Gene annotation
Transcriptome id Sobic.003G048500.1,Sobic.003G048500.2
Synonym Sb03g004220
Functional annotation acyl-protein thioesterase, putative, expressed
UniProt A0A1B6Q1I8
Pfam PF12695
Panther DB PTHR10655 PTHR10655:SF34
NCBI CDD KOG2112; Lysophospholipase
KEGG Orthology K06130; lysophospholipase II
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G20060 : alpha/beta-Hydrolases superfamily protein
RAP-DB (Rice) LOC_Os01g07960.2 : acyl-protein thioesterase, putative, expressed
MaizeGDB (Corn) Zm00025a035734 , Zm00025a023225
Brachypodium PNT70054 , PNT70053
Barley HORVU3Hr1G023960.4 , HORVU3Hr1G023960.1 , HORVU3Hr1G023960.3 , HORVU3Hr1G023960.2 , HORVU3Hr1G023960.5 , HORVU3Hr1G023960.7 , HORVU3Hr1G023960.6 , HORVU3Hr1G023960.9 , HORVU3Hr1G023960.8
Wheat TraesCS3A02G127800 , TraesCS3A02G127800 , TraesCS3B02G147000 , TraesCS3B02G147000 , TraesCS3D02G128800 , TraesCS3D02G128800
Populus -


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cDNA sequences
Sobic.003G048500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G048100 OsAPRL5 adenosine 5\'-phosphosulfate reductase-like OsAPRL5, expressed -
2 Sobic.001G031100 dolichyl-phosphate beta-glycosyltransferase, putative, expressed K00721: dolichol-phosphate mannosyltransferase
3 Sobic.001G530500 per1-like family protein, putative, expressed -
4 Sobic.002G288200 expressed protein -
5 Sobic.003G264200 Ser/Thr protein phosphatase family protein, putative, expressed K15498: serine/threonine-protein phosphatase 6 catalytic subunit
6 Sobic.009G229200 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in root, expression induced by IAA and BR treatments"(PubMedID : 20499123)@OsIAA19 - Auxin-responsive Aux/IAA gene family member, expressed K14484: auxin-responsive protein IAA
7 Sobic.003G010400 ras-related protein, putative, expressed K07897: Ras-related protein Rab-7A
8 Sobic.003G327100 zinc finger, C3HC4 type domain containing protein, expressed K11982: E3 ubiquitin-protein ligase RNF115/126
9 Sobic.010G092300 N-rich protein, putative, expressed -
10 Sobic.006G212100 expressed protein -
11 Sobic.008G046500 Cellular calcium signals(PubMedID : 19860013)@calcineurin B, putative, expressed K06268: PPP3R, serine/threonine-protein phosphatase 2B regulatory subunit
12 Sobic.007G019800 expressed protein -
13 Sobic.007G005300 RING finger protein 13, putative, expressed K15692: RNF13, E3 ubiquitin-protein ligase RNF13
14 Sobic.003G370500 hydrolase, alpha/beta fold family domain containing protein, expressed K07019: uncharacterized protein
15 Sobic.002G054300 ABC transporter, ATP-binding protein, putative, expressed K06184: ATP-binding cassette, subfamily F, member 1
16 Sobic.010G184100 mitochondrial carrier protein, putative, expressed -
17 Sobic.003G316700 katanin p80 WD40 repeat-containing subunit B1 homolog 1, putative, expressed K18643: katanin p80 WD40 repeat-containing subunit B1
18 Sobic.002G301000 zinc finger, C3HC4 type, domain containing protein, expressed -
19 Sobic.001G391600 plant neutral invertase domain containing protein, expressed -
20 Sobic.010G265300 AAA-type ATPase family protein, putative, expressed -


