Gene annotation
Transcriptome id Sobic.002G288200.1,Sobic.002G288200.2
Synonym Sb02g032030
Functional annotation expressed protein
UniProt A0A1B6QDZ3 , A0A1B6QDY4
Pfam PF04420
Panther DB PTHR11760 PTHR11760:SF21
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G16444 : -
RAP-DB (Rice) LOC_Os06g09840.1 : expressed protein
MaizeGDB (Corn) Zm00025a047962
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.002G288200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G005300 RING finger protein 13, putative, expressed K15692: RNF13, E3 ubiquitin-protein ligase RNF13
2 Sobic.003G048500 acyl-protein thioesterase, putative, expressed K06130: lysophospholipase II
3 Sobic.006G212100 expressed protein -
4 Sobic.003G212500 heat shock protein DnaJ, putative, expressed K04082: hscB, HSCB, molecular chaperone HscB
5 Sobic.002G047500 galactose-1-phosphate uridyl transferase, putative, expressed K00965: galT, UDPglucose--hexose-1-phosphate uridylyltransferase
6 Sobic.001G294900 KH domain containing protein, putative, expressed K13162: poly(rC)-binding protein 2
7 Sobic.001G112400 cytochrome c oxidase assembly protein COX11, mitochondrial precursor, putative, expressed K02258: COX11, cytochrome c oxidase assembly protein subunit 11
8 Sobic.001G512400 expressed protein -
9 Sobic.002G194100 annexin, putative, expressed K17095: annexin A7/11
10 Sobic.003G370500 hydrolase, alpha/beta fold family domain containing protein, expressed K07019: uncharacterized protein
11 Sobic.002G396700 NADH-ubiquinone oxidoreductase 51 kDa subunit, mitochondrial precursor, putative, expressed K03942: NADH dehydrogenase (ubiquinone) flavoprotein 1
12 Sobic.001G323300 ethylene-responsive element-binding protein, putative, expressed -
13 Sobic.001G428800 vacuolar sorting protein, putative, expressed -
14 Sobic.003G349300 serine/threonine-protein kinase AFC1, putative, expressed K08287: dual-specificity kinase
15 Sobic.010G188200 SFT2, putative, expressed -
16 Sobic.004G224800 ubiquitin-conjugating enzyme, putative, expressed K10689: peroxin-4
17 Sobic.003G314100 AGAP000951-PA, putative, expressed -
18 Sobic.001G014200 protein kinase domain containing protein, expressed K08829: male germ cell-associated kinase
19 Sobic.001G491100 structural constituent of ribosome, putative, expressed K02911: RP-L32, MRPL32, large subunit ribosomal protein L32
20 Sobic.006G263900 ubiquinone biosynthesis protein COQ4, putative, expressed K18586: ubiquinone biosynthesis protein COQ4


Gene co-expression network
sample Sobic002G288200 Sobic002G288200 Sobic007G005300 Sobic007G005300 Sobic002G288200--Sobic007G005300 Sobic003G048500 Sobic003G048500 Sobic002G288200--Sobic003G048500 Sobic006G212100 Sobic006G212100 Sobic002G288200--Sobic006G212100 Sobic003G212500 Sobic003G212500 Sobic002G288200--Sobic003G212500 Sobic002G047500 Sobic002G047500 Sobic002G288200--Sobic002G047500 Sobic001G294900 Sobic001G294900 Sobic002G288200--Sobic001G294900 Sobic001G112400 Sobic001G112400 Sobic002G288200--Sobic001G112400 Sobic001G512400 Sobic001G512400 Sobic002G288200--Sobic001G512400 Sobic002G194100 Sobic002G194100 Sobic002G288200--Sobic002G194100 Sobic007G005300--Sobic002G288200 Sobic003G370500 Sobic003G370500 Sobic007G005300--Sobic003G370500 Sobic001G031100 Sobic001G031100 Sobic007G005300--Sobic001G031100 Sobic001G019800 Sobic001G019800 Sobic007G005300--Sobic001G019800 Sobic001G207500 Sobic001G207500 Sobic007G005300--Sobic001G207500 Sobic010G092300 Sobic010G092300 Sobic007G005300--Sobic010G092300 Sobic007G061400 Sobic007G061400 Sobic007G005300--Sobic007G061400 Sobic010G265300 Sobic010G265300 Sobic007G005300--Sobic010G265300 Sobic007G005300--Sobic003G212500 Sobic001G048100 Sobic001G048100 Sobic003G048500--Sobic001G048100 Sobic003G048500--Sobic001G031100 Sobic001G530500 Sobic001G530500 Sobic003G048500--Sobic001G530500 Sobic003G048500--Sobic002G288200 Sobic003G264200 Sobic003G264200 Sobic003G048500--Sobic003G264200 Sobic009G229200 Sobic009G229200 Sobic003G048500--Sobic009G229200 Sobic003G010400 Sobic003G010400 Sobic003G048500--Sobic003G010400 