Gene annotation
Transcriptome id Sobic.001G524500.1,Sobic.001G524500.2
Synonym FMN/FHY, Sb01g048850, ATFMN/FHY
Functional annotation haloacid dehalogenase-like hydrolase domain-containing protein 1A, putative, expressed
UniProt A0A1Z5SC59 , C5X020
Pfam PF13419 PF01687
Panther DB PTHR22749 PTHR22749:SF1
NCBI CDD KOG3110; Riboflavin kinase
KEGG Orthology K00861; RFK, riboflavin kinase
Gene Ontology GO:0009231; riboflavin biosynthetic process GO:0008531riboflavin kinase activity


Orthologs (automatic annotation)
TAIR AT4G21470 : riboflavin kinase/FMN hydrolase
RAP-DB (Rice) LOC_Os10g32730.2 : haloacid dehalogenase-like hydrolase domain-containing protein 1A, putative, expressed
MaizeGDB (Corn) Zm00025a042374
Brachypodium KQJ84977
Barley HORVU1Hr1G038850.9 , HORVU1Hr1G038850.8 , HORVU1Hr1G038850.2 , HORVU1Hr1G038850.1 , HORVU1Hr1G038850.7 , HORVU1Hr1G038850.6 , HORVU1Hr1G038850.5 , HORVU1Hr1G038850.4 , HORVU1Hr1G038850.13 , HORVU1Hr1G038850.12 , HORVU1Hr1G038850.11 , HORVU1Hr1G038850.10
Wheat TraesCS1A02G146600 , TraesCS1D02G144800 , TraesCS1B02G164900
Populus -


JBrowse

Open New Page


cDNA sequences
Sobic.001G524500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G176000 zinc finger family protein, putative, expressed -
2 Sobic.004G103600 actin-related protein 2/3 complex subunit 3, putative, expressed K05756: actin related protein 2/3 complex, subunit 3
3 Sobic.009G228800 dolichol phosphate-mannose biosynthesis regulatory protein, putative, expressed K09658: dolichol phosphate-mannose biosynthesis regulatory protein
4 Sobic.006G148200 glycosyl transferase 8 domain containing protein, putative, expressed -
5 Sobic.003G248600 26S protease regulatory subunit 7, putative, expressed K03061: PSMC2, 26S proteasome regulatory subunit T1
6 Sobic.002G113800 spermidine synthase, putative, expressed K00797: speE, SRM, spermidine synthase
7 Sobic.004G072800 expressed protein -
8 Sobic.005G086500 clathrin adaptor complex small chain domain containing protein, expressed K11827: AP-2 complex subunit sigma-1
9 Sobic.001G512300 outer mitochondrial membrane porin, putative, expressed K15040: voltage-dependent anion channel protein 2
10 Sobic.001G073000 expressed protein K09659: dolichol-phosphate mannosyltransferase subunit 3
11 Sobic.007G118000 double-stranded RNA binding motif containing protein, expressed -
12 Sobic.003G274800 mitochondrial-processing peptidase subunit, mitochondrial precursor, putative, expressed K17732: PMPCB, mitochondrial-processing peptidase subunit beta
13 Sobic.004G212200 enhancer of rudimentary protein, putative, expressed -
14 Sobic.004G183400 expressed protein -
15 Sobic.001G033500 dolichyl-phosphate beta-glycosyltransferase, putative, expressed K00729: dolichyl-phosphate beta-glucosyltransferase
16 Sobic.010G000900 spotted leaf 11, putative, expressed -
17 Sobic.002G122700 expressed protein -
18 Sobic.006G254800 expressed protein K13153: U11/U12 small nuclear ribonucleoprotein 25 kDa protein
19 Sobic.002G296300 expressed protein -
20 Sobic.003G344900 selT-like protein precursor, putative, expressed -


