Gene annotation
Transcriptome id Sobic.001G530500.1
Synonym Sb01g049340
Functional annotation per1-like family protein, putative, expressed
UniProt C5X0Z3
Pfam PF04080
Panther DB PTHR13148 PTHR13148:SF1
NCBI CDD KOG2970; Predicted membrane protein
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G16560 : Per1-like family protein
RAP-DB (Rice) LOC_Os10g38030.1 : per1-like family protein, putative, expressed
MaizeGDB (Corn) Zm00025a046267 , Zm00025a053520 , Zm00025a010624 , Zm00025a000250
Brachypodium KQK23969 , KQK23968
Barley HORVU4Hr1G085860.3 , HORVU4Hr1G085860.2 , HORVU4Hr1G085860.1 , HORVU4Hr1G085860.4
Wheat TraesCS4B02G353500
Populus -


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cDNA sequences
Sobic.001G530500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G365800 glutathione peroxidase domain containing protein, expressed K00432: gpx, btuE, glutathione peroxidase
2 Sobic.003G048500 acyl-protein thioesterase, putative, expressed K06130: lysophospholipase II
3 Sobic.009G162600 OsFtsH8 FtsH protease, homologue of AtFtsH3/10, expressed K08956: AFG3 family protein
4 Sobic.003G340600 VHS and GAT domain containing protein, expressed -
5 Sobic.004G121100 expressed protein -
6 Sobic.010G092300 N-rich protein, putative, expressed -
7 Sobic.003G081700 OsWAK1 - OsWAK receptor-like cytoplasmic kinase OsWAK-RLCK, expressed -
8 Sobic.001G048100 OsAPRL5 adenosine 5\'-phosphosulfate reductase-like OsAPRL5, expressed -
9 Sobic.003G327100 zinc finger, C3HC4 type domain containing protein, expressed K11982: E3 ubiquitin-protein ligase RNF115/126
10 Sobic.007G078500 serine/threonine-protein kinase HT1, putative, expressed -
11 Sobic.006G209400 protein phosphatase 2C, putative, expressed K17506: PPM1L, protein phosphatase 1L
12 Sobic.007G019800 expressed protein -
13 Sobic.009G101400 "Phylogenetic analysis of canonical DREB1 and DREB2 genes in sorghum with those genes in maize, rice, and Arabidopsis. "(PubMedID : 24086146)@Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed -
14 Sobic.003G103200 pex14, putative, expressed K13343: peroxin-14
15 Sobic.008G172300 peroxisome assembly protein, putative, expressed K06664: PEX2, peroxin-2
16 Sobic.006G119800 leucine rich repeat containing protein, expressed -
17 Sobic.002G290400 Protein kinase superfamily protein(PubMedID : 26465154)@serine/threonine-protein kinase SRPK1, putative, expressed -
18 Sobic.003G370900 expressed protein -
19 Sobic.008G076800 expressed protein -
20 Sobic.002G104100 FYVE zinc finger domain containing protein, expressed -