Sobic003G327100 Sobic003G327100 Sobic003G048500--Sobic003G327100 Sobic003G048500--Sobic010G092300 Sobic001G054200 Sobic001G054200 Sobic006G212100--Sobic001G054200 Sobic009G198500 Sobic009G198500 Sobic006G212100--Sobic009G198500 Sobic001G314500 Sobic001G314500 Sobic006G212100--Sobic001G314500 Sobic006G263900 Sobic006G263900 Sobic006G212100--Sobic006G263900 Sobic002G400000 Sobic002G400000 Sobic006G212100--Sobic002G400000 Sobic007G168600 Sobic007G168600 Sobic006G212100--Sobic007G168600 Sobic009G174900 Sobic009G174900 Sobic006G212100--Sobic009G174900 Sobic010G083700 Sobic010G083700 Sobic006G212100--Sobic010G083700 Sobic001G005900 Sobic001G005900 Sobic006G212100--Sobic001G005900 Sobic003G212500--Sobic007G005300 Sobic003G212500--Sobic002G288200 Sobic004G115350 Sobic004G115350 Sobic003G212500--Sobic004G115350 Sobic009G192000 Sobic009G192000 Sobic003G212500--Sobic009G192000 Sobic001G524500 Sobic001G524500 Sobic003G212500--Sobic001G524500 Sobic001G105500 Sobic001G105500 Sobic003G212500--Sobic001G105500 Sobic001G512300 Sobic001G512300 Sobic003G212500--Sobic001G512300 Sobic004G307600 Sobic004G307600 Sobic003G212500--Sobic004G307600 Sobic003G212500--Sobic001G031100 Sobic007G028500 Sobic007G028500 Sobic002G047500--Sobic007G028500 Sobic008G087900 Sobic008G087900 Sobic002G047500--Sobic008G087900 Sobic001G014200 Sobic001G014200 Sobic002G047500--Sobic001G014200 Sobic002G047500--Sobic003G370500 Sobic006G039400 Sobic006G039400 Sobic002G047500--Sobic006G039400 Sobic008G048300 Sobic008G048300 Sobic002G047500--Sobic008G048300 Sobic007G076400 Sobic007G076400 Sobic002G047500--Sobic007G076400 Sobic007G087000 Sobic007G087000 Sobic002G047500--Sobic007G087000 Sobic004G054100 Sobic004G054100 Sobic002G047500--Sobic004G054100 Sobic008G137600 Sobic008G137600 Sobic001G294900--Sobic008G137600 Sobic003G349300 Sobic003G349300 Sobic001G294900--Sobic003G349300 Sobic006G225300 Sobic006G225300 Sobic001G294900--Sobic006G225300 Sobic001G439600 Sobic001G439600 Sobic001G294900--Sobic001G439600 Sobic006G183000 Sobic006G183000 Sobic001G294900--Sobic006G183000 Sobic002G129000 Sobic002G129000 Sobic001G294900--Sobic002G129000 Sobic001G458700 Sobic001G458700 Sobic001G294900--Sobic001G458700 Sobic009G135600 Sobic009G135600 Sobic001G294900--Sobic009G135600 Sobic006G109700 Sobic006G109700 Sobic001G294900--Sobic006G109700 Sobic002G262200 Sobic002G262200 Sobic001G112400--Sobic002G262200 Sobic001G443200 Sobic001G443200 Sobic001G112400--Sobic001G443200 Sobic005G184200 Sobic005G184200 Sobic001G112400--Sobic005G184200 Sobic001G378200 Sobic001G378200 Sobic001G112400--Sobic001G378200 Sobic004G347600 Sobic004G347600 Sobic001G112400--Sobic004G347600 Sobic004G039400 Sobic004G039400 Sobic001G112400--Sobic004G039400 Sobic004G344800 Sobic004G344800 Sobic001G112400--Sobic004G344800 Sobic002G396700 Sobic002G396700 Sobic001G112400--Sobic002G396700 Sobic001G465400 Sobic001G465400 Sobic001G112400--Sobic001G465400 Sobic001G313500 Sobic001G313500 Sobic001G512400--Sobic001G313500 Sobic001G512400--Sobic009G135600 Sobic002G040700 Sobic002G040700 Sobic001G512400--Sobic002G040700 Sobic001G512400--Sobic006G263900 Sobic001G421400 Sobic001G421400 Sobic001G512400--Sobic001G421400 Sobic008G165000 Sobic008G165000 Sobic001G512400--Sobic008G165000 Sobic001G161900 Sobic001G161900 Sobic001G512400--Sobic001G161900 Sobic001G512400--Sobic003G349300 Sobic010G188200 Sobic010G188200 Sobic001G512400--Sobic010G188200 Sobic001G040800 Sobic001G040800 Sobic002G194100--Sobic001G040800 Sobic002G202300 Sobic002G202300 Sobic002G194100--Sobic002G202300 Sobic006G232200 Sobic006G232200 Sobic002G194100--Sobic006G232200 Sobic004G293700 Sobic004G293700 Sobic002G194100--Sobic004G293700 Sobic001G459200 Sobic001G459200 Sobic002G194100--Sobic001G459200 Sobic002G194100--Sobic001G054200 Sobic004G248800 Sobic004G248800 Sobic002G194100--Sobic004G248800 Sobic003G253000 Sobic003G253000 Sobic002G194100--Sobic003G253000 Sobic004G079100 Sobic004G079100 Sobic002G194100--Sobic004G079100
Octagon: transcription factors


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