Gene co-expression network
sample Sobic001G524500 Sobic001G524500 Sobic005G176000 Sobic005G176000 Sobic001G524500--Sobic005G176000 Sobic004G103600 Sobic004G103600 Sobic001G524500--Sobic004G103600 Sobic009G228800 Sobic009G228800 Sobic001G524500--Sobic009G228800 Sobic006G148200 Sobic006G148200 Sobic001G524500--Sobic006G148200 Sobic003G248600 Sobic003G248600 Sobic001G524500--Sobic003G248600 Sobic002G113800 Sobic002G113800 Sobic001G524500--Sobic002G113800 Sobic004G072800 Sobic004G072800 Sobic001G524500--Sobic004G072800 Sobic005G086500 Sobic005G086500 Sobic001G524500--Sobic005G086500 Sobic001G512300 Sobic001G512300 Sobic001G524500--Sobic001G512300 Sobic002G296300 Sobic002G296300 Sobic005G176000--Sobic002G296300 Sobic005G176000--Sobic003G248600 Sobic003G220600 Sobic003G220600 Sobic005G176000--Sobic003G220600 Sobic001G403700 Sobic001G403700 Sobic005G176000--Sobic001G403700 Sobic010G253800 Sobic010G253800 Sobic005G176000--Sobic010G253800 Sobic003G115800 Sobic003G115800 Sobic005G176000--Sobic003G115800 Sobic001G283500 Sobic001G283500 Sobic005G176000--Sobic001G283500 Sobic001G434900 Sobic001G434900 Sobic005G176000--Sobic001G434900 Sobic007G186300 Sobic007G186300 Sobic005G176000--Sobic007G186300 Sobic007G118000 Sobic007G118000 Sobic004G103600--Sobic007G118000 Sobic007G019100 Sobic007G019100 Sobic004G103600--Sobic007G019100 Sobic001G342200 Sobic001G342200 Sobic004G103600--Sobic001G342200 Sobic001G367000 Sobic001G367000 Sobic004G103600--Sobic001G367000 Sobic007G045600 Sobic007G045600 Sobic004G103600--Sobic007G045600 Sobic004G103600--Sobic002G296300 Sobic004G103600--Sobic005G086500 Sobic003G273900 Sobic003G273900 Sobic004G103600--Sobic003G273900 Sobic001G054200 Sobic001G054200 Sobic004G103600--Sobic001G054200 Sobic001G073000 Sobic001G073000 Sobic009G228800--Sobic001G073000 Sobic004G212200 Sobic004G212200 Sobic009G228800--Sobic004G212200 Sobic007G203700 Sobic007G203700 Sobic009G228800--Sobic007G203700 Sobic003G015900 Sobic003G015900 Sobic009G228800--Sobic003G015900 Sobic010G000900 Sobic010G000900 Sobic009G228800--Sobic010G000900 Sobic009G228800--Sobic003G248600 Sobic009G228800--Sobic001G512300 Sobic004G356900 Sobic004G356900 Sobic009G228800--Sobic004G356900 Sobic002G393500 Sobic002G393500 Sobic009G228800--Sobic002G393500 Sobic004G274400 Sobic004G274400 Sobic006G148200--Sobic004G274400 Sobic001G085100 Sobic001G085100 Sobic006G148200--Sobic001G085100 Sobic006G034000 Sobic006G034000 Sobic006G148200--Sobic006G034000 Sobic001G323000 Sobic001G323000 Sobic006G148200--Sobic001G323000 Sobic009G228700 Sobic009G228700 Sobic006G148200--Sobic009G228700 Sobic001G033500 Sobic001G033500 Sobic006G148200--Sobic001G033500 Sobic001G206900 Sobic001G206900 Sobic006G148200--Sobic001G206900 Sobic006G148200--Sobic010G000900 Sobic001G048700 Sobic001G048700 Sobic006G148200--Sobic001G048700 Sobic003G248600--Sobic003G220600 Sobic003G248600--Sobic007G186300 Sobic003G248600--Sobic007G045600 Sobic003G248600--Sobic005G176000 Sobic004G321900 Sobic004G321900 Sobic003G248600--Sobic004G321900 Sobic003G248600--Sobic001G403700 Sobic009G146100 Sobic009G146100 Sobic003G248600--Sobic009G146100 Sobic003G248600--Sobic002G296300 Sobic003G248600--Sobic001G073000 Sobic010G073100 Sobic010G073100 Sobic002G113800--Sobic010G073100 Sobic003G259700 Sobic003G259700 Sobic002G113800--Sobic003G259700 Sobic002G113800--Sobic001G033500 Sobic001G010400 Sobic001G010400 Sobic002G113800--Sobic001G010400 Sobic010G046300 Sobic010G046300 Sobic002G113800--Sobic010G046300 Sobic010G151000 Sobic010G151000 Sobic002G113800--Sobic010G151000 Sobic006G114400 Sobic006G114400 Sobic002G113800--Sobic006G114400 Sobic007G142500 Sobic007G142500 Sobic002G113800--Sobic007G142500 Sobic006G217700 Sobic006G217700 Sobic002G113800--Sobic006G217700 Sobic001G067900 Sobic001G067900 Sobic004G072800--Sobic001G067900 Sobic003G350600 Sobic003G350600 Sobic004G072800--Sobic003G350600 Sobic003G007500 Sobic003G007500 Sobic004G072800--Sobic003G007500 Sobic002G313500 Sobic002G313500 Sobic004G072800--Sobic002G313500 Sobic004G072800--Sobic007G118000 Sobic001G522900 Sobic001G522900 Sobic004G072800--Sobic001G522900 Sobic002G281300 Sobic002G281300 Sobic004G072800--Sobic002G281300 Sobic001G429400 Sobic001G429400 Sobic004G072800--Sobic001G429400 Sobic003G045400 Sobic003G045400 Sobic004G072800--Sobic003G045400 Sobic005G086500--Sobic001G067900 Sobic001G323300 Sobic001G323300 Sobic005G086500--Sobic001G323300 Sobic005G086500--Sobic007G045600 Sobic005G086500--Sobic007G118000 Sobic005G086500--Sobic001G522900 Sobic005G086500--Sobic004G103600 Sobic005G086500--Sobic007G142500 Sobic001G458700 Sobic001G458700 Sobic005G086500--Sobic001G458700 Sobic010G188200 Sobic010G188200 Sobic005G086500--Sobic010G188200 Sobic001G091300 Sobic001G091300 Sobic001G512300--Sobic001G091300 Sobic006G101700 Sobic006G101700 Sobic001G512300--Sobic006G101700 Sobic001G512300--Sobic002G281300 Sobic001G512300--Sobic001G085100 Sobic009G207000 Sobic009G207000 Sobic001G512300--Sobic009G207000 Sobic001G360200 Sobic001G360200 Sobic001G512300--Sobic001G360200 Sobic009G123600 Sobic009G123600 Sobic001G512300--Sobic009G123600 Sobic004G066200 Sobic004G066200 Sobic001G512300--Sobic004G066200 Sobic001G512300--Sobic003G007500
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.