Gene co-expression network
sample Sobic003G048500 Sobic003G048500 Sobic001G048100 Sobic001G048100 Sobic003G048500--Sobic001G048100 Sobic001G031100 Sobic001G031100 Sobic003G048500--Sobic001G031100 Sobic001G530500 Sobic001G530500 Sobic003G048500--Sobic001G530500 Sobic002G288200 Sobic002G288200 Sobic003G048500--Sobic002G288200 Sobic003G264200 Sobic003G264200 Sobic003G048500--Sobic003G264200 Sobic009G229200 Sobic009G229200 Sobic003G048500--Sobic009G229200 Sobic003G010400 Sobic003G010400 Sobic003G048500--Sobic003G010400 Sobic003G327100 Sobic003G327100 Sobic003G048500--Sobic003G327100 Sobic010G092300 Sobic010G092300 Sobic003G048500--Sobic010G092300 Sobic001G080700 Sobic001G080700 Sobic001G048100--Sobic001G080700 Sobic010G184100 Sobic010G184100 Sobic001G048100--Sobic010G184100 Sobic009G165800 Sobic009G165800 Sobic001G048100--Sobic009G165800 Sobic004G121100 Sobic004G121100 Sobic001G048100--Sobic004G121100 Sobic007G171400 Sobic007G171400 Sobic001G048100--Sobic007G171400 Sobic010G251000 Sobic010G251000 Sobic001G048100--Sobic010G251000 Sobic004G040900 Sobic004G040900 Sobic001G048100--Sobic004G040900 Sobic001G048100--Sobic003G264200 Sobic004G269000 Sobic004G269000 Sobic001G048100--Sobic004G269000 Sobic009G192000 Sobic009G192000 Sobic001G031100--Sobic009G192000 Sobic001G031100--Sobic003G264200 Sobic001G007000 Sobic001G007000 Sobic001G031100--Sobic001G007000 Sobic004G054100 Sobic004G054100 Sobic001G031100--Sobic004G054100 Sobic002G047700 Sobic002G047700 Sobic001G031100--Sobic002G047700 Sobic009G222500 Sobic009G222500 Sobic001G031100--Sobic009G222500 Sobic001G031100--Sobic001G080700 Sobic009G068500 Sobic009G068500 Sobic001G031100--Sobic009G068500 Sobic001G031100--Sobic010G251000 Sobic001G365800 Sobic001G365800 Sobic001G530500--Sobic001G365800 Sobic001G530500--Sobic003G048500 Sobic009G162600 Sobic009G162600 Sobic001G530500--Sobic009G162600 Sobic003G340600 Sobic003G340600 Sobic001G530500--Sobic003G340600 Sobic001G530500--Sobic004G121100 Sobic001G530500--Sobic010G092300 Sobic003G081700 Sobic003G081700 Sobic001G530500--Sobic003G081700 Sobic001G530500--Sobic001G048100 Sobic001G530500--Sobic003G327100 Sobic007G005300 Sobic007G005300 Sobic002G288200--Sobic007G005300 Sobic002G288200--Sobic003G048500 Sobic006G212100 Sobic006G212100 Sobic002G288200--Sobic006G212100 Sobic003G212500 Sobic003G212500 Sobic002G288200--Sobic003G212500 Sobic002G047500 Sobic002G047500 Sobic002G288200--Sobic002G047500 Sobic001G294900 Sobic001G294900 Sobic002G288200--Sobic001G294900 Sobic001G112400 Sobic001G112400 Sobic002G288200--Sobic001G112400 Sobic001G512400 Sobic001G512400 Sobic002G288200--Sobic001G512400 Sobic002G194100 Sobic002G194100 Sobic002G288200--Sobic002G194100 Sobic003G264200--Sobic001G031100 Sobic003G264200--Sobic001G080700 Sobic007G166400 Sobic007G166400 Sobic003G264200--Sobic007G166400 Sobic003G264200--Sobic009G222500 Sobic006G049700 Sobic006G049700 Sobic003G264200--Sobic006G049700 Sobic006G101700 Sobic006G101700 Sobic003G264200--Sobic006G101700 Sobic003G264200--Sobic002G047700 Sobic003G264200--Sobic009G165800 Sobic007G166100 Sobic007G166100 Sobic003G264200--Sobic007G166100 Sobic002G134001 Sobic002G134001 Sobic009G229200--Sobic002G134001 Sobic004G203400 Sobic004G203400 Sobic009G229200--Sobic004G203400 Sobic009G229200--Sobic003G264200 Sobic009G229200--Sobic009G165800 Sobic001G391600 Sobic001G391600 Sobic009G229200--Sobic001G391600 Sobic009G005900 Sobic009G005900 Sobic009G229200--Sobic009G005900 Sobic004G130100 Sobic004G130100 Sobic009G229200--Sobic004G130100 Sobic009G229200--Sobic003G010400 Sobic009G174900 Sobic009G174900 Sobic009G229200--Sobic009G174900 Sobic002G161800 Sobic002G161800 Sobic003G010400--Sobic002G161800 Sobic008G046500 Sobic008G046500 Sobic003G010400--Sobic008G046500 Sobic003G010400--Sobic003G264200 Sobic003G010400--Sobic010G251000 Sobic007G019800 Sobic007G019800 Sobic003G010400--Sobic007G019800 Sobic003G010400--Sobic009G005900 Sobic010G068500 Sobic010G068500 Sobic003G010400--Sobic010G068500 Sobic003G010400--Sobic001G080700 Sobic003G010400--Sobic001G007000 Sobic006G262900 Sobic006G262900 Sobic003G327100--Sobic006G262900 Sobic001G138300 Sobic001G138300 Sobic003G327100--Sobic001G138300 Sobic009G101400 Sobic009G101400 Sobic003G327100--Sobic009G101400 Sobic003G327100--Sobic003G048500 Sobic003G327100--Sobic001G530500 Sobic003G327100--Sobic010G092300 Sobic006G198500 Sobic006G198500 Sobic003G327100--Sobic006G198500 Sobic001G208300 Sobic001G208300 Sobic003G327100--Sobic001G208300 Sobic001G294200 Sobic001G294200 Sobic003G327100--Sobic001G294200 Sobic010G092300--Sobic003G340600 Sobic005G160400 Sobic005G160400 Sobic010G092300--Sobic005G160400 Sobic010G265300 Sobic010G265300 Sobic010G092300--Sobic010G265300 Sobic010G092300--Sobic003G264200 Sobic002G167500 Sobic002G167500 Sobic010G092300--Sobic002G167500 Sobic001G019800 Sobic001G019800 Sobic010G092300--Sobic001G019800 Sobic010G092300--Sobic009G162600 Sobic007G078500 Sobic007G078500 Sobic010G092300--Sobic007G078500 Sobic010G092300--Sobic001G080700
Octagon: transcription factors


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