Gene annotation
Transcriptome id Sobic.003G212500.1
Synonym Sb03g027220
Functional annotation heat shock protein DnaJ, putative, expressed
UniProt C5XQB2
Pfam PF07743
Panther DB PTHR14021 PTHR14021:SF15
NCBI CDD KOG3192; Mitochondrial J-type chaperone
KEGG Orthology K04082; hscB, HSCB, molecular chaperone HscB
Gene Ontology GO:0006457; protein folding


Orthologs (automatic annotation)
TAIR AT5G06410 : DNAJ heat shock N-terminal domain-containing protein
RAP-DB (Rice) LOC_Os12g27070.1 : heat shock protein DnaJ, putative, expressed
MaizeGDB (Corn) Zm00025a028639
Brachypodium KQJ86798
Barley HORVU7Hr1G043340.9 , HORVU7Hr1G043340.8 , HORVU7Hr1G043340.7 , HORVU7Hr1G043340.6 , HORVU7Hr1G043340.5 , HORVU7Hr1G043340.4 , HORVU7Hr1G043340.3 , HORVU7Hr1G043340.2 , HORVU7Hr1G043340.1
Wheat TraesCS7D02G216000 , TraesCS7D02G216000 , TraesCS7D02G216000 , TraesCS7A02G213900 , TraesCS7B02G121200
Populus -


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cDNA sequences
Sobic.003G212500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G005300 RING finger protein 13, putative, expressed K15692: RNF13, E3 ubiquitin-protein ligase RNF13
2 Sobic.002G288200 expressed protein -
3 Sobic.004G115350 - K12843: PRPF3, U4/U6 small nuclear ribonucleoprotein PRP3
4 Sobic.009G192000 transcription initiation factor IIF beta subunit, putative, expressed K03139: TFIIF2, GTF2F2, transcription initiation factor TFIIF subunit beta
5 Sobic.001G524500 haloacid dehalogenase-like hydrolase domain-containing protein 1A, putative, expressed K00861: RFK, riboflavin kinase
6 Sobic.001G105500 heat shock protein DnaJ, putative, expressed -
7 Sobic.001G512300 outer mitochondrial membrane porin, putative, expressed K15040: voltage-dependent anion channel protein 2
8 Sobic.004G307600 ATP-binding domain-containing protein, putative, expressed K14168: CTU1, cytoplasmic tRNA 2-thiolation protein 1
9 Sobic.001G031100 dolichyl-phosphate beta-glycosyltransferase, putative, expressed K00721: dolichol-phosphate mannosyltransferase
10 Sobic.001G358000 Putative splicing factor(PubMedID : 24356560)@RNA recognition motif containing protein, putative, expressed K12900: FUS-interacting serine-arginine-rich protein 1
11 Sobic.010G235200 oral cancer overexpressed protein 1, putative, expressed -
12 Sobic.010G184100 mitochondrial carrier protein, putative, expressed -
13 Sobic.003G349300 serine/threonine-protein kinase AFC1, putative, expressed K08287: dual-specificity kinase
14 Sobic.003G048500 acyl-protein thioesterase, putative, expressed K06130: lysophospholipase II
15 Sobic.007G167900 signal peptide peptidase domain containing protein, expressed K09598: signal peptide peptidase-like 3
16 Sobic.007G140400 CAF1 family ribonuclease containing protein, putative, expressed K01148: PARN, poly(A)-specific ribonuclease
17 Sobic.004G289800 expressed protein -
18 Sobic.007G118000 double-stranded RNA binding motif containing protein, expressed -
19 Sobic.010G265300 AAA-type ATPase family protein, putative, expressed -
20 Sobic.001G391600 plant neutral invertase domain containing protein, expressed -


