Gene annotation
Transcriptome id Sobic.003G274800.1
Synonym Sb03g032670, MPPBETA
Functional annotation mitochondrial-processing peptidase subunit, mitochondrial precursor, putative, expressed
UniProt C5XI82
Pfam PF05193 PF00675
Panther DB PTHR11851 PTHR11851:SF133
NCBI CDD -
KEGG Orthology K17732; PMPCB, mitochondrial-processing peptidase subunit beta
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G02090 : Insulinase (Peptidase family M16) protein
RAP-DB (Rice) LOC_Os01g51390.1 : mitochondrial-processing peptidase subunit, mitochondrial precursor, putative, expressed
MaizeGDB (Corn) Zm00025a038941
Brachypodium KQK09437
Barley HORVU3Hr1G067030.3
Wheat TraesCS3A02G250400 , TraesCS3D02G250800 , TraesCS3D02G250800 , TraesCS3B02G279900
Populus -


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cDNA sequences
Sobic.003G274800


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G212200 enhancer of rudimentary protein, putative, expressed -
2 Sobic.010G000900 spotted leaf 11, putative, expressed -
3 Sobic.003G261400 DUF292 domain containing protein, expressed -
4 Sobic.002G393500 expressed protein -
5 Sobic.001G283200 proteasome subunit, putative, expressed K03039: PSMD13, 26S proteasome regulatory subunit N9
6 Sobic.003G261500 lipase, putative, expressed -
7 Sobic.003G012200 tRNA synthetases class II domain containing protein, expressed K01876: aspartyl-tRNA synthetase
8 Sobic.003G077900 vacuolar protein sorting-associating protein 4B, putative, expressed K12196: vacuolar protein-sorting-associated protein 4
9 Sobic.001G047400 SNF7 domain containing protein, putative, expressed K12194: CHMP4, SNF7, charged multivesicular body protein 4
10 Sobic.007G168600 vesicle-associated membrane protein 727, putative, expressed K08511: vesicle-associated membrane protein 72
11 Sobic.003G344900 selT-like protein precursor, putative, expressed -
12 Sobic.006G244700 6,7-dimethyl-8-ribityllumazine synthase, chloroplast precursor, putative, expressed K00794: ribH, 6,7-dimethyl-8-ribityllumazine synthase
13 Sobic.001G085100 expressed protein -
14 Sobic.001G261436 - -
15 Sobic.004G321900 26S protease regulatory subunit 7, putative, expressed K03061: PSMC2, 26S proteasome regulatory subunit T1
16 Sobic.009G228800 dolichol phosphate-mannose biosynthesis regulatory protein, putative, expressed K09658: dolichol phosphate-mannose biosynthesis regulatory protein
17 Sobic.006G101700 ubiquitin carboxyl-terminal hydrolase domain containing protein, expressed K11842: ubiquitin carboxyl-terminal hydrolase 12/46
18 Sobic.003G362500 WD domain, G-beta repeat domain containing protein, expressed K10570: ERCC8, CKN1, DNA excision repair protein ERCC-8
19 Sobic.002G166900 ubiquitin-conjugating enzyme, putative, expressed K10580: UBE2N, BLU, ubiquitin-conjugating enzyme E2 N
20 Sobic.004G081800 Ubiquitin family domain containing protein, expressed K11885: DNA damage-inducible protein 1


