002G008900 Sobic009G191000 Sobic009G191000 Sobic001G365900--Sobic009G191000 Sobic004G034900 Sobic004G034900 Sobic001G365900--Sobic004G034900 Sobic001G540400 Sobic001G540400 Sobic001G365900--Sobic001G540400 Sobic010G112000--Sobic001G498600 Sobic010G112000--Sobic004G034900 Sobic010G112000--Sobic002G008900 Sobic010G112000--Sobic001G540400 Sobic010G112000--Sobic001G289600 Sobic010G112000--Sobic001G146800 Sobic010G112000--Sobic005G008800 Sobic001G280900 Sobic001G280900 Sobic010G112000--Sobic001G280900 Sobic010G112000--Sobic001G058700 Sobic002G173000--Sobic006G182900 Sobic001G214300 Sobic001G214300 Sobic002G173000--Sobic001G214300 Sobic005G032800 Sobic005G032800 Sobic002G173000--Sobic005G032800 Sobic006G021250 Sobic006G021250 Sobic002G173000--Sobic006G021250 Sobic002G173000--Sobic010G248700 Sobic008G027000 Sobic008G027000 Sobic002G173000--Sobic008G027000 Sobic001G287201 Sobic001G287201 Sobic002G173000--Sobic001G287201 Sobic001G318432 Sobic001G318432 Sobic002G173000--Sobic001G318432 Sobic001G474600 Sobic001G474600 Sobic002G173000--Sobic001G474600
Octagon: transcription factors


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