Gene co-expression network
sample Sobic001G530500 Sobic001G530500 Sobic001G365800 Sobic001G365800 Sobic001G530500--Sobic001G365800 Sobic003G048500 Sobic003G048500 Sobic001G530500--Sobic003G048500 Sobic009G162600 Sobic009G162600 Sobic001G530500--Sobic009G162600 Sobic003G340600 Sobic003G340600 Sobic001G530500--Sobic003G340600 Sobic004G121100 Sobic004G121100 Sobic001G530500--Sobic004G121100 Sobic010G092300 Sobic010G092300 Sobic001G530500--Sobic010G092300 Sobic003G081700 Sobic003G081700 Sobic001G530500--Sobic003G081700 Sobic001G048100 Sobic001G048100 Sobic001G530500--Sobic001G048100 Sobic003G327100 Sobic003G327100 Sobic001G530500--Sobic003G327100 Sobic002G352600 Sobic002G352600 Sobic001G365800--Sobic002G352600 Sobic007G007000 Sobic007G007000 Sobic001G365800--Sobic007G007000 Sobic009G149300 Sobic009G149300 Sobic001G365800--Sobic009G149300 Sobic003G010400 Sobic003G010400 Sobic001G365800--Sobic003G010400 Sobic001G365800--Sobic001G530500 Sobic006G119800 Sobic006G119800 Sobic001G365800--Sobic006G119800 Sobic001G294200 Sobic001G294200 Sobic001G365800--Sobic001G294200 Sobic010G000900 Sobic010G000900 Sobic001G365800--Sobic010G000900 Sobic006G194500 Sobic006G194500 Sobic001G365800--Sobic006G194500 Sobic003G048500--Sobic001G048100 Sobic001G031100 Sobic001G031100 Sobic003G048500--Sobic001G031100 Sobic003G048500--Sobic001G530500 Sobic002G288200 Sobic002G288200 Sobic003G048500--Sobic002G288200 Sobic003G264200 Sobic003G264200 Sobic003G048500--Sobic003G264200 Sobic009G229200 Sobic009G229200 Sobic003G048500--Sobic009G229200 Sobic003G048500--Sobic003G010400 Sobic003G048500--Sobic003G327100 Sobic003G048500--Sobic010G092300 Sobic009G162600--Sobic003G340600 Sobic002G349100 Sobic002G349100 Sobic009G162600--Sobic002G349100 Sobic009G103000 Sobic009G103000 Sobic009G162600--Sobic009G103000 Sobic002G072400 Sobic002G072400 Sobic009G162600--Sobic002G072400 Sobic002G275100 Sobic002G275100 Sobic009G162600--Sobic002G275100 Sobic003G105900 Sobic003G105900 Sobic009G162600--Sobic003G105900 Sobic008G089900 Sobic008G089900 Sobic009G162600--Sobic008G089900 Sobic004G300100 Sobic004G300100 Sobic009G162600--Sobic004G300100 Sobic003G029500 Sobic003G029500 Sobic009G162600--Sobic003G029500 Sobic008G172300 Sobic008G172300 Sobic003G340600--Sobic008G172300 Sobic003G221900 Sobic003G221900 Sobic003G340600--Sobic003G221900 Sobic002G167500 Sobic002G167500 Sobic003G340600--Sobic002G167500 Sobic003G340600--Sobic010G092300 Sobic003G398700 Sobic003G398700 Sobic003G340600--Sobic003G398700 Sobic003G340600--Sobic009G162600 Sobic004G181600 Sobic004G181600 Sobic003G340600--Sobic004G181600 Sobic010G013200 Sobic010G013200 Sobic003G340600--Sobic010G013200 Sobic006G086500 Sobic006G086500 Sobic003G340600--Sobic006G086500 Sobic009G205200 Sobic009G205200 Sobic004G121100--Sobic009G205200 Sobic006G200600 Sobic006G200600 Sobic004G121100--Sobic006G200600 Sobic006G228500 Sobic006G228500 Sobic004G121100--Sobic006G228500 Sobic001G281600 Sobic001G281600 Sobic004G121100--Sobic001G281600 Sobic009G259400 Sobic009G259400 Sobic004G121100--Sobic009G259400 Sobic007G078500 Sobic007G078500 Sobic004G121100--Sobic007G078500 Sobic001G080700 Sobic001G080700 Sobic004G121100--Sobic001G080700 Sobic002G350300 Sobic002G350300 Sobic004G121100--Sobic002G350300 Sobic010G251000 Sobic010G251000 Sobic004G121100--Sobic010G251000 Sobic010G092300--Sobic003G340600 Sobic005G160400 Sobic005G160400 Sobic010G092300--Sobic005G160400 Sobic010G265300 Sobic010G265300 Sobic010G092300--Sobic010G265300 Sobic010G092300--Sobic003G264200 Sobic010G092300--Sobic002G167500 Sobic001G019800 Sobic001G019800 Sobic010G092300--Sobic001G019800 Sobic010G092300--Sobic009G162600 Sobic010G092300--Sobic007G078500 Sobic010G092300--Sobic001G080700 Sobic008G146900 Sobic008G146900 Sobic003G081700--Sobic008G146900 Sobic001G159400 Sobic001G159400 Sobic003G081700--Sobic001G159400 Sobic002G137000 Sobic002G137000 Sobic003G081700--Sobic002G137000 Sobic004G181700 Sobic004G181700 Sobic003G081700--Sobic004G181700 Sobic010G184600 Sobic010G184600 Sobic003G081700--Sobic010G184600 Sobic003G081700--Sobic001G530500 Sobic001G106600 Sobic001G106600 Sobic003G081700--Sobic001G106600 Sobic003G081700--Sobic004G181600 Sobic001G072700 Sobic001G072700 Sobic003G081700--Sobic001G072700 Sobic001G048100--Sobic001G080700 Sobic010G184100 Sobic010G184100 Sobic001G048100--Sobic010G184100 Sobic009G165800 Sobic009G165800 Sobic001G048100--Sobic009G165800 Sobic001G048100--Sobic004G121100 Sobic007G171400 Sobic007G171400 Sobic001G048100--Sobic007G171400 Sobic001G048100--Sobic010G251000 Sobic004G040900 Sobic004G040900 Sobic001G048100--Sobic004G040900 Sobic001G048100--Sobic003G264200 Sobic004G269000 Sobic004G269000 Sobic001G048100--Sobic004G269000 Sobic006G262900 Sobic006G262900 Sobic003G327100--Sobic006G262900 Sobic001G138300 Sobic001G138300 Sobic003G327100--Sobic001G138300 Sobic009G101400 Sobic009G101400 Sobic003G327100--Sobic009G101400 Sobic003G327100--Sobic003G048500 Sobic003G327100--Sobic001G530500 Sobic003G327100--Sobic010G092300 Sobic006G198500 Sobic006G198500 Sobic003G327100--Sobic006G198500 Sobic001G208300 Sobic001G208300 Sobic003G327100--Sobic001G208300 Sobic003G327100--Sobic001G294200
Octagon: transcription factors


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