Gene co-expression network
sample Sobic003G212500 Sobic003G212500 Sobic007G005300 Sobic007G005300 Sobic003G212500--Sobic007G005300 Sobic002G288200 Sobic002G288200 Sobic003G212500--Sobic002G288200 Sobic004G115350 Sobic004G115350 Sobic003G212500--Sobic004G115350 Sobic009G192000 Sobic009G192000 Sobic003G212500--Sobic009G192000 Sobic001G524500 Sobic001G524500 Sobic003G212500--Sobic001G524500 Sobic001G105500 Sobic001G105500 Sobic003G212500--Sobic001G105500 Sobic001G512300 Sobic001G512300 Sobic003G212500--Sobic001G512300 Sobic004G307600 Sobic004G307600 Sobic003G212500--Sobic004G307600 Sobic001G031100 Sobic001G031100 Sobic003G212500--Sobic001G031100 Sobic007G005300--Sobic002G288200 Sobic003G370500 Sobic003G370500 Sobic007G005300--Sobic003G370500 Sobic007G005300--Sobic001G031100 Sobic001G019800 Sobic001G019800 Sobic007G005300--Sobic001G019800 Sobic001G207500 Sobic001G207500 Sobic007G005300--Sobic001G207500 Sobic010G092300 Sobic010G092300 Sobic007G005300--Sobic010G092300 Sobic007G061400 Sobic007G061400 Sobic007G005300--Sobic007G061400 Sobic010G265300 Sobic010G265300 Sobic007G005300--Sobic010G265300 Sobic007G005300--Sobic003G212500 Sobic002G288200--Sobic007G005300 Sobic003G048500 Sobic003G048500 Sobic002G288200--Sobic003G048500 Sobic006G212100 Sobic006G212100 Sobic002G288200--Sobic006G212100 Sobic002G288200--Sobic003G212500 Sobic002G047500 Sobic002G047500 Sobic002G288200--Sobic002G047500 Sobic001G294900 Sobic001G294900 Sobic002G288200--Sobic001G294900 Sobic001G112400 Sobic001G112400 Sobic002G288200--Sobic001G112400 Sobic001G512400 Sobic001G512400 Sobic002G288200--Sobic001G512400 Sobic002G194100 Sobic002G194100 Sobic002G288200--Sobic002G194100 Sobic004G356900 Sobic004G356900 Sobic004G115350--Sobic004G356900 Sobic006G049700 Sobic006G049700 Sobic004G115350--Sobic006G049700 Sobic009G222500 Sobic009G222500 Sobic004G115350--Sobic009G222500 Sobic004G202500 Sobic004G202500 Sobic004G115350--Sobic004G202500 Sobic006G101700 Sobic006G101700 Sobic004G115350--Sobic006G101700 Sobic003G099100 Sobic003G099100 Sobic004G115350--Sobic003G099100 Sobic003G349300 Sobic003G349300 Sobic004G115350--Sobic003G349300 Sobic008G153500 Sobic008G153500 Sobic004G115350--Sobic008G153500 Sobic010G209000 Sobic010G209000 Sobic004G115350--Sobic010G209000 Sobic009G192000--Sobic001G031100 Sobic007G167900 Sobic007G167900 Sobic009G192000--Sobic007G167900 Sobic010G020400 Sobic010G020400 Sobic009G192000--Sobic010G020400 Sobic009G192000--Sobic003G349300 Sobic001G014800 Sobic001G014800 Sobic009G192000--Sobic001G014800 Sobic003G338500 Sobic003G338500 Sobic009G192000--Sobic003G338500 Sobic006G180000 Sobic006G180000 Sobic009G192000--Sobic006G180000 Sobic010G205300 Sobic010G205300 Sobic009G192000--Sobic010G205300 Sobic003G374000 Sobic003G374000 Sobic009G192000--Sobic003G374000 Sobic005G176000 Sobic005G176000 Sobic001G524500--Sobic005G176000 Sobic004G103600 Sobic004G103600 Sobic001G524500--Sobic004G103600 Sobic009G228800 Sobic009G228800 Sobic001G524500--Sobic009G228800 Sobic006G148200 Sobic006G148200 Sobic001G524500--Sobic006G148200 Sobic003G248600 Sobic003G248600 Sobic001G524500--Sobic003G248600 Sobic002G113800 Sobic002G113800 Sobic001G524500--Sobic002G113800 Sobic004G072800 Sobic004G072800 Sobic001G524500--Sobic004G072800 Sobic005G086500 Sobic005G086500 Sobic001G524500--Sobic005G086500 Sobic001G524500--Sobic001G512300 Sobic001G031600 Sobic001G031600 Sobic001G105500--Sobic001G031600 Sobic009G219000 Sobic009G219000 Sobic001G105500--Sobic009G219000 Sobic009G193400 Sobic009G193400 Sobic001G105500--Sobic009G193400 Sobic002G040700 Sobic002G040700 Sobic001G105500--Sobic002G040700 Sobic001G391600 Sobic001G391600 Sobic001G105500--Sobic001G391600 Sobic001G541100 Sobic001G541100 Sobic001G105500--Sobic001G541100 Sobic006G225600 Sobic006G225600 Sobic001G105500--Sobic006G225600 Sobic009G050700 Sobic009G050700 Sobic001G105500--Sobic009G050700 Sobic001G323000 Sobic001G323000 Sobic001G105500--Sobic001G323000 Sobic001G091300 Sobic001G091300 Sobic001G512300--Sobic001G091300 Sobic001G512300--Sobic006G101700 Sobic002G281300 Sobic002G281300 Sobic001G512300--Sobic002G281300 Sobic001G085100 Sobic001G085100 Sobic001G512300--Sobic001G085100 Sobic009G207000 Sobic009G207000 Sobic001G512300--Sobic009G207000 Sobic001G360200 Sobic001G360200 Sobic001G512300--Sobic001G360200 Sobic009G123600 Sobic009G123600 Sobic001G512300--Sobic009G123600 Sobic004G066200 Sobic004G066200 Sobic001G512300--Sobic004G066200 Sobic003G007500 Sobic003G007500 Sobic001G512300--Sobic003G007500 Sobic010G235200 Sobic010G235200 Sobic004G307600--Sobic010G235200 Sobic004G307600--Sobic004G202500 Sobic002G303600 Sobic002G303600 Sobic004G307600--Sobic002G303600 Sobic004G307600--Sobic009G192000 Sobic008G124900 Sobic008G124900 Sobic004G307600--Sobic008G124900 Sobic004G307600--Sobic006G180000 Sobic002G117400 Sobic002G117400 Sobic004G307600--Sobic002G117400 Sobic007G093800 Sobic007G093800 Sobic004G307600--Sobic007G093800 Sobic010G223300 Sobic010G223300 Sobic004G307600--Sobic010G223300 Sobic001G031100--Sobic009G192000 Sobic003G264200 Sobic003G264200 Sobic001G031100--Sobic003G264200 Sobic001G007000 Sobic001G007000 Sobic001G031100--Sobic001G007000 Sobic004G054100 Sobic004G054100 Sobic001G031100--Sobic004G054100 Sobic002G047700 Sobic002G047700 Sobic001G031100--Sobic002G047700 Sobic001G031100--Sobic009G222500 Sobic001G080700 Sobic001G080700 Sobic001G031100--Sobic001G080700 Sobic009G068500 Sobic009G068500 Sobic001G031100--Sobic009G068500 Sobic010G251000 Sobic010G251000 Sobic001G031100--Sobic010G251000
Octagon: transcription factors


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