Gene co-expression network
sample Sobic003G274800 Sobic003G274800 Sobic004G212200 Sobic004G212200 Sobic003G274800--Sobic004G212200 Sobic010G000900 Sobic010G000900 Sobic003G274800--Sobic010G000900 Sobic003G261400 Sobic003G261400 Sobic003G274800--Sobic003G261400 Sobic002G393500 Sobic002G393500 Sobic003G274800--Sobic002G393500 Sobic001G283200 Sobic001G283200 Sobic003G274800--Sobic001G283200 Sobic003G261500 Sobic003G261500 Sobic003G274800--Sobic003G261500 Sobic003G012200 Sobic003G012200 Sobic003G274800--Sobic003G012200 Sobic003G077900 Sobic003G077900 Sobic003G274800--Sobic003G077900 Sobic001G047400 Sobic001G047400 Sobic003G274800--Sobic001G047400 Sobic004G212200--Sobic002G393500 Sobic009G228800 Sobic009G228800 Sobic004G212200--Sobic009G228800 Sobic004G212200--Sobic003G261400 Sobic004G212200--Sobic003G274800 Sobic004G212200--Sobic010G000900 Sobic001G388200 Sobic001G388200 Sobic004G212200--Sobic001G388200 Sobic002G166900 Sobic002G166900 Sobic004G212200--Sobic002G166900 Sobic004G212200--Sobic003G261500 Sobic001G512300 Sobic001G512300 Sobic004G212200--Sobic001G512300 Sobic002G400000 Sobic002G400000 Sobic010G000900--Sobic002G400000 Sobic010G000900--Sobic003G012200 Sobic010G000900--Sobic001G047400 Sobic010G000900--Sobic003G261400 Sobic004G130900 Sobic004G130900 Sobic010G000900--Sobic004G130900 Sobic001G051200 Sobic001G051200 Sobic010G000900--Sobic001G051200 Sobic001G323000 Sobic001G323000 Sobic010G000900--Sobic001G323000 Sobic010G000900--Sobic001G388200 Sobic001G085100 Sobic001G085100 Sobic010G000900--Sobic001G085100 Sobic003G261400--Sobic001G283200 Sobic002G281300 Sobic002G281300 Sobic003G261400--Sobic002G281300 Sobic003G261400--Sobic003G261500 Sobic007G045600 Sobic007G045600 Sobic003G261400--Sobic007G045600 Sobic001G458700 Sobic001G458700 Sobic003G261400--Sobic001G458700 Sobic003G261400--Sobic004G130900 Sobic003G124800 Sobic003G124800 Sobic003G261400--Sobic003G124800 Sobic003G261400--Sobic001G051200 Sobic003G261400--Sobic010G000900 Sobic002G393500--Sobic004G212200 Sobic002G393500--Sobic003G274800 Sobic002G178601 Sobic002G178601 Sobic002G393500--Sobic002G178601 Sobic002G393500--Sobic009G228800 Sobic002G393500--Sobic010G000900 Sobic002G393500--Sobic001G047400 Sobic002G226900 Sobic002G226900 Sobic002G393500--Sobic002G226900 Sobic001G021300 Sobic001G021300 Sobic002G393500--Sobic001G021300 Sobic002G393500--Sobic003G261400 Sobic001G283200--Sobic001G458700 Sobic001G283200--Sobic003G261400 Sobic006G252200 Sobic006G252200 Sobic001G283200--Sobic006G252200 Sobic001G033500 Sobic001G033500 Sobic001G283200--Sobic001G033500 Sobic004G348900 Sobic004G348900 Sobic001G283200--Sobic004G348900 Sobic004G181900 Sobic004G181900 Sobic001G283200--Sobic004G181900 Sobic003G349300 Sobic003G349300 Sobic001G283200--Sobic003G349300 Sobic007G176200 Sobic007G176200 Sobic001G283200--Sobic007G176200 Sobic004G082900 Sobic004G082900 Sobic001G283200--Sobic004G082900 Sobic003G261500--Sobic003G261400 Sobic003G217400 Sobic003G217400 Sobic003G261500--Sobic003G217400 Sobic003G261500--Sobic010G000900 Sobic003G261500--Sobic001G283200 Sobic007G168600 Sobic007G168600 Sobic003G261500--Sobic007G168600 Sobic003G261500--Sobic001G051200 Sobic003G261500--Sobic004G212200 Sobic003G261500--Sobic003G124800 Sobic004G086600 Sobic004G086600 Sobic003G261500--Sobic004G086600 Sobic001G199100 Sobic001G199100 Sobic003G012200--Sobic001G199100 Sobic003G344900 Sobic003G344900 Sobic003G012200--Sobic003G344900 Sobic003G012200--Sobic010G000900 Sobic003G012200--Sobic001G085100 Sobic004G348300 Sobic004G348300 Sobic003G012200--Sobic004G348300 Sobic009G075800 Sobic009G075800 Sobic003G012200--Sobic009G075800 Sobic004G275700 Sobic004G275700 Sobic003G012200--Sobic004G275700 Sobic009G259400 Sobic009G259400 Sobic003G012200--Sobic009G259400 Sobic003G012200--Sobic001G047400 Sobic003G077900--Sobic002G400000 Sobic003G077900--Sobic007G168600 Sobic003G077900--Sobic003G217400 Sobic010G188100 Sobic010G188100 Sobic003G077900--Sobic010G188100 Sobic004G060600 Sobic004G060600 Sobic003G077900--Sobic004G060600 Sobic001G220400 Sobic001G220400 Sobic003G077900--Sobic001G220400 Sobic003G077900--Sobic004G348900 Sobic009G219900 Sobic009G219900 Sobic003G077900--Sobic009G219900 Sobic003G077900--Sobic004G130900 Sobic002G116900 Sobic002G116900 Sobic001G047400--Sobic002G116900 Sobic009G165800 Sobic009G165800 Sobic001G047400--Sobic009G165800 Sobic001G047400--Sobic010G000900 Sobic001G047400--Sobic001G085100 Sobic010G251000 Sobic010G251000 Sobic001G047400--Sobic010G251000 Sobic003G015900 Sobic003G015900 Sobic001G047400--Sobic003G015900 Sobic001G047400--Sobic001G051200 Sobic001G261436 Sobic001G261436 Sobic001G047400--Sobic001G261436 Sobic009G228700 Sobic009G228700 Sobic001G047400--Sobic009G228700
Octagon: transcription factors


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